RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, human

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBD1-208	ENST00000588009	PGAM2	P15259	253 aa		4.22	□□□□□ -1.73
TUBD1-208	ENST00000588009	CD1C	P29017	333 aa		4.22	□□□□□ -1.73
TUBD1-208	ENST00000588009	RGS19	P49795	217 aa		4.22	□□□□□ -1.73
TUBD1-208	ENST00000588009	SLC8A3	P57103	927 aa		4.22	□□□□□ -1.73
TUBD1-208	ENST00000588009	TGM3	Q08188	693 aa		4.22	□□□□□ -1.73
TUBD1-208	ENST00000588009	SERTAD2	Q14140	314 aa		4.22	□□□□□ -1.73
TUBD1-208	ENST00000588009	GFI1B	Q5VTD9	330 aa		4.22	□□□□□ -1.73
TUBD1-208	ENST00000588009	ENPP6	Q6UWR7	440 aa		4.22	□□□□□ -1.73
TUBD1-208	ENST00000588009		Q6ZTC4	211 aa		4.22	□□□□□ -1.73
TUBD1-208	ENST00000588009	KRTAP7-1	Q8IUC3	87 aa		4.22	□□□□□ -1.73
TUBD1-208	ENST00000588009	NAXD	Q8IW45	347 aa		4.22	□□□□□ -1.73
TUBD1-208	ENST00000588009	SDR9C7	Q8NEX9	313 aa		4.22	□□□□□ -1.73
TUBD1-208	ENST00000588009	OR52H1	Q8NGJ2	320 aa		4.22	□□□□□ -1.73
TUBD1-208	ENST00000588009	OR2A12	Q8NGT7	310 aa		4.22	□□□□□ -1.73
TUBD1-208	ENST00000588009	HTR3C	Q8WXA8	447 aa		4.22	□□□□□ -1.73
TUBD1-208	ENST00000588009	CXorf40B	Q96DE9	158 aa		4.22	□□□□□ -1.73
TUBD1-208	ENST00000588009	C12orf42	Q96LP6	360 aa		4.22	□□□□□ -1.73
TUBD1-208	ENST00000588009	OR5M11	Q96RB7	305 aa		4.22	□□□□□ -1.73
TUBD1-208	ENST00000588009	RANBP9	Q96S59	729 aa		4.22	□□□□□ -1.73
TUBD1-208	ENST00000588009	CCT8L2	Q96SF2	557 aa		4.22	□□□□□ -1.73
TUBD1-208	ENST00000588009	TBX15	Q96SF7	602 aa		4.22	□□□□□ -1.73
TUBD1-208	ENST00000588009	NMRAL1	Q9HBL8	299 aa		4.22	□□□□□ -1.73
TUBD1-208	ENST00000588009	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	4.22	□□□□□ -1.73
TUBD1-208	ENST00000588009	DDX18	Q9NVP1	670 aa	Known RBP	4.22	□□□□□ -1.73
TUBD1-208	ENST00000588009	BFAR	Q9NZS9	450 aa		4.22	□□□□□ -1.73
TUBD1-208	ENST00000588009	IKZF2	Q9UKS7	526 aa		4.22	□□□□□ -1.73
TUBD1-208	ENST00000588009	DENND4B	O75064	1496 aa	Predicted RBP	4.22	□□□□□ -1.73
TUBD1-208	ENST00000588009	NEURL4	Q96JN8	1562 aa		4.22	□□□□□ -1.73
TUBD1-208	ENST00000588009	ADGB	Q8N7X0	1667 aa		4.22	□□□□□ -1.73
TUBD1-208	ENST00000588009	TTC21B	Q7Z4L5	1316 aa		4.21	□□□□□ -1.73
TUBD1-208	ENST00000588009	CACNA1G	O43497	2377 aa		4.21	□□□□□ -1.73
TUBD1-208	ENST00000588009	COL16A1	Q07092	1604 aa	Predicted RBP	4.21	□□□□□ -1.73
TUBD1-208	ENST00000588009	XIRP1	Q702N8	1843 aa	Known RBP	4.21	□□□□□ -1.74
TUBD1-208	ENST00000588009	PHF1	O43189	567 aa	Predicted RBP	4.21	□□□□□ -1.74
TUBD1-208	ENST00000588009	DUSP14	O95147	198 aa	Known RBP	4.21	□□□□□ -1.74
TUBD1-208	ENST00000588009	GAPDH	P04406	335 aa	Known RBP	4.21	□□□□□ -1.74
TUBD1-208	ENST00000588009	ASGR1	P07306	291 aa		4.21	□□□□□ -1.74
TUBD1-208	ENST00000588009	MCF2	P10911	925 aa		4.21	□□□□□ -1.74
TUBD1-208	ENST00000588009	HOXD10	P28358	340 aa		4.21	□□□□□ -1.74
TUBD1-208	ENST00000588009	OPRD1	P41143	372 aa		4.21	□□□□□ -1.74
TUBD1-208	ENST00000588009	PTGDS	P41222	190 aa		4.21	□□□□□ -1.74
TUBD1-208	ENST00000588009	CRYBB2	P43320	205 aa		4.21	□□□□□ -1.74
TUBD1-208	ENST00000588009	PLP1	P60201	277 aa		4.21	□□□□□ -1.74
TUBD1-208	ENST00000588009	ASAH1	Q13510	395 aa		4.21	□□□□□ -1.74
TUBD1-208	ENST00000588009	GRB7	Q14451	532 aa		4.21	□□□□□ -1.74
TUBD1-208	ENST00000588009	PPP1R7	Q15435	360 aa		4.21	□□□□□ -1.74
TUBD1-208	ENST00000588009	MRGPRG-AS1	Q2M3A8	158 aa		4.21	□□□□□ -1.74
TUBD1-208	ENST00000588009	SLC22A10	Q63ZE4	541 aa		4.21	□□□□□ -1.74
TUBD1-208	ENST00000588009	LRRC66	Q68CR7	880 aa		4.21	□□□□□ -1.74
TUBD1-208	ENST00000588009	OR5M10	Q6IEU7	315 aa		4.21	□□□□□ -1.74
TUBD1-208	ENST00000588009	TMEM107	Q6UX40	140 aa		4.21	□□□□□ -1.74
TUBD1-208	ENST00000588009	NUS1	Q96E22	293 aa		4.21	□□□□□ -1.74
TUBD1-208	ENST00000588009	SERAC1	Q96JX3	654 aa		4.21	□□□□□ -1.74
TUBD1-208	ENST00000588009	RNF2	Q99496	336 aa		4.21	□□□□□ -1.74
TUBD1-208	ENST00000588009	REEP4	Q9H6H4	257 aa		4.21	□□□□□ -1.74
TUBD1-208	ENST00000588009	NARFL	Q9H6Q4	476 aa		4.21	□□□□□ -1.74
TUBD1-208	ENST00000588009	NEK6	Q9HC98	313 aa		4.21	□□□□□ -1.74
TUBD1-208	ENST00000588009	NT5M	Q9NPB1	228 aa		4.21	□□□□□ -1.74
TUBD1-208	ENST00000588009	GLRX2	Q9NS18	164 aa		4.21	□□□□□ -1.74
TUBD1-208	ENST00000588009	COPS3	Q9UNS2	423 aa		4.21	□□□□□ -1.74
TUBD1-208	ENST00000588009	CSDC2	Q9Y534	153 aa	Known RBP	4.21	□□□□□ -1.74
TUBD1-208	ENST00000588009	PEX16	Q9Y5Y5	336 aa		4.21	□□□□□ -1.74
TUBD1-208	ENST00000588009	NEO1	Q92859	1461 aa		4.21	□□□□□ -1.74
TUBD1-208	ENST00000588009	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	4.21	□□□□□ -1.74
TUBD1-208	ENST00000588009	ZNF142	P52746	1687 aa	Predicted RBP	4.21	□□□□□ -1.74
TUBD1-208	ENST00000588009	POLR1A	O95602	1720 aa	Predicted RBP	4.21	□□□□□ -1.74
TUBD1-208	ENST00000588009	RICTOR	Q6R327	1708 aa		4.21	□□□□□ -1.74
TUBD1-208	ENST00000588009	FGD6	Q6ZV73	1430 aa		4.21	□□□□□ -1.74
TUBD1-208	ENST00000588009	WDR19	Q8NEZ3	1342 aa		4.21	□□□□□ -1.74
TUBD1-208	ENST00000588009	IQANK1	A0A1B0GTG1	560 aa		4.2	□□□□□ -1.74
TUBD1-208	ENST00000588009	SERTM2	A0A1B0GWG4	89 aa		4.2	□□□□□ -1.74
TUBD1-208	ENST00000588009	TCRBV9S1A1T	A0A576	114 aa		4.2	□□□□□ -1.74
TUBD1-208	ENST00000588009	LRRIQ4	A6NIV6	560 aa		4.2	□□□□□ -1.74
TUBD1-208	ENST00000588009		A8MXQ7	604 aa		4.2	□□□□□ -1.74
TUBD1-208	ENST00000588009	GPAA1	O43292	621 aa		4.2	□□□□□ -1.74
TUBD1-208	ENST00000588009	ZNF254	O75437	659 aa		4.2	□□□□□ -1.74
TUBD1-208	ENST00000588009	ANXA13	P27216	316 aa		4.2	□□□□□ -1.74
TUBD1-208	ENST00000588009	GCK	P35557	465 aa		4.2	□□□□□ -1.74
TUBD1-208	ENST00000588009	KIR2DS2	P43631	304 aa		4.2	□□□□□ -1.74
TUBD1-208	ENST00000588009	ZFP36L1	Q07352	338 aa	Known RBP	4.2	□□□□□ -1.74
TUBD1-208	ENST00000588009	SLC10A7	Q0GE19	358 aa		4.2	□□□□□ -1.74
TUBD1-208	ENST00000588009	TGIF1	Q15583	401 aa		4.2	□□□□□ -1.74
TUBD1-208	ENST00000588009	ZNF77	Q15935	545 aa		4.2	□□□□□ -1.74
TUBD1-208	ENST00000588009	DUSP7	Q16829	419 aa		4.2	□□□□□ -1.74
TUBD1-208	ENST00000588009	ISX	Q2M1V0	245 aa		4.2	□□□□□ -1.74
TUBD1-208	ENST00000588009	QRICH1	Q2TAL8	776 aa		4.2	□□□□□ -1.74
TUBD1-208	ENST00000588009	XKR7	Q5GH72	579 aa		4.2	□□□□□ -1.74
TUBD1-208	ENST00000588009	HPS6	Q86YV9	775 aa		4.2	□□□□□ -1.74
TUBD1-208	ENST00000588009	GPR137C	Q8N3F9	429 aa		4.2	□□□□□ -1.74
TUBD1-208	ENST00000588009	CEP112	Q8N8E3	955 aa		4.2	□□□□□ -1.74
TUBD1-208	ENST00000588009	OR56B4	Q8NH76	319 aa		4.2	□□□□□ -1.74
TUBD1-208	ENST00000588009	AGR3	Q8TD06	166 aa		4.2	□□□□□ -1.74
TUBD1-208	ENST00000588009	RAPGEF5	Q92565	580 aa		4.2	□□□□□ -1.74
TUBD1-208	ENST00000588009	NR4A3	Q92570	626 aa		4.2	□□□□□ -1.74
TUBD1-208	ENST00000588009	IFT74	Q96LB3	600 aa		4.2	□□□□□ -1.74
TUBD1-208	ENST00000588009	NOL4L	Q96MY1	436 aa	Predicted RBP	4.2	□□□□□ -1.74
TUBD1-208	ENST00000588009	CHP1	Q99653	195 aa		4.2	□□□□□ -1.74
TUBD1-208	ENST00000588009	APOL2	Q9BQE5	337 aa		4.2	□□□□□ -1.74
TUBD1-208	ENST00000588009	CENPK	Q9BS16	269 aa		4.2	□□□□□ -1.74
TUBD1-208	ENST00000588009	PPA2	Q9H2U2	334 aa		4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms