RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 TPST1O60507 370 aa12.11□□□□□ -0.47
SMAD3-214ENST00000560402 C6orf47O95873 294 aa12.11□□□□□ -0.47
SMAD3-214ENST00000560402 THBDP07204 575 aa12.11□□□□□ -0.47
SMAD3-214ENST00000560402 ADH6P28332 368 aa12.11□□□□□ -0.47
SMAD3-214ENST00000560402 AGTR1P30556 359 aa12.11□□□□□ -0.47
SMAD3-214ENST00000560402 PTH2RP49190 550 aa12.11□□□□□ -0.47
SMAD3-214ENST00000560402 ZNF239Q16600 458 aaKnown RBP12.11□□□□□ -0.47
SMAD3-214ENST00000560402 SPDYE7PQ495Y7 208 aa12.11□□□□□ -0.47
SMAD3-214ENST00000560402 GCNT6Q5T4J0 391 aa12.11□□□□□ -0.47
SMAD3-214ENST00000560402 HBMQ6B0K9 141 aa12.11□□□□□ -0.47
SMAD3-214ENST00000560402 FIGNL1Q6PIW4 674 aa12.11□□□□□ -0.47
SMAD3-214ENST00000560402 ZNF704Q6ZNC4 412 aaPredicted RBP12.11□□□□□ -0.47
SMAD3-214ENST00000560402 AMIGO2Q86SJ2 522 aa12.11□□□□□ -0.47
SMAD3-214ENST00000560402 GATSQ8NAP1 163 aa12.11□□□□□ -0.47
SMAD3-214ENST00000560402 B4GALNT2Q8NHY0 566 aa12.11□□□□□ -0.47
SMAD3-214ENST00000560402 RNF128Q8TEB7 428 aa12.11□□□□□ -0.47
SMAD3-214ENST00000560402 ZFP90Q8TF47 636 aa12.11□□□□□ -0.47
SMAD3-214ENST00000560402 TMEM171Q8WVE6 324 aa12.11□□□□□ -0.47
SMAD3-214ENST00000560402 IGFBPL1Q8WX77 278 aa12.11□□□□□ -0.47
SMAD3-214ENST00000560402 CPNE4Q96A23 557 aaPredicted RBP12.11□□□□□ -0.47
SMAD3-214ENST00000560402 AURKBQ96GD4 344 aaPredicted RBP12.11□□□□□ -0.47
SMAD3-214ENST00000560402 CHID1Q9BWS9 393 aa12.11□□□□□ -0.47
SMAD3-214ENST00000560402 BTBD2Q9BX70 525 aa12.11□□□□□ -0.47
SMAD3-214ENST00000560402 SEMA6AQ9H2E6 1030 aa12.11□□□□□ -0.47
SMAD3-214ENST00000560402 CXorf56Q9H5V9 222 aa12.11□□□□□ -0.47
SMAD3-214ENST00000560402 GP6Q9HCN6 339 aa12.11□□□□□ -0.47
SMAD3-214ENST00000560402 TIGARQ9NQ88 270 aa12.11□□□□□ -0.47
SMAD3-214ENST00000560402 ZCCHC3Q9NUD5 404 aaKnown RBP12.11□□□□□ -0.47
SMAD3-214ENST00000560402 DCAF13Q9NV06 445 aaKnown RBP12.11□□□□□ -0.47
SMAD3-214ENST00000560402 ADPRHL2Q9NX46 363 aa12.11□□□□□ -0.47
SMAD3-214ENST00000560402 THUMPD1Q9NXG2 353 aaKnown RBP12.11□□□□□ -0.47
SMAD3-214ENST00000560402 CLEC4AQ9UMR7 237 aa12.11□□□□□ -0.47
SMAD3-214ENST00000560402 FAF1Q9UNN5 650 aaPredicted RBP12.11□□□□□ -0.47
SMAD3-214ENST00000560402 GJE1A6NN92 205 aa12.1□□□□□ -0.47
SMAD3-214ENST00000560402 CLOCKO15516 846 aa12.1□□□□□ -0.47
SMAD3-214ENST00000560402 KLF4O43474 513 aa12.1□□□□□ -0.47
SMAD3-214ENST00000560402 LY6G6DO95868 133 aa12.1□□□□□ -0.47
SMAD3-214ENST00000560402 SERPINA1P01009 418 aa12.1□□□□□ -0.47
SMAD3-214ENST00000560402 PCGF2P35227 344 aa12.1□□□□□ -0.47
SMAD3-214ENST00000560402 CRATP43155 626 aa12.1□□□□□ -0.47
SMAD3-214ENST00000560402 RNPS1Q15287 305 aaKnown RBP12.1□□□□□ -0.47
SMAD3-214ENST00000560402 ANKRD34AQ69YU3 496 aa12.1□□□□□ -0.47
SMAD3-214ENST00000560402 CDC73Q6P1J9 531 aa12.1□□□□□ -0.47
SMAD3-214ENST00000560402 BHLHB9Q6PI77 547 aa12.1□□□□□ -0.47
SMAD3-214ENST00000560402 Q71RC1 249 aaPredicted RBP12.1□□□□□ -0.47
SMAD3-214ENST00000560402 ZAR1Q86SH2 424 aa12.1□□□□□ -0.47
SMAD3-214ENST00000560402 SVOPLQ8N434 492 aa12.1□□□□□ -0.47
SMAD3-214ENST00000560402 GALNT4Q8N4A0 578 aa12.1□□□□□ -0.47
SMAD3-214ENST00000560402 ZNF611Q8N823 705 aa12.1□□□□□ -0.47
SMAD3-214ENST00000560402 STEAP2Q8NFT2 490 aa12.1□□□□□ -0.47
SMAD3-214ENST00000560402 OR56A1Q8NGH5 318 aa12.1□□□□□ -0.47
SMAD3-214ENST00000560402 LZICQ8WZA0 190 aa12.1□□□□□ -0.47
SMAD3-214ENST00000560402 SH3YL1Q96HL8 342 aaPredicted RBP12.1□□□□□ -0.47
SMAD3-214ENST00000560402 CIB1Q99828 191 aa12.1□□□□□ -0.47
SMAD3-214ENST00000560402 USB1Q9BQ65 265 aaKnown RBP12.1□□□□□ -0.47
SMAD3-214ENST00000560402 TMEM204Q9BSN7 226 aa12.1□□□□□ -0.47
SMAD3-214ENST00000560402 ACTR6Q9GZN1 396 aa12.1□□□□□ -0.47
SMAD3-214ENST00000560402 HOXD1Q9GZZ0 328 aa12.1□□□□□ -0.47
SMAD3-214ENST00000560402 PIGUQ9H490 435 aa12.1□□□□□ -0.47
SMAD3-214ENST00000560402 IKZF5Q9H5V7 419 aa12.1□□□□□ -0.47
SMAD3-214ENST00000560402 SIRT3Q9NTG7 399 aaPredicted RBP12.1□□□□□ -0.47
SMAD3-214ENST00000560402 DNAJB9Q9UBS3 223 aa12.1□□□□□ -0.47
SMAD3-214ENST00000560402 ANGPT4Q9Y264 503 aa12.1□□□□□ -0.47
SMAD3-214ENST00000560402 SNX8Q9Y5X2 465 aa12.1□□□□□ -0.47
SMAD3-214ENST00000560402 GPC6Q9Y625 555 aaPredicted RBP12.1□□□□□ -0.47
SMAD3-214ENST00000560402 V9GYQ6 96 aa12.1□□□□□ -0.47
SMAD3-214ENST00000560402 HIVEP2P31629 2446 aa12.1□□□□□ -0.47
SMAD3-214ENST00000560402 ROS1P08922 2347 aa12.1□□□□□ -0.47
SMAD3-214ENST00000560402 TLN2Q9Y4G6 2542 aa12.09□□□□□ -0.47
SMAD3-214ENST00000560402 A0A0J9YW62 118 aa12.09□□□□□ -0.47
SMAD3-214ENST00000560402 SAC3D1A6NKF1 404 aa12.09□□□□□ -0.47
SMAD3-214ENST00000560402 H3BNH8 94 aa12.09□□□□□ -0.47
SMAD3-214ENST00000560402 HS3ST1O14792 307 aa12.09□□□□□ -0.47
SMAD3-214ENST00000560402 DENRO43583 198 aaKnown RBP12.09□□□□□ -0.47
SMAD3-214ENST00000560402 ZNF682O95780 498 aa12.09□□□□□ -0.47
SMAD3-214ENST00000560402 LINGO3P0C6S8 592 aa12.09□□□□□ -0.47
SMAD3-214ENST00000560402 NID1P14543 1247 aa12.09□□□□□ -0.47
SMAD3-214ENST00000560402 ZNF23P17027 643 aa12.09□□□□□ -0.47
SMAD3-214ENST00000560402 GZMMP51124 257 aa12.09□□□□□ -0.47
SMAD3-214ENST00000560402 P2RX1P51575 399 aa12.09□□□□□ -0.47
SMAD3-214ENST00000560402 ARHGDIAP52565 204 aa12.09□□□□□ -0.47
SMAD3-214ENST00000560402 HBA1P69905 142 aa12.09□□□□□ -0.47
SMAD3-214ENST00000560402 TXNL4AP83876 142 aaKnown RBP12.09□□□□□ -0.47
SMAD3-214ENST00000560402 EPS8Q12929 822 aa12.09□□□□□ -0.47
SMAD3-214ENST00000560402 FOXF1Q12946 379 aa12.09□□□□□ -0.47
SMAD3-214ENST00000560402 LASP1Q14847 261 aaKnown RBP12.09□□□□□ -0.47
SMAD3-214ENST00000560402 RGNQ15493 299 aa12.09□□□□□ -0.47
SMAD3-214ENST00000560402 CD226Q15762 336 aa12.09□□□□□ -0.47
SMAD3-214ENST00000560402 LRRC23Q53EV4 343 aaPredicted RBP12.09□□□□□ -0.47
SMAD3-214ENST00000560402 TMEM201Q5SNT2 666 aa12.09□□□□□ -0.47
SMAD3-214ENST00000560402 C22orf34Q6ZV56 151 aa12.09□□□□□ -0.47
SMAD3-214ENST00000560402 WFDC8Q8IUA0 241 aa12.09□□□□□ -0.47
SMAD3-214ENST00000560402 PSMA8Q8TAA3 256 aa12.09□□□□□ -0.47
SMAD3-214ENST00000560402 POC1BQ8TC44 478 aa12.09□□□□□ -0.47
SMAD3-214ENST00000560402 SFXN5Q8TD22 340 aa12.09□□□□□ -0.47
SMAD3-214ENST00000560402 MOAP1Q96BY2 351 aa12.09□□□□□ -0.47
SMAD3-214ENST00000560402 PLPPR2Q96GM1 343 aa12.09□□□□□ -0.47
SMAD3-214ENST00000560402 PYURFQ96I23 114 aa12.09□□□□□ -0.47
SMAD3-214ENST00000560402 OSBPL10Q9BXB5 764 aa12.09□□□□□ -0.47
SMAD3-214ENST00000560402 HDHD5Q9BXW7 423 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms