RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 GRIPAP1Q4V328 841 aa17.14■□□□□ 0.33
RPF1-201ENST00000370654 PNMA8AQ86V59 439 aaPredicted RBP17.14■□□□□ 0.33
RPF1-201ENST00000370654 GRAPLQ8TC17 118 aaPredicted RBP17.14■□□□□ 0.33
RPF1-201ENST00000370654 DBF4Q9UBU7 674 aaPredicted RBP17.14■□□□□ 0.33
RPF1-201ENST00000370654 DUOX1Q9NRD9 1551 aa17.13■□□□□ 0.33
RPF1-201ENST00000370654 TMEM88BA6NKF7 163 aa17.13■□□□□ 0.33
RPF1-201ENST00000370654 CXCL9Q07325 125 aa17.13■□□□□ 0.33
RPF1-201ENST00000370654 C8orf58Q8NAV2 365 aa17.13■□□□□ 0.33
RPF1-201ENST00000370654 CELF1Q92879 486 aaKnown RBP17.13■□□□□ 0.33
RPF1-201ENST00000370654 VEGFBP49765 207 aa17.12■□□□□ 0.33
RPF1-201ENST00000370654 DPP8Q6V1X1 898 aaPredicted RBP17.12■□□□□ 0.33
RPF1-201ENST00000370654 DDX46Q7L014 1031 aaKnown RBP17.12■□□□□ 0.33
RPF1-201ENST00000370654 MPNDQ8N594 471 aa17.12■□□□□ 0.33
RPF1-201ENST00000370654 SHTN1A0MZ66 631 aa17.11■□□□□ 0.33
RPF1-201ENST00000370654 IFT57Q9NWB7 429 aa17.11■□□□□ 0.33
RPF1-201ENST00000370654 HYPKQ9NX55 129 aa17.11■□□□□ 0.33
RPF1-201ENST00000370654 ZNRF3Q9ULT6 936 aa17.11■□□□□ 0.33
RPF1-201ENST00000370654 YDJCA8MPS7 323 aa17.1■□□□□ 0.33
RPF1-201ENST00000370654 TRAF5O00463 557 aa17.1■□□□□ 0.33
RPF1-201ENST00000370654 LMOD1P29536 600 aaPredicted RBP17.1■□□□□ 0.33
RPF1-201ENST00000370654 KIAA2012Q0VF49 1180 aa17.1■□□□□ 0.33
RPF1-201ENST00000370654 TSPYL6Q8N831 410 aa17.1■□□□□ 0.33
RPF1-201ENST00000370654 JARID2Q92833 1246 aaPredicted RBP17.1■□□□□ 0.33
RPF1-201ENST00000370654 RAD17O75943 681 aa17.09■□□□□ 0.33
RPF1-201ENST00000370654 GMPSP49915 693 aaPredicted RBP17.09■□□□□ 0.33
RPF1-201ENST00000370654 SF3B3Q15393 1217 aaKnown RBP17.09■□□□□ 0.33
RPF1-201ENST00000370654 GPRC5DQ9NZD1 345 aa17.09■□□□□ 0.33
RPF1-201ENST00000370654 LRRC37AA6NMS7 1700 aa17.09■□□□□ 0.33
RPF1-201ENST00000370654 FOXN1O15353 648 aa17.08■□□□□ 0.32
RPF1-201ENST00000370654 TNS4Q8IZW8 715 aa17.08■□□□□ 0.32
RPF1-201ENST00000370654 SUPT20HQ8NEM7 779 aa17.08■□□□□ 0.32
RPF1-201ENST00000370654 GPR101Q96P66 508 aaPredicted RBP17.08■□□□□ 0.32
RPF1-201ENST00000370654 TMX4Q9H1E5 349 aaPredicted RBP17.08■□□□□ 0.32
RPF1-201ENST00000370654 VPS33BQ9H267 617 aa17.08■□□□□ 0.32
RPF1-201ENST00000370654 IRS4O14654 1257 aaPredicted RBP17.07■□□□□ 0.32
RPF1-201ENST00000370654 CAPN15O75808 1086 aa17.07■□□□□ 0.32
RPF1-201ENST00000370654 HIRAP54198 1017 aaPredicted RBP17.07■□□□□ 0.32
RPF1-201ENST00000370654 GNAI1P63096 354 aa17.07■□□□□ 0.32
RPF1-201ENST00000370654 GPSM2P81274 684 aa17.07■□□□□ 0.32
RPF1-201ENST00000370654 TRIM28Q13263 835 aaKnown RBP17.07■□□□□ 0.32
RPF1-201ENST00000370654 CST9Q5W186 159 aa17.07■□□□□ 0.32
RPF1-201ENST00000370654 USP50Q70EL3 339 aaPredicted RBP17.07■□□□□ 0.32
RPF1-201ENST00000370654 RIC3Q7Z5B4 369 aa17.07■□□□□ 0.32
RPF1-201ENST00000370654 MYD88Q99836 296 aa17.07■□□□□ 0.32
RPF1-201ENST00000370654 SEC31BQ9NQW1 1179 aa17.07■□□□□ 0.32
RPF1-201ENST00000370654 POLLQ9UGP5 575 aa17.07■□□□□ 0.32
RPF1-201ENST00000370654 RASSF10A6NK89 507 aa17.06■□□□□ 0.32
RPF1-201ENST00000370654 CIAPIN1Q6FI81 312 aa17.06■□□□□ 0.32
RPF1-201ENST00000370654 TSR2Q969E8 191 aaKnown RBP17.06■□□□□ 0.32
RPF1-201ENST00000370654 KCNQ5Q9NR82 932 aa17.06■□□□□ 0.32
RPF1-201ENST00000370654 RIMBP2O15034 1052 aa17.05■□□□□ 0.32
RPF1-201ENST00000370654 TRPM4Q8TD43 1214 aa17.05■□□□□ 0.32
RPF1-201ENST00000370654 NSFL1CQ9UNZ2 370 aaKnown RBP17.05■□□□□ 0.32
RPF1-201ENST00000370654 ZBTB12Q9Y330 459 aaPredicted RBP17.05■□□□□ 0.32
RPF1-201ENST00000370654 GOLGA2Q08379 1002 aa17.04■□□□□ 0.32
RPF1-201ENST00000370654 DEFB115Q30KQ5 88 aa17.04■□□□□ 0.32
RPF1-201ENST00000370654 DLK2Q6UY11 383 aa17.04■□□□□ 0.32
RPF1-201ENST00000370654 ZBTB38Q8NAP3 1195 aaPredicted RBP17.04■□□□□ 0.32
RPF1-201ENST00000370654 DBNDD1Q9H9R9 158 aa17.04■□□□□ 0.32
RPF1-201ENST00000370654 ADARB2Q9NS39 739 aaKnown RBP17.04■□□□□ 0.32
RPF1-201ENST00000370654 ABT1Q9ULW3 272 aaKnown RBP17.04■□□□□ 0.32
RPF1-201ENST00000370654 DOK7Q18PE1 504 aa17.03■□□□□ 0.32
RPF1-201ENST00000370654 CCDC85AQ96PX6 553 aaPredicted RBP17.03■□□□□ 0.32
RPF1-201ENST00000370654 GLIS2Q9BZE0 524 aaPredicted RBP17.03■□□□□ 0.32
RPF1-201ENST00000370654 RPS8P62241 208 aaKnown RBP17.02■□□□□ 0.32
RPF1-201ENST00000370654 TMC4Q7Z404 712 aa17.02■□□□□ 0.32
RPF1-201ENST00000370654 WDR33Q9C0J8 1336 aaKnown RBP17.02■□□□□ 0.32
RPF1-201ENST00000370654 WBP1LQ9NX94 342 aa17.02■□□□□ 0.32
RPF1-201ENST00000370654 RTL9Q8NET4 1388 aa17.02■□□□□ 0.31
RPF1-201ENST00000370654 C6orf229H3BNL8 230 aa17.02■□□□□ 0.31
RPF1-201ENST00000370654 PSMD14O00487 310 aa17.02■□□□□ 0.31
RPF1-201ENST00000370654 EGFRP00533 1210 aa17.02■□□□□ 0.31
RPF1-201ENST00000370654 CALD1Q05682 793 aaKnown RBP17.02■□□□□ 0.31
RPF1-201ENST00000370654 WASHC4Q2M389 1173 aa17.02■□□□□ 0.31
RPF1-201ENST00000370654 TBC1D16Q8TBP0 767 aa17.02■□□□□ 0.31
RPF1-201ENST00000370654 METTL22Q9BUU2 404 aaPredicted RBP17.02■□□□□ 0.31
RPF1-201ENST00000370654 BCL2L13Q9BXK5 485 aa17.02■□□□□ 0.31
RPF1-201ENST00000370654 PGAP2Q9UHJ9 254 aa17.02■□□□□ 0.31
RPF1-201ENST00000370654 CNOT7Q9UIV1 285 aaKnown RBP17.02■□□□□ 0.31
RPF1-201ENST00000370654 WTIPA6NIX2 430 aaPredicted RBP17.01■□□□□ 0.31
RPF1-201ENST00000370654 PCCAP05165 728 aaPredicted RBP17.01■□□□□ 0.31
RPF1-201ENST00000370654 IGKV5-2P06315 115 aa17.01■□□□□ 0.31
RPF1-201ENST00000370654 TNIP1Q15025 636 aa17.01■□□□□ 0.31
RPF1-201ENST00000370654 CYP4F22Q6NT55 531 aa17.01■□□□□ 0.31
RPF1-201ENST00000370654 G2E3Q7L622 706 aa17.01■□□□□ 0.31
RPF1-201ENST00000370654 MAP3K2Q9Y2U5 619 aa17.01■□□□□ 0.31
RPF1-201ENST00000370654 TRPM7Q96QT4 1865 aa17■□□□□ 0.31
RPF1-201ENST00000370654 CCDC30Q5VVM6 783 aa17■□□□□ 0.31
RPF1-201ENST00000370654 SAMD7Q7Z3H4 446 aa17■□□□□ 0.31
RPF1-201ENST00000370654 WWC1Q8IX03 1113 aa17■□□□□ 0.31
RPF1-201ENST00000370654 MICALL2Q8IY33 904 aa17■□□□□ 0.31
RPF1-201ENST00000370654 CCDC191Q8NCU4 936 aa17■□□□□ 0.31
RPF1-201ENST00000370654 SCN9AQ15858 1988 aa16.99■□□□□ 0.31
RPF1-201ENST00000370654 ECE2O60344 883 aa16.99■□□□□ 0.31
RPF1-201ENST00000370654 GRM1Q13255 1194 aa16.99■□□□□ 0.31
RPF1-201ENST00000370654 CAPNS2Q96L46 248 aa16.99■□□□□ 0.31
RPF1-201ENST00000370654 CWC25Q9NXE8 425 aaPredicted RBP16.99■□□□□ 0.31
RPF1-201ENST00000370654 TLL2Q9Y6L7 1015 aa16.99■□□□□ 0.31
RPF1-201ENST00000370654 PI4KAP2A4QPH2 592 aa16.98■□□□□ 0.31
RPF1-201ENST00000370654 PDE8AO60658 829 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms