RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 DHRS4L2Q6PKH6 230 aa12.62□□□□□ -0.39
UBE3B-206ENST00000536398 Q6ZT83 130 aa12.62□□□□□ -0.39
UBE3B-206ENST00000536398 ZNF100Q8IYN0 542 aa12.62□□□□□ -0.39
UBE3B-206ENST00000536398 SMYD1Q8NB12 490 aa12.62□□□□□ -0.39
UBE3B-206ENST00000536398 HIPK4Q8NE63 616 aa12.62□□□□□ -0.39
UBE3B-206ENST00000536398 PIGXQ8TBF5 258 aa12.62□□□□□ -0.39
UBE3B-206ENST00000536398 TSPEARQ8WU66 669 aa12.62□□□□□ -0.39
UBE3B-206ENST00000536398 KISS1RQ969F8 398 aaPredicted RBP12.62□□□□□ -0.39
UBE3B-206ENST00000536398 FOXC2Q99958 501 aa12.62□□□□□ -0.39
UBE3B-206ENST00000536398 HDHD5Q9BXW7 423 aa12.62□□□□□ -0.39
UBE3B-206ENST00000536398 ARMC7Q9H6L4 198 aa12.62□□□□□ -0.39
UBE3B-206ENST00000536398 KAT8Q9H7Z6 458 aaKnown RBP12.62□□□□□ -0.39
UBE3B-206ENST00000536398 FANCFQ9NPI8 374 aa12.62□□□□□ -0.39
UBE3B-206ENST00000536398 LOC100653049A0A140TA62 436 aa12.61□□□□□ -0.39
UBE3B-206ENST00000536398 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.61□□□□□ -0.39
UBE3B-206ENST00000536398 A0A1B0GWA3 101 aa12.61□□□□□ -0.39
UBE3B-206ENST00000536398 A8MVM7 634 aa12.61□□□□□ -0.39
UBE3B-206ENST00000536398 NPIPB7O75200 414 aa12.61□□□□□ -0.39
UBE3B-206ENST00000536398 KRT34O76011 436 aa12.61□□□□□ -0.39
UBE3B-206ENST00000536398 MFN2O95140 757 aa12.61□□□□□ -0.39
UBE3B-206ENST00000536398 RAF1P04049 648 aa12.61□□□□□ -0.39
UBE3B-206ENST00000536398 CD53P19397 219 aa12.61□□□□□ -0.39
UBE3B-206ENST00000536398 IL32P24001 234 aa12.61□□□□□ -0.39
UBE3B-206ENST00000536398 MDH1P40925 334 aaKnown RBP12.61□□□□□ -0.39
UBE3B-206ENST00000536398 MAP2K6P52564 334 aa12.61□□□□□ -0.39
UBE3B-206ENST00000536398 FOXG1P55316 489 aaPredicted RBP12.61□□□□□ -0.39
UBE3B-206ENST00000536398 ITGADQ13349 1161 aa12.61□□□□□ -0.39
UBE3B-206ENST00000536398 KEAP1Q14145 624 aa12.61□□□□□ -0.39
UBE3B-206ENST00000536398 SLC17A1Q14916 467 aa12.61□□□□□ -0.39
UBE3B-206ENST00000536398 TAB1Q15750 504 aa12.61□□□□□ -0.39
UBE3B-206ENST00000536398 CYP51A1Q16850 503 aa12.61□□□□□ -0.39
UBE3B-206ENST00000536398 OTUD3Q5T2D3 398 aaPredicted RBP12.61□□□□□ -0.39
UBE3B-206ENST00000536398 C1orf140Q5VVS0 124 aa12.61□□□□□ -0.39
UBE3B-206ENST00000536398 SPNS3Q6ZMD2 512 aa12.61□□□□□ -0.39
UBE3B-206ENST00000536398 BHLHA15Q7RTS1 189 aaPredicted RBP12.61□□□□□ -0.39
UBE3B-206ENST00000536398 KRT73Q86Y46 540 aa12.61□□□□□ -0.39
UBE3B-206ENST00000536398 P3H2Q8IVL5 708 aa12.61□□□□□ -0.39
UBE3B-206ENST00000536398 STEAP2Q8NFT2 490 aa12.61□□□□□ -0.39
UBE3B-206ENST00000536398 OR10A6Q8NH74 314 aa12.61□□□□□ -0.39
UBE3B-206ENST00000536398 PLPPR2Q96GM1 343 aa12.61□□□□□ -0.39
UBE3B-206ENST00000536398 ZNF317Q96PQ6 595 aaPredicted RBP12.61□□□□□ -0.39
UBE3B-206ENST00000536398 NAA11Q9BSU3 229 aaPredicted RBP12.61□□□□□ -0.39
UBE3B-206ENST00000536398 CXXC4Q9H2H0 198 aa12.61□□□□□ -0.39
UBE3B-206ENST00000536398 CCDC134Q9H6E4 229 aa12.61□□□□□ -0.39
UBE3B-206ENST00000536398 UBTD1Q9HAC8 227 aa12.61□□□□□ -0.39
UBE3B-206ENST00000536398 ADPRHL2Q9NX46 363 aa12.61□□□□□ -0.39
UBE3B-206ENST00000536398 EMC3Q9P0I2 261 aa12.61□□□□□ -0.39
UBE3B-206ENST00000536398 FLVCR1Q9Y5Y0 555 aa12.61□□□□□ -0.39
UBE3B-206ENST00000536398 HIVEP1P15822 2718 aa12.61□□□□□ -0.39
UBE3B-206ENST00000536398 M0QX08 132 aa12.6□□□□□ -0.39
UBE3B-206ENST00000536398 FXYD1O00168 92 aa12.6□□□□□ -0.39
UBE3B-206ENST00000536398 EIF1BO60739 113 aaKnown RBP12.6□□□□□ -0.39
UBE3B-206ENST00000536398 OPN1SWP03999 348 aa12.6□□□□□ -0.39
UBE3B-206ENST00000536398 GPIP06744 558 aa12.6□□□□□ -0.39
UBE3B-206ENST00000536398 P2RY4P51582 365 aa12.6□□□□□ -0.39
UBE3B-206ENST00000536398 PCBP3P57721 371 aaKnown RBP12.6□□□□□ -0.39
UBE3B-206ENST00000536398 P2RY6Q15077 328 aa12.6□□□□□ -0.39
UBE3B-206ENST00000536398 DUSP7Q16829 419 aa12.6□□□□□ -0.39
UBE3B-206ENST00000536398 RABL3Q5HYI8 236 aa12.6□□□□□ -0.39
UBE3B-206ENST00000536398 REP15Q6BDI9 236 aa12.6□□□□□ -0.39
UBE3B-206ENST00000536398 NANOGP8Q6NSW7 305 aa12.6□□□□□ -0.39
UBE3B-206ENST00000536398 PAQR6Q6TCH4 344 aa12.6□□□□□ -0.39
UBE3B-206ENST00000536398 SEZ6L2Q6UXD5 910 aa12.6□□□□□ -0.39
UBE3B-206ENST00000536398 NET1Q7Z628 596 aaPredicted RBP12.6□□□□□ -0.39
UBE3B-206ENST00000536398 SNX32Q86XE0 403 aa12.6□□□□□ -0.39
UBE3B-206ENST00000536398 ARMC8Q8IUR7 673 aa12.6□□□□□ -0.39
UBE3B-206ENST00000536398 UBE2J2Q8N2K1 259 aa12.6□□□□□ -0.39
UBE3B-206ENST00000536398 ZIC4Q8N9L1 334 aa12.6□□□□□ -0.39
UBE3B-206ENST00000536398 C11orf65Q8NCR3 313 aa12.6□□□□□ -0.39
UBE3B-206ENST00000536398 GPR32P1Q8NGA4 272 aa12.6□□□□□ -0.39
UBE3B-206ENST00000536398 OR9K2Q8NGE7 335 aa12.6□□□□□ -0.39
UBE3B-206ENST00000536398 OR52E4Q8NGH9 312 aa12.6□□□□□ -0.39
UBE3B-206ENST00000536398 SLC35B4Q969S0 331 aa12.6□□□□□ -0.39
UBE3B-206ENST00000536398 APH1AQ96BI3 265 aa12.6□□□□□ -0.39
UBE3B-206ENST00000536398 MBD6Q96DN6 1003 aa12.6□□□□□ -0.39
UBE3B-206ENST00000536398 KTI12Q96EK9 354 aaPredicted RBP12.6□□□□□ -0.39
UBE3B-206ENST00000536398 ZNF385AQ96PM9 386 aaKnown RBP12.6□□□□□ -0.39
UBE3B-206ENST00000536398 ZNF607Q96SK3 696 aa12.6□□□□□ -0.39
UBE3B-206ENST00000536398 PTDSS2Q9BVG9 487 aa12.6□□□□□ -0.39
UBE3B-206ENST00000536398 SPATA5L1Q9BVQ7 753 aa12.6□□□□□ -0.39
UBE3B-206ENST00000536398 OR10A4Q9H209 315 aa12.6□□□□□ -0.39
UBE3B-206ENST00000536398 NANOGQ9H9S0 305 aa12.6□□□□□ -0.39
UBE3B-206ENST00000536398 MED4Q9NPJ6 270 aa12.6□□□□□ -0.39
UBE3B-206ENST00000536398 ARMCX1Q9P291 453 aa12.6□□□□□ -0.39
UBE3B-206ENST00000536398 USP22Q9UPT9 525 aa12.6□□□□□ -0.39
UBE3B-206ENST00000536398 ANGPT4Q9Y264 503 aa12.6□□□□□ -0.39
UBE3B-206ENST00000536398 F8P00451 2351 aa12.6□□□□□ -0.39
UBE3B-206ENST00000536398 TEP1Q99973 2627 aaKnown RBP12.6□□□□□ -0.39
UBE3B-206ENST00000536398 IGKV1D-42A0A075B6H8 117 aa12.59□□□□□ -0.39
UBE3B-206ENST00000536398 AQP7P3A6NL99 342 aa12.59□□□□□ -0.39
UBE3B-206ENST00000536398 ELOA3DA6NLF2 546 aaPredicted RBP12.59□□□□□ -0.39
UBE3B-206ENST00000536398 FTCDNL1E5RQL4 147 aa12.59□□□□□ -0.39
UBE3B-206ENST00000536398 M0R3H8 397 aa12.59□□□□□ -0.39
UBE3B-206ENST00000536398 GPR171O14626 319 aa12.59□□□□□ -0.39
UBE3B-206ENST00000536398 MRPL33O75394 65 aaKnown RBP12.59□□□□□ -0.39
UBE3B-206ENST00000536398 SERPINB7O75635 380 aa12.59□□□□□ -0.39
UBE3B-206ENST00000536398 PTNP21246 168 aa12.59□□□□□ -0.39
UBE3B-206ENST00000536398 RPS5P46782 204 aaKnown RBP12.59□□□□□ -0.39
UBE3B-206ENST00000536398 STK11Q15831 433 aa12.59□□□□□ -0.39
UBE3B-206ENST00000536398 DEFB113Q30KQ7 82 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms