RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 ADIGQ0VDE8 80 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 BNIP1Q12981 228 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 STK38Q15208 465 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 GOLGA7BQ2TAP0 167 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 CNPY1Q3B7I2 92 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 POM121L1PQ3SYA9 428 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 TMEM52BQ4KMG9 183 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 AGKQ53H12 422 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 CARD16Q5EG05 197 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 SEL1L3Q68CR1 1132 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 REP15Q6BDI9 236 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 RHBDD2Q6NTF9 364 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 PMF1Q6P1K2 205 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 RFWD3Q6PCD5 774 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 FAM159AQ6UWV7 190 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 ABRAXAS1Q6UWZ7 409 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 SCARA5Q6ZMJ2 495 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 DPY19L2P2Q6ZN68 376 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 ZNF497Q6ZNH5 498 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 TIPARPQ7Z3E1 657 aaKnown RBP3.03□□□□□ -1.92
HERC1-215ENST00000561436 GOLGA7Q7Z5G4 137 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 LUZP1Q86V48 1076 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 C17orf82Q86X59 251 aaPredicted RBP3.03□□□□□ -1.92
HERC1-215ENST00000561436 LRRC49Q8IUZ0 686 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 LMNTD2Q8IXW0 634 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 ZNF440Q8IYI8 595 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 SLC22A18ASQ8N1D0 253 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 RNF148Q8N7C7 305 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 FAM71CQ8NEG0 241 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 ZNF397Q8NF99 534 aaPredicted RBP3.03□□□□□ -1.92
HERC1-215ENST00000561436 OR4D9Q8NGE8 314 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 WFDC5Q8TCV5 224 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 LMX1AQ8TE12 382 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 DQX1Q8TE96 717 aaKnown RBP3.03□□□□□ -1.92
HERC1-215ENST00000561436 SSC4DQ8WTU2 575 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 ZNF641Q96N77 438 aaPredicted RBP3.03□□□□□ -1.92
HERC1-215ENST00000561436 ZNF599Q96NL3 588 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 RPRD1AQ96P16 312 aaPredicted RBP3.03□□□□□ -1.92
HERC1-215ENST00000561436 CABLES2Q9BTV7 478 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 CXXC4Q9H2H0 198 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 LIME1Q9H400 295 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 HEXA-AS1Q9H8Q6 139 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 Q9HAA7 133 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 NGBQ9NPG2 151 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 FBXO8Q9NRD0 319 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.03□□□□□ -1.92
HERC1-215ENST00000561436 ZNF175Q9Y473 711 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 MFHAS1Q9Y4C4 1052 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 FKBP7Q9Y680 259 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 DOCK8Q8NF50 2099 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 C2orf16Q68DN1 1984 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 PCDH15Q96QU1 1955 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 IGHV3OR16-10A0A075B7F0 116 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 GOLGA6L7A0A1B0GV03 622 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 E9PQ18 207 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 LGALS8O00214 317 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 KPNA3O00505 521 aaPredicted RBP3.02□□□□□ -1.93
HERC1-215ENST00000561436 POLR2DO15514 142 aaKnown RBP3.02□□□□□ -1.93
HERC1-215ENST00000561436 KLRC4O43908 158 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 TM7SF2O76062 418 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 GNA14O95837 355 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 IGHG1P01857 330 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 CTSLP07711 333 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 RHOCP08134 193 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 SYT1P21579 422 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 CMA1P23946 247 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 TRIM23P36406 574 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 CSNK1DP48730 415 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 CAMLGP49069 296 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 BPIFB3P59826 476 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 KRTAP10-5P60370 271 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 KRTAP10-12P60413 245 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 TRA2BP62995 288 aaKnown RBP3.02□□□□□ -1.93
HERC1-215ENST00000561436 HERVK_113P63132 956 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 ERVK-8P63133 956 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 CCL7P80098 99 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 LRRC63Q05C16 580 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 PAX8Q06710 450 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 DEFB133Q30KQ1 61 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 C14orf28Q4W4Y0 310 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 ZCWPW2Q504Y3 356 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 UNC50Q53HI1 259 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 TCHHL1Q5QJ38 904 aaPredicted RBP3.02□□□□□ -1.93
HERC1-215ENST00000561436 RESP18Q5W5W9 173 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 SPOPLQ6IQ16 392 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 C22orf39Q6P5X5 142 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 WDR74Q6RFH5 385 aaPredicted RBP3.02□□□□□ -1.93
HERC1-215ENST00000561436 P4HA3Q7Z4N8 544 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 TAC4Q86UU9 113 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 PHC2Q8IXK0 858 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 CENPSQ8N2Z9 138 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 CHDHQ8NE62 594 aaPredicted RBP3.02□□□□□ -1.93
HERC1-215ENST00000561436 CXorf40AQ8TE69 158 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 NT5C3BQ969T7 300 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 NABP1Q96AH0 204 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 TBC1D31Q96DN5 1066 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 PAGE5Q96GU1 130 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 TSG101Q99816 390 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 NDUFAF3Q9BU61 184 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 WRAP53Q9BUR4 548 aaKnown RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms