RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 MAP6Q96JE9 813 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 HDAC8Q9BY41 377 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 SLC19A3Q9BZV2 496 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 ATG5Q9H1Y0 275 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 SYT4Q9H2B2 425 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 BEX1Q9HBH7 125 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 HAO2Q9NYQ3 351 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 ACTR10Q9NZ32 417 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 NDRG3Q9UGV2 375 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 SLC6A14Q9UN76 642 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 AK6Q9Y3D8 172 aaKnown RBP3.28□□□□□ -1.88
VMP1-216ENST00000592790 OR1A2Q9Y585 309 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 TBC1D3DA0A087WVF3 549 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 TBC1D3IA0A087WXS9 549 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 A0A1B0GTQ1 180 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 GLOD5A6NK44 160 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 EFCAB7A8K855 629 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 C1orf196B1AJZ1 125 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 TBC1D3LB9A6J9 549 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 FAM227AF5H4B4 570 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 MAN2B1O00754 1011 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 NDUFA2O43678 99 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 NUDT21O43809 227 aaKnown RBP3.28□□□□□ -1.88
VMP1-216ENST00000592790 LCMT2O60294 686 aaKnown RBP3.28□□□□□ -1.88
VMP1-216ENST00000592790 RPP14O95059 124 aaKnown RBP3.28□□□□□ -1.88
VMP1-216ENST00000592790 ETHE1O95571 254 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 AIFM1O95831 613 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 INHAP05111 366 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 TBC1D3HP0C7X1 549 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 GIMD1P0DJR0 217 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 SULT1A3P0DMM9 295 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 SULT1A4P0DMN0 295 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 CPMP14384 443 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 NID1P14543 1247 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 ZNF20P17024 532 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 SRMP19623 302 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 CD22P20273 847 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 VAMP1P23763 118 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 TEAD1P28347 426 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 IL12BP29460 328 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 HOXA6P31267 233 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 CTSOP43234 321 aaPredicted RBP3.28□□□□□ -1.88
VMP1-216ENST00000592790 CBX5P45973 191 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 BLKP51451 505 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 BTN1A1Q13410 526 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 TP53I3Q53FA7 332 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 EMC4Q5J8M3 183 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 HES5Q5TA89 166 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 AADACL4Q5VUY2 407 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 TBC1D3CQ6IPX1 549 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 ZNF770Q6IQ21 691 aaPredicted RBP3.28□□□□□ -1.88
VMP1-216ENST00000592790 ABHD17CQ6PCB6 329 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 GLDNQ6ZMI3 551 aaPredicted RBP3.28□□□□□ -1.88
VMP1-216ENST00000592790 TMED4Q7Z7H5 227 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 ZNF546Q86UE3 836 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 TMEM25Q86YD3 366 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 CDH26Q8IXH8 852 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 TBC1D3Q8IZP1 549 aaPredicted RBP3.28□□□□□ -1.88
VMP1-216ENST00000592790 OR9A2Q8NGT5 310 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 OR10G6Q8NH81 332 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 STK35Q8TDR2 534 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 ST8SIA4Q92187 359 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 MYEOVQ96EZ4 313 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 AHCYL2Q96HN2 611 aaKnown RBP3.28□□□□□ -1.88
VMP1-216ENST00000592790 PBDC1Q9BVG4 233 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 LYRM4Q9HD34 91 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 HINT3Q9NQE9 182 aaKnown RBP3.28□□□□□ -1.88
VMP1-216ENST00000592790 NANSQ9NR45 359 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 SLC22A11Q9NSA0 550 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 STEAP1Q9UHE8 339 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 SLC23A1Q9UHI7 598 aa3.28□□□□□ -1.88
VMP1-216ENST00000592790 C14orf166Q9Y224 244 aaKnown RBP3.28□□□□□ -1.88
VMP1-216ENST00000592790 A0A087WV62 115 aa3.28□□□□□ -1.89
VMP1-216ENST00000592790 A0A0U1RQS6 177 aa3.28□□□□□ -1.89
VMP1-216ENST00000592790 LRIT2A6NDA9 550 aa3.28□□□□□ -1.89
VMP1-216ENST00000592790 C19orf67A6NJJ6 358 aa3.28□□□□□ -1.89
VMP1-216ENST00000592790 ZNF736B4DX44 427 aaPredicted RBP3.28□□□□□ -1.89
VMP1-216ENST00000592790 TMEM150CB9EJG8 249 aa3.28□□□□□ -1.89
VMP1-216ENST00000592790 AKR7A2O43488 359 aa3.28□□□□□ -1.89
VMP1-216ENST00000592790 TLX3O43711 291 aaPredicted RBP3.28□□□□□ -1.89
VMP1-216ENST00000592790 FKTNO75072 461 aa3.28□□□□□ -1.89
VMP1-216ENST00000592790 B3GALNT1O75752 331 aa3.28□□□□□ -1.89
VMP1-216ENST00000592790 FGF18O76093 207 aa3.28□□□□□ -1.89
VMP1-216ENST00000592790 APOC1P02654 83 aa3.28□□□□□ -1.89
VMP1-216ENST00000592790 AMY2AP04746 511 aa3.28□□□□□ -1.89
VMP1-216ENST00000592790 EIF4EP06730 217 aaKnown RBP3.28□□□□□ -1.89
VMP1-216ENST00000592790 EPXP11678 715 aa3.28□□□□□ -1.89
VMP1-216ENST00000592790 RNH1P13489 461 aaKnown RBP3.28□□□□□ -1.89
VMP1-216ENST00000592790 F3P13726 295 aa3.28□□□□□ -1.89
VMP1-216ENST00000592790 TBPP20226 339 aa3.28□□□□□ -1.89
VMP1-216ENST00000592790 IGFBP6P24592 240 aaPredicted RBP3.28□□□□□ -1.89
VMP1-216ENST00000592790 SSTR2P30874 369 aa3.28□□□□□ -1.89
VMP1-216ENST00000592790 AKT2P31751 481 aa3.28□□□□□ -1.89
VMP1-216ENST00000592790 DLSTP36957 453 aa3.28□□□□□ -1.89
VMP1-216ENST00000592790 NAA10P41227 235 aaPredicted RBP3.28□□□□□ -1.89
VMP1-216ENST00000592790 PTH2RP49190 550 aa3.28□□□□□ -1.89
VMP1-216ENST00000592790 VEGFCP49767 419 aa3.28□□□□□ -1.89
VMP1-216ENST00000592790 YBX1P67809 324 aaKnown RBP3.28□□□□□ -1.89
VMP1-216ENST00000592790 CDK3Q00526 305 aa3.28□□□□□ -1.89
VMP1-216ENST00000592790 IHHQ14623 411 aa3.28□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms