RNA–Protein interactions for RNA: ENST00000542420.6

SS18-205, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2 BASIC

Gene SS18, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-205ENST00000542420 C5orf46Q6UWT4 87 aa9.04□□□□□ -0.96
SS18-205ENST00000542420 LYPD8Q6UX82 237 aa9.04□□□□□ -0.96
SS18-205ENST00000542420 ELMOD2Q8IZ81 293 aa9.04□□□□□ -0.96
SS18-205ENST00000542420 ZNF614Q8N883 585 aa9.04□□□□□ -0.96
SS18-205ENST00000542420 OR10H4Q8NGA5 316 aa9.04□□□□□ -0.96
SS18-205ENST00000542420 OR4N2Q8NGD1 307 aa9.04□□□□□ -0.96
SS18-205ENST00000542420 PTPMT1Q8WUK0 201 aaPredicted RBP9.04□□□□□ -0.96
SS18-205ENST00000542420 DAZLQ92904 295 aaKnown RBP9.04□□□□□ -0.96
SS18-205ENST00000542420 CLDN23Q96B33 292 aa9.04□□□□□ -0.96
SS18-205ENST00000542420 PTCHD1Q96NR3 888 aa9.04□□□□□ -0.96
SS18-205ENST00000542420 ERMAPQ96PL5 475 aaPredicted RBP9.04□□□□□ -0.96
SS18-205ENST00000542420 MRI1Q9BV20 369 aa9.04□□□□□ -0.96
SS18-205ENST00000542420 TMED9Q9BVK6 235 aa9.04□□□□□ -0.96
SS18-205ENST00000542420 ENKD1Q9H0I2 346 aa9.04□□□□□ -0.96
SS18-205ENST00000542420 PRO3102Q9H379 93 aa9.04□□□□□ -0.96
SS18-205ENST00000542420 TBC1D17Q9HA65 648 aa9.04□□□□□ -0.96
SS18-205ENST00000542420 DTX4Q9Y2E6 619 aa9.04□□□□□ -0.96
SS18-205ENST00000542420 EXPH5Q8NEV8 1989 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 TNRC6BQ9UPQ9 1833 aaKnown RBP9.03□□□□□ -0.96
SS18-205ENST00000542420 TCRBV16S1A1N1A0A5B0 115 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 B8ZZF3 427 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 TRIM77I1YAP6 450 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 ZNF264O43296 627 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 ADAM11O75078 769 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 ARL6IP5O75915 188 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 IFNA16P05015 189 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 CTSBP07858 339 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 CSF3P09919 207 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 IL9P15248 144 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 GLB1P16278 677 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 RBMS1P29558 406 aaKnown RBP9.03□□□□□ -0.96
SS18-205ENST00000542420 GRK6P43250 576 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 RFX3P48380 749 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 RPS7P62081 194 aaKnown RBP9.03□□□□□ -0.96
SS18-205ENST00000542420 MXD1Q05195 221 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 PON3Q15166 354 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 KLHL12Q53G59 568 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 SLC6A19Q695T7 634 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 GPR139Q6DWJ6 353 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 MZT2BQ6NZ67 158 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 ZNF517Q6ZMY9 492 aaPredicted RBP9.03□□□□□ -0.96
SS18-205ENST00000542420 GATAD2AQ86YP4 633 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 TMEM151BQ8IW70 566 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 SYT14Q8NB59 555 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 PLPP5Q8NEB5 264 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 OR5M3Q8NGP4 307 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 OR6F1Q8NGZ6 308 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 OR6S1Q8NH40 331 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 OR51A7Q8NH64 312 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 GIMAP1Q8WWP7 306 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 ADIPOR1Q96A54 375 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 SENP5Q96HI0 755 aaPredicted RBP9.03□□□□□ -0.96
SS18-205ENST00000542420 MAP6Q96JE9 813 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 TGM7Q96PF1 710 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 HCAR1Q9BXC0 346 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 RNF32Q9H0A6 362 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 DUSP15Q9H1R2 295 aaPredicted RBP9.03□□□□□ -0.96
SS18-205ENST00000542420 ABRACLQ9P1F3 81 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 LRIT1Q9P2V4 623 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 ST6GALNAC2Q9UJ37 374 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 IGHV1OR21-1A0A087WYE8 117 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 A0A1W2PPC1 479 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 A0A1W2PQ09 198 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 ELOA3DA6NLF2 546 aaPredicted RBP9.03□□□□□ -0.96
SS18-205ENST00000542420 CDC40O60508 579 aaKnown RBP eCLIP9.03□□□□□ -0.96
SS18-205ENST00000542420 OR2B3O76000 313 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 GLCEO94923 617 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 SPNP16150 400 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 MAOAP21397 527 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 MAT1AQ00266 395 aaKnown RBP9.03□□□□□ -0.96
SS18-205ENST00000542420 CDK10Q15131 360 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 BAK1Q16611 211 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 ELOA3BQ3SY89 546 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 SNAP47Q5SQN1 464 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 MAMSTRQ6ZN01 415 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 MISPQ8IVT2 679 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 CADM2Q8N3J6 435 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 NPEPL1Q8NDH3 523 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 DUSP18Q8NEJ0 188 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 ELOA3Q8NG57 546 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 THRSPQ92748 146 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 SMIM19Q96E16 107 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 PGLYRP3Q96LB9 341 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 KCNJ15Q99712 375 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 TRAF4Q9BUZ4 470 aaPredicted RBP9.03□□□□□ -0.96
SS18-205ENST00000542420 HDHD5Q9BXW7 423 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 TPSD1Q9BZJ3 242 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 ADAM19Q9H013 955 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 SPRTNQ9H040 489 aaPredicted RBP9.03□□□□□ -0.96
SS18-205ENST00000542420 TTYH1Q9H313 450 aaPredicted RBP9.03□□□□□ -0.96
SS18-205ENST00000542420 ISG20L2Q9H9L3 353 aaKnown RBP9.03□□□□□ -0.96
SS18-205ENST00000542420 FKRPQ9H9S5 495 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 ZMIZ1Q9ULJ6 1067 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 SRPK3Q9UPE1 567 aa9.03□□□□□ -0.96
SS18-205ENST00000542420 PCDH15Q96QU1 1955 aa9.02□□□□□ -0.96
SS18-205ENST00000542420 MKI67P46013 3256 aaKnown RBP9.02□□□□□ -0.97
SS18-205ENST00000542420 A0A0G2JMP0 313 aa9.02□□□□□ -0.97
SS18-205ENST00000542420 HRKO00198 91 aa9.02□□□□□ -0.97
SS18-205ENST00000542420 UTS2O95399 124 aa9.02□□□□□ -0.97
SS18-205ENST00000542420 CD14P08571 375 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms