RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 EIF6P56537 245 aaKnown RBP16.2■□□□□ 0.18
NCKIPSD-203ENST00000415281 GRAPQ13588 217 aa16.2■□□□□ 0.18
NCKIPSD-203ENST00000415281 SF3B3Q15393 1217 aaKnown RBP16.2■□□□□ 0.18
NCKIPSD-203ENST00000415281 PNMA8AQ86V59 439 aaPredicted RBP16.2■□□□□ 0.18
NCKIPSD-203ENST00000415281 GRAPLQ8TC17 118 aaPredicted RBP16.2■□□□□ 0.18
NCKIPSD-203ENST00000415281 CELF1Q92879 486 aaKnown RBP16.2■□□□□ 0.18
NCKIPSD-203ENST00000415281 VPS33BQ9H267 617 aa16.2■□□□□ 0.18
NCKIPSD-203ENST00000415281 CLEC11AQ9Y240 323 aa16.2■□□□□ 0.18
NCKIPSD-203ENST00000415281 YDJCA8MPS7 323 aa16.19■□□□□ 0.18
NCKIPSD-203ENST00000415281 ELL2O00472 640 aaPredicted RBP16.19■□□□□ 0.18
NCKIPSD-203ENST00000415281 PPIP5K2O43314 1243 aa16.19■□□□□ 0.18
NCKIPSD-203ENST00000415281 VEGFBP49765 207 aa16.19■□□□□ 0.18
NCKIPSD-203ENST00000415281 TMEM88BA6NKF7 163 aa16.18■□□□□ 0.18
NCKIPSD-203ENST00000415281 KIAA2012Q0VF49 1180 aa16.18■□□□□ 0.18
NCKIPSD-203ENST00000415281 MPNDQ8N594 471 aa16.18■□□□□ 0.18
NCKIPSD-203ENST00000415281 TSPYL6Q8N831 410 aa16.18■□□□□ 0.18
NCKIPSD-203ENST00000415281 IFT57Q9NWB7 429 aa16.18■□□□□ 0.18
NCKIPSD-203ENST00000415281 HYPKQ9NX55 129 aa16.18■□□□□ 0.18
NCKIPSD-203ENST00000415281 ZNRF3Q9ULT6 936 aa16.18■□□□□ 0.18
NCKIPSD-203ENST00000415281 SHTN1A0MZ66 631 aa16.17■□□□□ 0.18
NCKIPSD-203ENST00000415281 HIRAP54198 1017 aaPredicted RBP16.17■□□□□ 0.18
NCKIPSD-203ENST00000415281 RTL5Q5HYW3 569 aaPredicted RBP16.17■□□□□ 0.18
NCKIPSD-203ENST00000415281 CST9Q5W186 159 aa16.17■□□□□ 0.18
NCKIPSD-203ENST00000415281 DPP8Q6V1X1 898 aaPredicted RBP16.17■□□□□ 0.18
NCKIPSD-203ENST00000415281 DDX46Q7L014 1031 aaKnown RBP16.17■□□□□ 0.18
NCKIPSD-203ENST00000415281 GPRC5DQ9NZD1 345 aa16.17■□□□□ 0.18
NCKIPSD-203ENST00000415281 TRPM7Q96QT4 1865 aa16.16■□□□□ 0.18
NCKIPSD-203ENST00000415281 RASSF10A6NK89 507 aa16.16■□□□□ 0.18
NCKIPSD-203ENST00000415281 NIM1KQ8IY84 436 aa16.16■□□□□ 0.18
NCKIPSD-203ENST00000415281 PGAP2Q9UHJ9 254 aa16.16■□□□□ 0.18
NCKIPSD-203ENST00000415281 TRAF5O00463 557 aa16.15■□□□□ 0.18
NCKIPSD-203ENST00000415281 FOXN1O15353 648 aa16.15■□□□□ 0.18
NCKIPSD-203ENST00000415281 GMPSP49915 693 aaPredicted RBP16.15■□□□□ 0.18
NCKIPSD-203ENST00000415281 GNAI1P63096 354 aa16.15■□□□□ 0.18
NCKIPSD-203ENST00000415281 USP50Q70EL3 339 aaPredicted RBP16.15■□□□□ 0.18
NCKIPSD-203ENST00000415281 JARID2Q92833 1246 aaPredicted RBP16.15■□□□□ 0.18
NCKIPSD-203ENST00000415281 KCNQ5Q9NR82 932 aa16.15■□□□□ 0.18
NCKIPSD-203ENST00000415281 POLLQ9UGP5 575 aa16.15■□□□□ 0.18
NCKIPSD-203ENST00000415281 IRS4O14654 1257 aaPredicted RBP16.14■□□□□ 0.17
NCKIPSD-203ENST00000415281 RAD17O75943 681 aa16.14■□□□□ 0.17
NCKIPSD-203ENST00000415281 GPSM2P81274 684 aa16.14■□□□□ 0.17
NCKIPSD-203ENST00000415281 SUPT20HQ8NEM7 779 aa16.14■□□□□ 0.17
NCKIPSD-203ENST00000415281 SEC31BQ9NQW1 1179 aa16.14■□□□□ 0.17
NCKIPSD-203ENST00000415281 SCN9AQ15858 1988 aa16.14■□□□□ 0.17
NCKIPSD-203ENST00000415281 GPR101Q96P66 508 aaPredicted RBP16.13■□□□□ 0.17
NCKIPSD-203ENST00000415281 DEFB115Q30KQ5 88 aa16.12■□□□□ 0.17
NCKIPSD-203ENST00000415281 CIAPIN1Q6FI81 312 aa16.12■□□□□ 0.17
NCKIPSD-203ENST00000415281 DLK2Q6UY11 383 aa16.12■□□□□ 0.17
NCKIPSD-203ENST00000415281 RIC3Q7Z5B4 369 aa16.12■□□□□ 0.17
NCKIPSD-203ENST00000415281 ZBTB38Q8NAP3 1195 aaPredicted RBP16.12■□□□□ 0.17
NCKIPSD-203ENST00000415281 TSR2Q969E8 191 aaKnown RBP16.12■□□□□ 0.17
NCKIPSD-203ENST00000415281 MYD88Q99836 296 aa16.12■□□□□ 0.17
NCKIPSD-203ENST00000415281 ADARB2Q9NS39 739 aaKnown RBP16.12■□□□□ 0.17
NCKIPSD-203ENST00000415281 WBP1LQ9NX94 342 aa16.12■□□□□ 0.17
NCKIPSD-203ENST00000415281 POLR2AP24928 1970 aaKnown RBP16.12■□□□□ 0.17
NCKIPSD-203ENST00000415281 THSD7BQ9C0I4 1608 aa16.12■□□□□ 0.17
NCKIPSD-203ENST00000415281 WTIPA6NIX2 430 aaPredicted RBP16.11■□□□□ 0.17
NCKIPSD-203ENST00000415281 EGFRP00533 1210 aa16.11■□□□□ 0.17
NCKIPSD-203ENST00000415281 IGKV5-2P06315 115 aa16.11■□□□□ 0.17
NCKIPSD-203ENST00000415281 LMOD1P29536 600 aaPredicted RBP16.11■□□□□ 0.17
NCKIPSD-203ENST00000415281 RPS8P62241 208 aaKnown RBP16.11■□□□□ 0.17
NCKIPSD-203ENST00000415281 G2E3Q7L622 706 aa16.11■□□□□ 0.17
NCKIPSD-203ENST00000415281 TMC4Q7Z404 712 aa16.11■□□□□ 0.17
NCKIPSD-203ENST00000415281 TRPM4Q8TD43 1214 aa16.11■□□□□ 0.17
NCKIPSD-203ENST00000415281 NSFL1CQ9UNZ2 370 aaKnown RBP16.11■□□□□ 0.17
NCKIPSD-203ENST00000415281 ZBTB12Q9Y330 459 aaPredicted RBP16.11■□□□□ 0.17
NCKIPSD-203ENST00000415281 RTL9Q8NET4 1388 aa16.11■□□□□ 0.17
NCKIPSD-203ENST00000415281 RIMBP2O15034 1052 aa16.1■□□□□ 0.17
NCKIPSD-203ENST00000415281 WWC1Q8IX03 1113 aa16.1■□□□□ 0.17
NCKIPSD-203ENST00000415281 TNS4Q8IZW8 715 aa16.1■□□□□ 0.17
NCKIPSD-203ENST00000415281 TBC1D16Q8TBP0 767 aa16.1■□□□□ 0.17
NCKIPSD-203ENST00000415281 METTL22Q9BUU2 404 aaPredicted RBP16.1■□□□□ 0.17
NCKIPSD-203ENST00000415281 WDR33Q9C0J8 1336 aaKnown RBP16.1■□□□□ 0.17
NCKIPSD-203ENST00000415281 PCCAP05165 728 aaPredicted RBP16.09■□□□□ 0.17
NCKIPSD-203ENST00000415281 CCDC27Q2M243 656 aa16.09■□□□□ 0.17
NCKIPSD-203ENST00000415281 WASHC4Q2M389 1173 aa16.09■□□□□ 0.17
NCKIPSD-203ENST00000415281 CCDC191Q8NCU4 936 aa16.09■□□□□ 0.17
NCKIPSD-203ENST00000415281 GLIS2Q9BZE0 524 aaPredicted RBP16.09■□□□□ 0.17
NCKIPSD-203ENST00000415281 TMX4Q9H1E5 349 aaPredicted RBP16.09■□□□□ 0.17
NCKIPSD-203ENST00000415281 DBNDD1Q9H9R9 158 aa16.09■□□□□ 0.17
NCKIPSD-203ENST00000415281 CNOT7Q9UIV1 285 aaKnown RBP16.09■□□□□ 0.17
NCKIPSD-203ENST00000415281 ZNF646O15015 1829 aaPredicted RBP16.08■□□□□ 0.17
NCKIPSD-203ENST00000415281 PSMD14O00487 310 aa16.08■□□□□ 0.16
NCKIPSD-203ENST00000415281 DOK7Q18PE1 504 aa16.08■□□□□ 0.16
NCKIPSD-203ENST00000415281 PODXL2Q9NZ53 605 aa16.08■□□□□ 0.16
NCKIPSD-203ENST00000415281 CALD1Q05682 793 aaKnown RBP16.07■□□□□ 0.16
NCKIPSD-203ENST00000415281 GOLGA2Q08379 1002 aa16.07■□□□□ 0.16
NCKIPSD-203ENST00000415281 TNIP1Q15025 636 aa16.07■□□□□ 0.16
NCKIPSD-203ENST00000415281 MAP3K2Q9Y2U5 619 aa16.07■□□□□ 0.16
NCKIPSD-203ENST00000415281 TLL2Q9Y6L7 1015 aa16.07■□□□□ 0.16
NCKIPSD-203ENST00000415281 CDHR2Q9BYE9 1310 aa16.07■□□□□ 0.16
NCKIPSD-203ENST00000415281 PSME4Q14997 1843 aa16.07■□□□□ 0.16
NCKIPSD-203ENST00000415281 PI4KAP2A4QPH2 592 aa16.06■□□□□ 0.16
NCKIPSD-203ENST00000415281 PDE8AO60658 829 aa16.06■□□□□ 0.16
NCKIPSD-203ENST00000415281 CCDC30Q5VVM6 783 aa16.06■□□□□ 0.16
NCKIPSD-203ENST00000415281 CYP4F22Q6NT55 531 aa16.06■□□□□ 0.16
NCKIPSD-203ENST00000415281 KSR2Q6VAB6 950 aa16.06■□□□□ 0.16
NCKIPSD-203ENST00000415281 SAMD7Q7Z3H4 446 aa16.06■□□□□ 0.16
NCKIPSD-203ENST00000415281 PI4KAP1Q8N8J0 262 aa16.06■□□□□ 0.16
NCKIPSD-203ENST00000415281 DPF2Q92785 391 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms