RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 SLC12A7Q9Y666 1083 aa9.87□□□□□ -0.83
UBR4-206ENST00000419533 ARHGAP23Q9P227 1491 aa9.86□□□□□ -0.83
UBR4-206ENST00000419533 NEXMIFQ5QGS0 1516 aa9.86□□□□□ -0.83
UBR4-206ENST00000419533 ARHGEF25Q86VW2 580 aa9.86□□□□□ -0.83
UBR4-206ENST00000419533 ERCC4Q92889 916 aaPredicted RBP9.86□□□□□ -0.83
UBR4-206ENST00000419533 MBIPQ9NS73 344 aa9.86□□□□□ -0.83
UBR4-206ENST00000419533 KIF24Q5T7B8 1368 aa9.86□□□□□ -0.83
UBR4-206ENST00000419533 ATP5J2-PTCD1G3V325 749 aa9.86□□□□□ -0.83
UBR4-206ENST00000419533 BACH2Q9BYV9 841 aa9.86□□□□□ -0.83
UBR4-206ENST00000419533 UBE3BQ7Z3V4 1068 aa9.86□□□□□ -0.83
UBR4-206ENST00000419533 RAB34Q9BZG1 259 aa9.86□□□□□ -0.83
UBR4-206ENST00000419533 PPP1R12BO60237 982 aaPredicted RBP9.86□□□□□ -0.83
UBR4-206ENST00000419533 VWDEQ8N2E2 1590 aa9.85□□□□□ -0.83
UBR4-206ENST00000419533 PDE4BQ07343 736 aa9.85□□□□□ -0.83
UBR4-206ENST00000419533 HSP90B2PQ58FF3 399 aa9.85□□□□□ -0.83
UBR4-206ENST00000419533 CATIPQ7Z7H3 387 aa9.85□□□□□ -0.83
UBR4-206ENST00000419533 SCLT1Q96NL6 688 aa9.85□□□□□ -0.83
UBR4-206ENST00000419533 NYXQ9GZU5 481 aa9.85□□□□□ -0.83
UBR4-206ENST00000419533 SH2B1Q9NRF2 756 aaPredicted RBP9.85□□□□□ -0.83
UBR4-206ENST00000419533 ECHDC1Q9NTX5 307 aa9.85□□□□□ -0.83
UBR4-206ENST00000419533 HDAC9Q9UKV0 1011 aa9.85□□□□□ -0.83
UBR4-206ENST00000419533 CIZ1Q9ULV3 898 aaPredicted RBP9.85□□□□□ -0.83
UBR4-206ENST00000419533 PRR36Q9H6K5 1346 aa9.85□□□□□ -0.83
UBR4-206ENST00000419533 PI4KAP2A4QPH2 592 aa9.85□□□□□ -0.83
UBR4-206ENST00000419533 ANKRD18AQ8IVF6 992 aa9.85□□□□□ -0.83
UBR4-206ENST00000419533 PI4KAP1Q8N8J0 262 aa9.85□□□□□ -0.83
UBR4-206ENST00000419533 FEZ1Q99689 392 aa9.85□□□□□ -0.83
UBR4-206ENST00000419533 WDR78Q5VTH9 848 aa9.85□□□□□ -0.83
UBR4-206ENST00000419533 ZGPATQ8N5A5 531 aaKnown RBP9.85□□□□□ -0.83
UBR4-206ENST00000419533 VPS72Q15906 364 aa9.85□□□□□ -0.83
UBR4-206ENST00000419533 CCDC12Q8WUD4 166 aaPredicted RBP9.85□□□□□ -0.83
UBR4-206ENST00000419533 SETBP1Q9Y6X0 1596 aa9.85□□□□□ -0.83
UBR4-206ENST00000419533 DDX11Q96FC9 970 aa9.85□□□□□ -0.83
UBR4-206ENST00000419533 NLRP3Q96P20 1036 aa9.85□□□□□ -0.83
UBR4-206ENST00000419533 TMEM266Q2M3C6 531 aa9.84□□□□□ -0.83
UBR4-206ENST00000419533 ADAMTSL3P82987 1691 aa9.84□□□□□ -0.83
UBR4-206ENST00000419533 MAP3K5Q99683 1374 aa9.84□□□□□ -0.83
UBR4-206ENST00000419533 ERVV-2B6SEH9 535 aa9.84□□□□□ -0.83
UBR4-206ENST00000419533 IFIT3O14879 490 aaKnown RBP9.84□□□□□ -0.83
UBR4-206ENST00000419533 KIF5BP33176 963 aa9.84□□□□□ -0.83
UBR4-206ENST00000419533 PRIM1P49642 420 aaKnown RBP9.84□□□□□ -0.83
UBR4-206ENST00000419533 SSRP1Q08945 709 aaKnown RBP9.84□□□□□ -0.83
UBR4-206ENST00000419533 GNPATO15228 680 aa9.84□□□□□ -0.83
UBR4-206ENST00000419533 PPP4R3BQ5MIZ7 849 aa9.84□□□□□ -0.83
UBR4-206ENST00000419533 MPHOSPH6Q99547 160 aaKnown RBP9.84□□□□□ -0.83
UBR4-206ENST00000419533 CRNKL1Q9BZJ0 848 aaKnown RBP9.84□□□□□ -0.83
UBR4-206ENST00000419533 INSRP06213 1382 aa9.84□□□□□ -0.83
UBR4-206ENST00000419533 SMTNL1A8MU46 457 aa9.83□□□□□ -0.84
UBR4-206ENST00000419533 HMGN5P82970 282 aaKnown RBP9.83□□□□□ -0.84
UBR4-206ENST00000419533 NOM1Q5C9Z4 860 aaKnown RBP9.83□□□□□ -0.84
UBR4-206ENST00000419533 FAM83GA6ND36 823 aa9.83□□□□□ -0.84
UBR4-206ENST00000419533 GOLGA8AA7E2F4 631 aa9.83□□□□□ -0.84
UBR4-206ENST00000419533 GOLGA8BA8MQT2 603 aa9.83□□□□□ -0.84
UBR4-206ENST00000419533 ERLIN2O94905 339 aa9.83□□□□□ -0.84
UBR4-206ENST00000419533 TRIM37O94972 964 aa9.83□□□□□ -0.84
UBR4-206ENST00000419533 POTEJP0CG39 1038 aa9.83□□□□□ -0.84
UBR4-206ENST00000419533 FBLN1P23142 703 aa9.83□□□□□ -0.84
UBR4-206ENST00000419533 ZNF771Q7L3S4 317 aaPredicted RBP9.83□□□□□ -0.84
UBR4-206ENST00000419533 NUP62CLQ9H1M0 184 aa9.83□□□□□ -0.84
UBR4-206ENST00000419533 GOLIM4O00461 696 aa9.83□□□□□ -0.84
UBR4-206ENST00000419533 TRIM27P14373 513 aa9.83□□□□□ -0.84
UBR4-206ENST00000419533 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.83□□□□□ -0.843e-12■■■□□ 16.5
UBR4-206ENST00000419533 CCDC194A0A1B0GVG4 234 aa9.83□□□□□ -0.84
UBR4-206ENST00000419533 BAG4O95429 457 aaKnown RBP9.83□□□□□ -0.84
UBR4-206ENST00000419533 UTP14AQ9BVJ6 771 aaKnown RBP9.83□□□□□ -0.84
UBR4-206ENST00000419533 MED14O60244 1454 aa9.83□□□□□ -0.84
UBR4-206ENST00000419533 NPC1L1Q9UHC9 1359 aa9.83□□□□□ -0.84
UBR4-206ENST00000419533 RNMTO43148 476 aaKnown RBP9.82□□□□□ -0.84
UBR4-206ENST00000419533 ALDH1L1O75891 902 aa9.82□□□□□ -0.84
UBR4-206ENST00000419533 C8orf76Q96K31 380 aa9.82□□□□□ -0.84
UBR4-206ENST00000419533 CCDC178Q5BJE1 867 aa9.82□□□□□ -0.84
UBR4-206ENST00000419533 CCDC83Q8IWF9 413 aa9.82□□□□□ -0.84
UBR4-206ENST00000419533 XAGE3Q8WTP9 111 aa9.82□□□□□ -0.84
UBR4-206ENST00000419533 SOS2Q07890 1332 aaPredicted RBP9.82□□□□□ -0.84
UBR4-206ENST00000419533 TMEM131LA2VDJ0 1609 aa9.82□□□□□ -0.84
UBR4-206ENST00000419533 NLRP5P59047 1200 aa9.82□□□□□ -0.84
UBR4-206ENST00000419533 ARHGAP45Q92619 1136 aa9.82□□□□□ -0.84
UBR4-206ENST00000419533 TSG101Q99816 390 aa9.82□□□□□ -0.84
UBR4-206ENST00000419533 CARD14Q9BXL6 1004 aa9.82□□□□□ -0.84
UBR4-206ENST00000419533 KAT14Q9H8E8 782 aa9.82□□□□□ -0.84
UBR4-206ENST00000419533 SEPT11Q9NVA2 429 aaKnown RBP9.82□□□□□ -0.84
UBR4-206ENST00000419533 CCDC87Q9NVE4 849 aa9.82□□□□□ -0.84
UBR4-206ENST00000419533 CHPF2Q9P2E5 772 aa9.82□□□□□ -0.84
UBR4-206ENST00000419533 TSPY2A6NKD2 308 aa9.82□□□□□ -0.84
UBR4-206ENST00000419533 NIP7Q9Y221 180 aaKnown RBP eCLIP9.82□□□□□ -0.84
UBR4-206ENST00000419533 KIF20AO95235 890 aa9.81□□□□□ -0.84
UBR4-206ENST00000419533 TPTE2Q6XPS3 522 aa9.81□□□□□ -0.84
UBR4-206ENST00000419533 MFSD6Q6ZSS7 791 aa9.81□□□□□ -0.84
UBR4-206ENST00000419533 ZNF804AQ7Z570 1209 aa9.81□□□□□ -0.84
UBR4-206ENST00000419533 OGFOD1Q8N543 542 aa9.81□□□□□ -0.84
UBR4-206ENST00000419533 FBXO3Q9UK99 471 aa9.81□□□□□ -0.84
UBR4-206ENST00000419533 NFATC2IPQ8NCF5 419 aa9.81□□□□□ -0.84
UBR4-206ENST00000419533 UPF3BQ9BZI7 483 aaKnown RBP9.81□□□□□ -0.84
UBR4-206ENST00000419533 BLMP54132 1417 aaPredicted RBP9.81□□□□□ -0.84
UBR4-206ENST00000419533 TRAF1Q13077 416 aa9.81□□□□□ -0.84
UBR4-206ENST00000419533 COPS6Q7L5N1 327 aa9.81□□□□□ -0.84
UBR4-206ENST00000419533 CCDC125Q86Z20 511 aa9.81□□□□□ -0.84
UBR4-206ENST00000419533 AATKQ6ZMQ8 1374 aa9.81□□□□□ -0.84
UBR4-206ENST00000419533 CHMP4BP1P59074 171 aa9.81□□□□□ -0.84
UBR4-206ENST00000419533 C16orf71Q8IYS4 520 aaPredicted RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms