RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 RTL5Q5HYW3 569 aaPredicted RBP20.17■□□□□ 0.82
SEC13-210ENST00000428626 DDX46Q7L014 1031 aaKnown RBP20.17■□□□□ 0.82
SEC13-210ENST00000428626 PNMA8AQ86V59 439 aaPredicted RBP20.17■□□□□ 0.82
SEC13-210ENST00000428626 NIM1KQ8IY84 436 aa20.17■□□□□ 0.82
SEC13-210ENST00000428626 CNTROBQ8N137 903 aa20.17■□□□□ 0.82
SEC13-210ENST00000428626 LRRC37AA6NMS7 1700 aa20.16■□□□□ 0.82
SEC13-210ENST00000428626 FMR1Q06787 632 aaKnown RBP eCLIP20.16■□□□□ 0.82
SEC13-210ENST00000428626 CXCL9Q07325 125 aa20.16■□□□□ 0.82
SEC13-210ENST00000428626 DPP8Q6V1X1 898 aaPredicted RBP20.16■□□□□ 0.82
SEC13-210ENST00000428626 MPNDQ8N594 471 aa20.16■□□□□ 0.82
SEC13-210ENST00000428626 CELF1Q92879 486 aaKnown RBP20.16■□□□□ 0.82
SEC13-210ENST00000428626 CNTNAP1P78357 1384 aa20.16■□□□□ 0.82
SEC13-210ENST00000428626 GNAI1P63096 354 aa20.15■□□□□ 0.82
SEC13-210ENST00000428626 TRIM28Q13263 835 aaKnown RBP20.15■□□□□ 0.82
SEC13-210ENST00000428626 SF3B3Q15393 1217 aaKnown RBP20.15■□□□□ 0.82
SEC13-210ENST00000428626 TMEM88BA6NKF7 163 aa20.14■□□□□ 0.81
SEC13-210ENST00000428626 KIAA2012Q0VF49 1180 aa20.14■□□□□ 0.81
SEC13-210ENST00000428626 TSPYL6Q8N831 410 aa20.14■□□□□ 0.81
SEC13-210ENST00000428626 VPS33BQ9H267 617 aa20.14■□□□□ 0.81
SEC13-210ENST00000428626 ZNRF3Q9ULT6 936 aa20.14■□□□□ 0.81
SEC13-210ENST00000428626 TMX4Q9H1E5 349 aaPredicted RBP20.13■□□□□ 0.81
SEC13-210ENST00000428626 YDJCA8MPS7 323 aa20.12■□□□□ 0.81
SEC13-210ENST00000428626 LMOD1P29536 600 aaPredicted RBP20.12■□□□□ 0.81
SEC13-210ENST00000428626 RIC3Q7Z5B4 369 aa20.12■□□□□ 0.81
SEC13-210ENST00000428626 SUPT20HQ8NEM7 779 aa20.12■□□□□ 0.81
SEC13-210ENST00000428626 GPRC5DQ9NZD1 345 aa20.12■□□□□ 0.81
SEC13-210ENST00000428626 IRS4O14654 1257 aaPredicted RBP20.11■□□□□ 0.81
SEC13-210ENST00000428626 VEGFBP49765 207 aa20.11■□□□□ 0.81
SEC13-210ENST00000428626 RAD17O75943 681 aa20.1■□□□□ 0.81
SEC13-210ENST00000428626 GMPSP49915 693 aaPredicted RBP20.1■□□□□ 0.81
SEC13-210ENST00000428626 CALD1Q05682 793 aaKnown RBP20.1■□□□□ 0.81
SEC13-210ENST00000428626 JARID2Q92833 1246 aaPredicted RBP20.1■□□□□ 0.81
SEC13-210ENST00000428626 TSR2Q969E8 191 aaKnown RBP20.1■□□□□ 0.81
SEC13-210ENST00000428626 MYD88Q99836 296 aa20.1■□□□□ 0.81
SEC13-210ENST00000428626 SHTN1A0MZ66 631 aa20.09■□□□□ 0.81
SEC13-210ENST00000428626 TRAF5O00463 557 aa20.09■□□□□ 0.81
SEC13-210ENST00000428626 GPSM2P81274 684 aa20.09■□□□□ 0.81
SEC13-210ENST00000428626 GOLGA2Q08379 1002 aa20.09■□□□□ 0.81
SEC13-210ENST00000428626 USP50Q70EL3 339 aaPredicted RBP20.09■□□□□ 0.81
SEC13-210ENST00000428626 SEC31BQ9NQW1 1179 aa20.09■□□□□ 0.81
SEC13-210ENST00000428626 POLLQ9UGP5 575 aa20.09■□□□□ 0.81
SEC13-210ENST00000428626 CIAPIN1Q6FI81 312 aa20.08■□□□□ 0.81
SEC13-210ENST00000428626 TMC4Q7Z404 712 aa20.08■□□□□ 0.81
SEC13-210ENST00000428626 ZBTB38Q8NAP3 1195 aaPredicted RBP20.08■□□□□ 0.81
SEC13-210ENST00000428626 GPR101Q96P66 508 aaPredicted RBP20.08■□□□□ 0.81
SEC13-210ENST00000428626 RASSF10A6NK89 507 aa20.07■□□□□ 0.8
SEC13-210ENST00000428626 HIRAP54198 1017 aaPredicted RBP20.07■□□□□ 0.8
SEC13-210ENST00000428626 ADARB2Q9NS39 739 aaKnown RBP20.07■□□□□ 0.8
SEC13-210ENST00000428626 NSFL1CQ9UNZ2 370 aaKnown RBP20.07■□□□□ 0.8
SEC13-210ENST00000428626 FOXN1O15353 648 aa20.06■□□□□ 0.8
SEC13-210ENST00000428626 CST9Q5W186 159 aa20.06■□□□□ 0.8
SEC13-210ENST00000428626 WWC1Q8IX03 1113 aa20.06■□□□□ 0.8
SEC13-210ENST00000428626 METTL22Q9BUU2 404 aaPredicted RBP20.06■□□□□ 0.8
SEC13-210ENST00000428626 PCCAP05165 728 aaPredicted RBP20.05■□□□□ 0.8
SEC13-210ENST00000428626 RPS8P62241 208 aaKnown RBP20.05■□□□□ 0.8
SEC13-210ENST00000428626 CCDC30Q5VVM6 783 aa20.05■□□□□ 0.8
SEC13-210ENST00000428626 CCDC191Q8NCU4 936 aa20.05■□□□□ 0.8
SEC13-210ENST00000428626 TRPM4Q8TD43 1214 aa20.05■□□□□ 0.8
SEC13-210ENST00000428626 DBNDD1Q9H9R9 158 aa20.05■□□□□ 0.8
SEC13-210ENST00000428626 KCNQ5Q9NR82 932 aa20.05■□□□□ 0.8
SEC13-210ENST00000428626 TRPM7Q96QT4 1865 aa20.05■□□□□ 0.8
SEC13-210ENST00000428626 RIMBP2O15034 1052 aa20.04■□□□□ 0.8
SEC13-210ENST00000428626 CCDC27Q2M243 656 aa20.04■□□□□ 0.8
SEC13-210ENST00000428626 WASHC4Q2M389 1173 aa20.04■□□□□ 0.8
SEC13-210ENST00000428626 DEFB115Q30KQ5 88 aa20.04■□□□□ 0.8
SEC13-210ENST00000428626 G2E3Q7L622 706 aa20.04■□□□□ 0.8
SEC13-210ENST00000428626 TNS4Q8IZW8 715 aa20.04■□□□□ 0.8
SEC13-210ENST00000428626 MAP3K2Q9Y2U5 619 aa20.04■□□□□ 0.8
SEC13-210ENST00000428626 ZBTB12Q9Y330 459 aaPredicted RBP20.04■□□□□ 0.8
SEC13-210ENST00000428626 SCN9AQ15858 1988 aa20.03■□□□□ 0.8
SEC13-210ENST00000428626 PSMD14O00487 310 aa20.03■□□□□ 0.8
SEC13-210ENST00000428626 IGKV5-2P06315 115 aa20.03■□□□□ 0.8
SEC13-210ENST00000428626 TNIP1Q15025 636 aa20.03■□□□□ 0.8
SEC13-210ENST00000428626 TBC1D16Q8TBP0 767 aa20.03■□□□□ 0.8
SEC13-210ENST00000428626 CCDC85AQ96PX6 553 aaPredicted RBP20.03■□□□□ 0.8
SEC13-210ENST00000428626 CWC25Q9NXE8 425 aaPredicted RBP20.03■□□□□ 0.8
SEC13-210ENST00000428626 PGAP2Q9UHJ9 254 aa20.03■□□□□ 0.8
SEC13-210ENST00000428626 ABT1Q9ULW3 272 aaKnown RBP20.03■□□□□ 0.8
SEC13-210ENST00000428626 RTL9Q8NET4 1388 aa20.03■□□□□ 0.8
SEC13-210ENST00000428626 PI4KAP2A4QPH2 592 aa20.02■□□□□ 0.8
SEC13-210ENST00000428626 C6orf229H3BNL8 230 aa20.02■□□□□ 0.8
SEC13-210ENST00000428626 DOK7Q18PE1 504 aa20.02■□□□□ 0.8
SEC13-210ENST00000428626 PI4KAP1Q8N8J0 262 aa20.02■□□□□ 0.8
SEC13-210ENST00000428626 BCL2L13Q9BXK5 485 aa20.02■□□□□ 0.8
SEC13-210ENST00000428626 GLIS2Q9BZE0 524 aaPredicted RBP20.02■□□□□ 0.8
SEC13-210ENST00000428626 CNOT7Q9UIV1 285 aaKnown RBP20.02■□□□□ 0.8
SEC13-210ENST00000428626 CDHR2Q9BYE9 1310 aa20.02■□□□□ 0.79
SEC13-210ENST00000428626 WDR33Q9C0J8 1336 aaKnown RBP20.02■□□□□ 0.79
SEC13-210ENST00000428626 PDE8AO60658 829 aa20.01■□□□□ 0.79
SEC13-210ENST00000428626 KSR2Q6VAB6 950 aa20.01■□□□□ 0.79
SEC13-210ENST00000428626 WBP1LQ9NX94 342 aa20.01■□□□□ 0.79
SEC13-210ENST00000428626 DDX58O95786 925 aaKnown RBP20■□□□□ 0.79
SEC13-210ENST00000428626 EGFRP00533 1210 aa20■□□□□ 0.79
SEC13-210ENST00000428626 DLK2Q6UY11 383 aa20■□□□□ 0.79
SEC13-210ENST00000428626 MICALL2Q8IY33 904 aa20■□□□□ 0.79
SEC13-210ENST00000428626 PODXL2Q9NZ53 605 aa20■□□□□ 0.79
SEC13-210ENST00000428626 WTIPA6NIX2 430 aaPredicted RBP19.99■□□□□ 0.79
SEC13-210ENST00000428626 ECE2O60344 883 aa19.99■□□□□ 0.79
SEC13-210ENST00000428626 CWF19L2Q2TBE0 894 aaKnown RBP19.99■□□□□ 0.79
SEC13-210ENST00000428626 TWISTNBQ3B726 338 aaPredicted RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms