RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 ZEB1P37275 1124 aaPredicted RBP15.21■□□□□ 0.03
TTC28-203ENST00000442232 ZNF428Q96B54 188 aa15.21■□□□□ 0.03
TTC28-203ENST00000442232 FAM89AQ96GI7 184 aa15.21■□□□□ 0.03
TTC28-203ENST00000442232 ISCA1Q9BUE6 129 aa15.21■□□□□ 0.03
TTC28-203ENST00000442232 RTFDC1Q9BY42 306 aaPredicted RBP15.21■□□□□ 0.03
TTC28-203ENST00000442232 ZNRF3Q9ULT6 936 aa15.21■□□□□ 0.03
TTC28-203ENST00000442232 ELL2O00472 640 aaPredicted RBP15.2■□□□□ 0.02
TTC28-203ENST00000442232 DDX58O95786 925 aaKnown RBP15.2■□□□□ 0.02
TTC28-203ENST00000442232 CCDC30Q5VVM6 783 aa15.2■□□□□ 0.02
TTC28-203ENST00000442232 MAP1SQ66K74 1059 aaPredicted RBP15.2■□□□□ 0.02
TTC28-203ENST00000442232 SLC51AQ86UW1 340 aa15.2■□□□□ 0.02
TTC28-203ENST00000442232 CNTROBQ8N137 903 aa15.2■□□□□ 0.02
TTC28-203ENST00000442232 CNTNAP1P78357 1384 aa15.2■□□□□ 0.02
TTC28-203ENST00000442232 LTBP1Q14766 1721 aa15.2■□□□□ 0.02
TTC28-203ENST00000442232 TNIP1Q15025 636 aa15.19■□□□□ 0.02
TTC28-203ENST00000442232 RTL5Q5HYW3 569 aaPredicted RBP15.19■□□□□ 0.02
TTC28-203ENST00000442232 USP50Q70EL3 339 aaPredicted RBP15.19■□□□□ 0.02
TTC28-203ENST00000442232 TRPM7Q96QT4 1865 aa15.18■□□□□ 0.02
TTC28-203ENST00000442232 IRS4O14654 1257 aaPredicted RBP15.18■□□□□ 0.02
TTC28-203ENST00000442232 ITGBL1O95965 494 aaPredicted RBP15.18■□□□□ 0.02
TTC28-203ENST00000442232 SCNN1DP51172 638 aa15.18■□□□□ 0.02
TTC28-203ENST00000442232 KIAA2012Q0VF49 1180 aa15.18■□□□□ 0.02
TTC28-203ENST00000442232 TRIM28Q13263 835 aaKnown RBP15.18■□□□□ 0.02
TTC28-203ENST00000442232 CIAPIN1Q6FI81 312 aa15.18■□□□□ 0.02
TTC28-203ENST00000442232 BCL2L13Q9BXK5 485 aa15.18■□□□□ 0.02
TTC28-203ENST00000442232 ADARB2Q9NS39 739 aaKnown RBP15.18■□□□□ 0.02
TTC28-203ENST00000442232 CDHR2Q9BYE9 1310 aa15.17■□□□□ 0.02
TTC28-203ENST00000442232 EPS15P42566 896 aa15.17■□□□□ 0.02
TTC28-203ENST00000442232 SF3B3Q15393 1217 aaKnown RBP15.17■□□□□ 0.02
TTC28-203ENST00000442232 AIDAQ96BJ3 306 aa15.17■□□□□ 0.02
TTC28-203ENST00000442232 MYD88Q99836 296 aa15.17■□□□□ 0.02
TTC28-203ENST00000442232 STK31Q9BXU1 1019 aa15.17■□□□□ 0.02
TTC28-203ENST00000442232 PHAXQ9H814 394 aaKnown RBP15.17■□□□□ 0.02
TTC28-203ENST00000442232 ABT1Q9ULW3 272 aaKnown RBP15.17■□□□□ 0.02
TTC28-203ENST00000442232 CXCL9Q07325 125 aa15.16■□□□□ 0.02
TTC28-203ENST00000442232 ZBTB38Q8NAP3 1195 aaPredicted RBP15.16■□□□□ 0.02
TTC28-203ENST00000442232 CCDC191Q8NCU4 936 aa15.16■□□□□ 0.02
TTC28-203ENST00000442232 EYA3Q99504 573 aa15.16■□□□□ 0.02
TTC28-203ENST00000442232 GPRC5DQ9NZD1 345 aa15.16■□□□□ 0.02
TTC28-203ENST00000442232 NSFL1CQ9UNZ2 370 aaKnown RBP15.16■□□□□ 0.02
TTC28-203ENST00000442232 DUOX1Q9NRD9 1551 aa15.15■□□□□ 0.02
TTC28-203ENST00000442232 C6orf229H3BNL8 230 aa15.15■□□□□ 0.02
TTC28-203ENST00000442232 RAD17O75943 681 aa15.15■□□□□ 0.02
TTC28-203ENST00000442232 GMPSP49915 693 aaPredicted RBP15.15■□□□□ 0.02
TTC28-203ENST00000442232 WASHC4Q2M389 1173 aa15.15■□□□□ 0.02
TTC28-203ENST00000442232 COL13A1Q5TAT6 717 aaPredicted RBP15.15■□□□□ 0.02
TTC28-203ENST00000442232 TNS4Q8IZW8 715 aa15.15■□□□□ 0.02
TTC28-203ENST00000442232 C8orf58Q8NAV2 365 aa15.15■□□□□ 0.02
TTC28-203ENST00000442232 CELF1Q92879 486 aaKnown RBP15.15■□□□□ 0.02
TTC28-203ENST00000442232 CWC25Q9NXE8 425 aaPredicted RBP15.15■□□□□ 0.02
TTC28-203ENST00000442232 MYH3P11055 1940 aa15.15■□□□□ 0.02
TTC28-203ENST00000442232 ANP32CO43423 234 aa15.14■□□□□ 0.01
TTC28-203ENST00000442232 NEXNQ0ZGT2 675 aa15.14■□□□□ 0.01
TTC28-203ENST00000442232 CCDC27Q2M243 656 aa15.14■□□□□ 0.01
TTC28-203ENST00000442232 DEFB115Q30KQ5 88 aa15.14■□□□□ 0.01
TTC28-203ENST00000442232 CCDC152Q4G0S7 254 aa15.14■□□□□ 0.01
TTC28-203ENST00000442232 PAXIP1Q6ZW49 1069 aaPredicted RBP15.14■□□□□ 0.01
TTC28-203ENST00000442232 MRS2Q9HD23 443 aa15.14■□□□□ 0.01
TTC28-203ENST00000442232 G3V3G9 751 aa15.13■□□□□ 0.01
TTC28-203ENST00000442232 PCCAP05165 728 aaPredicted RBP15.13■□□□□ 0.01
TTC28-203ENST00000442232 VEGFBP49765 207 aa15.13■□□□□ 0.01
TTC28-203ENST00000442232 RPS8P62241 208 aaKnown RBP15.13■□□□□ 0.01
TTC28-203ENST00000442232 DCAF8Q5TAQ9 597 aa15.13■□□□□ 0.01
TTC28-203ENST00000442232 TSR2Q969E8 191 aaKnown RBP15.13■□□□□ 0.01
TTC28-203ENST00000442232 METTL22Q9BUU2 404 aaPredicted RBP15.13■□□□□ 0.01
TTC28-203ENST00000442232 CACNA1FO60840 1977 aa15.13■□□□□ 0.01
TTC28-203ENST00000442232 RASSF10A6NK89 507 aa15.12■□□□□ 0.01
TTC28-203ENST00000442232 H7C1D1 291 aa15.12■□□□□ 0.01
TTC28-203ENST00000442232 PDE8AO60658 829 aa15.12■□□□□ 0.01
TTC28-203ENST00000442232 GPSM2P81274 684 aa15.12■□□□□ 0.01
TTC28-203ENST00000442232 ANKIB1Q9P2G1 1089 aa15.12■□□□□ 0.01
TTC28-203ENST00000442232 MAP3K2Q9Y2U5 619 aa15.12■□□□□ 0.01
TTC28-203ENST00000442232 PCNTO95613 3336 aa15.12■□□□□ 0.01
TTC28-203ENST00000442232 SPEF2Q9C093 1822 aa15.11■□□□□ 0.01
TTC28-203ENST00000442232 RIMBP2O15034 1052 aa15.11■□□□□ 0.01
TTC28-203ENST00000442232 TWISTNBQ3B726 338 aaPredicted RBP15.11■□□□□ 0.01
TTC28-203ENST00000442232 WWC1Q8IX03 1113 aa15.11■□□□□ 0.01
TTC28-203ENST00000442232 ZC3H12CQ9C0D7 883 aaKnown RBP15.11■□□□□ 0.01
TTC28-203ENST00000442232 DBNDD1Q9H9R9 158 aa15.11■□□□□ 0.01
TTC28-203ENST00000442232 IL16Q14005 1332 aa15.11■□□□□ 0.01
TTC28-203ENST00000442232 ECE2O60344 883 aa15.1■□□□□ 0.01
TTC28-203ENST00000442232 UFL1O94874 794 aa15.1■□□□□ 0.01
TTC28-203ENST00000442232 ECE1P42892 770 aa15.1■□□□□ 0.01
TTC28-203ENST00000442232 CCDC184Q52MB2 194 aa15.1■□□□□ 0.01
TTC28-203ENST00000442232 KSR2Q6VAB6 950 aa15.1■□□□□ 0.01
TTC28-203ENST00000442232 ANKRD18AQ8IVF6 992 aa15.1■□□□□ 0.01
TTC28-203ENST00000442232 TSPYL6Q8N831 410 aa15.1■□□□□ 0.01
TTC28-203ENST00000442232 CNOT7Q9UIV1 285 aaKnown RBP15.1■□□□□ 0.01
TTC28-203ENST00000442232 GGA1Q9UJY5 639 aa15.1■□□□□ 0.01
TTC28-203ENST00000442232 PI4KAP2A4QPH2 592 aa15.09■□□□□ 0.01
TTC28-203ENST00000442232 ZNF316A6NFI3 1004 aaPredicted RBP15.09■□□□□ 0.01
TTC28-203ENST00000442232 YDJCA8MPS7 323 aa15.09■□□□□ 0.01
TTC28-203ENST00000442232 TRAF5O00463 557 aa15.09■□□□□ 0.01
TTC28-203ENST00000442232 PSMD14O00487 310 aa15.09■□□□□ 0.01
TTC28-203ENST00000442232 RPS12P25398 132 aaKnown RBP15.09■□□□□ 0.01
TTC28-203ENST00000442232 MICALL2Q8IY33 904 aa15.09■□□□□ 0.01
TTC28-203ENST00000442232 PI4KAP1Q8N8J0 262 aa15.09■□□□□ 0.01
TTC28-203ENST00000442232 TBC1D16Q8TBP0 767 aa15.09■□□□□ 0.01
TTC28-203ENST00000442232 ZC3H15Q8WU90 426 aaKnown RBP15.09■□□□□ 0.01
TTC28-203ENST00000442232 CCDC85AQ96PX6 553 aaPredicted RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms