RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 MALT1Q9UDY8 824 aa21.41■■□□□ 1.02
HLA-C-209ENST00000495835 SLC9A8Q9Y2E8 581 aa21.41■■□□□ 1.02
HLA-C-209ENST00000495835 RNF115Q9Y4L5 304 aa21.41■■□□□ 1.02
HLA-C-209ENST00000495835 NIPBLQ6KC79 2804 aaeCLIP21.41■■□□□ 1.02
HLA-C-209ENST00000495835 A8MVM7 634 aa21.4■■□□□ 1.02
HLA-C-209ENST00000495835 C5orf58C9J3I9 102 aa21.4■■□□□ 1.02
HLA-C-209ENST00000495835 LYZL6O75951 148 aa21.4■■□□□ 1.02
HLA-C-209ENST00000495835 CD3EP07766 207 aa21.4■■□□□ 1.02
HLA-C-209ENST00000495835 H2AFXP16104 143 aaPredicted RBP21.4■■□□□ 1.02
HLA-C-209ENST00000495835 EDNRAP25101 427 aa21.4■■□□□ 1.02
HLA-C-209ENST00000495835 SQLEQ14534 574 aa21.4■■□□□ 1.02
HLA-C-209ENST00000495835 SLC17A1Q14916 467 aa21.4■■□□□ 1.02
HLA-C-209ENST00000495835 PPA1Q15181 289 aa21.4■■□□□ 1.02
HLA-C-209ENST00000495835 RPS26P11Q5JNZ5 115 aaPredicted RBP21.4■■□□□ 1.02
HLA-C-209ENST00000495835 BIVMQ86UB2 503 aa21.4■■□□□ 1.02
HLA-C-209ENST00000495835 C18orf12Q96KH6 178 aa21.4■■□□□ 1.02
HLA-C-209ENST00000495835 CXorf56Q9H5V9 222 aa21.4■■□□□ 1.02
HLA-C-209ENST00000495835 ASB6Q9NWX5 421 aa21.4■■□□□ 1.02
HLA-C-209ENST00000495835 CHST2Q9Y4C5 530 aa21.4■■□□□ 1.02
HLA-C-209ENST00000495835 A0A1W2PP18 115 aa21.39■■□□□ 1.01
HLA-C-209ENST00000495835 OR5H1A6NKK0 313 aa21.39■■□□□ 1.01
HLA-C-209ENST00000495835 PLAUP00749 431 aa21.39■■□□□ 1.01
HLA-C-209ENST00000495835 NCF2P19878 526 aaPredicted RBP21.39■■□□□ 1.01
HLA-C-209ENST00000495835 CAPRIN1Q14444 709 aaKnown RBP21.39■■□□□ 1.01
HLA-C-209ENST00000495835 Q5PR19 223 aa21.39■■□□□ 1.01
HLA-C-209ENST00000495835 OR7E24Q6IFN5 339 aa21.39■■□□□ 1.01
HLA-C-209ENST00000495835 SEZ6L2Q6UXD5 910 aa21.39■■□□□ 1.01
HLA-C-209ENST00000495835 UBE2J2Q8N2K1 259 aa21.39■■□□□ 1.01
HLA-C-209ENST00000495835 CADM2Q8N3J6 435 aa21.39■■□□□ 1.01
HLA-C-209ENST00000495835 STK35Q8TDR2 534 aa21.39■■□□□ 1.01
HLA-C-209ENST00000495835 AKAP1Q92667 903 aaKnown RBP eCLIP21.39■■□□□ 1.01
HLA-C-209ENST00000495835 SIKE1Q9BRV8 207 aa21.39■■□□□ 1.01
HLA-C-209ENST00000495835 SPATA5L1Q9BVQ7 753 aa21.39■■□□□ 1.01
HLA-C-209ENST00000495835 TAS2R16Q9NYV7 291 aa21.39■■□□□ 1.01
HLA-C-209ENST00000495835 FLVCR1Q9Y5Y0 555 aa21.39■■□□□ 1.01
HLA-C-209ENST00000495835 TRBV5-3A0A0A0MS03 114 aa21.38■■□□□ 1.01
HLA-C-209ENST00000495835 ZC3H12DA2A288 527 aaKnown RBP21.38■■□□□ 1.01
HLA-C-209ENST00000495835 LIPT2A6NK58 231 aa21.38■■□□□ 1.01
HLA-C-209ENST00000495835 EVPLLA8MZ36 301 aa21.38■■□□□ 1.01
HLA-C-209ENST00000495835 NR5A2O00482 541 aa21.38■■□□□ 1.01
HLA-C-209ENST00000495835 VAMP5O95183 116 aa21.38■■□□□ 1.01
HLA-C-209ENST00000495835 NUDT7P0C024 238 aa21.38■■□□□ 1.01
HLA-C-209ENST00000495835 ARAFP10398 606 aa21.38■■□□□ 1.01
HLA-C-209ENST00000495835 GPX2P18283 190 aa21.38■■□□□ 1.01
HLA-C-209ENST00000495835 PRKAR1BP31321 381 aa21.38■■□□□ 1.01
HLA-C-209ENST00000495835 AGKQ53H12 422 aa21.38■■□□□ 1.01
HLA-C-209ENST00000495835 PAGE3Q5JUK9 113 aa21.38■■□□□ 1.01
HLA-C-209ENST00000495835 REEP3Q6NUK4 255 aa21.38■■□□□ 1.01
HLA-C-209ENST00000495835 KRT73Q86Y46 540 aa21.38■■□□□ 1.01
HLA-C-209ENST00000495835 MSRB3Q8IXL7 192 aa21.38■■□□□ 1.01
HLA-C-209ENST00000495835 MAL2Q969L2 176 aa21.38■■□□□ 1.01
HLA-C-209ENST00000495835 TMEM45BQ96B21 275 aa21.38■■□□□ 1.01
HLA-C-209ENST00000495835 TAPBPLQ9BX59 468 aa21.38■■□□□ 1.01
HLA-C-209ENST00000495835 TMEM38AQ9H6F2 299 aa21.38■■□□□ 1.01
HLA-C-209ENST00000495835 C12orf10Q9HB07 376 aa21.38■■□□□ 1.01
HLA-C-209ENST00000495835 ZNF701Q9NV72 531 aaPredicted RBP21.38■■□□□ 1.01
HLA-C-209ENST00000495835 SLAMF8Q9P0V8 285 aa21.38■■□□□ 1.01
HLA-C-209ENST00000495835 TRIM33Q9UPN9 1127 aa21.38■■□□□ 1.01
HLA-C-209ENST00000495835 RAMP1O60894 148 aa21.37■■□□□ 1.01
HLA-C-209ENST00000495835 NTF4P34130 210 aa21.37■■□□□ 1.01
HLA-C-209ENST00000495835 CEACAM7Q14002 265 aa21.37■■□□□ 1.01
HLA-C-209ENST00000495835 STK11Q15831 433 aa21.37■■□□□ 1.01
HLA-C-209ENST00000495835 OTUD3Q5T2D3 398 aaPredicted RBP21.37■■□□□ 1.01
HLA-C-209ENST00000495835 GCNT6Q5T4J0 391 aa21.37■■□□□ 1.01
HLA-C-209ENST00000495835 ALKBH2Q6NS38 261 aa21.37■■□□□ 1.01
HLA-C-209ENST00000495835 SERPINA11Q86U17 422 aa21.37■■□□□ 1.01
HLA-C-209ENST00000495835 BHLHE22Q8NFJ8 381 aaPredicted RBP21.37■■□□□ 1.01
HLA-C-209ENST00000495835 TSPEARQ8WU66 669 aa21.37■■□□□ 1.01
HLA-C-209ENST00000495835 FBXW5Q969U6 566 aa21.37■■□□□ 1.01
HLA-C-209ENST00000495835 C3orf49Q96BT1 292 aa21.37■■□□□ 1.01
HLA-C-209ENST00000495835 DNAJA3Q96EY1 480 aa21.37■■□□□ 1.01
HLA-C-209ENST00000495835 RADILQ96JH8 1075 aa21.37■■□□□ 1.01
HLA-C-209ENST00000495835 MUS81Q96NY9 551 aa21.37■■□□□ 1.01
HLA-C-209ENST00000495835 EVA1AQ9H8M9 152 aa21.37■■□□□ 1.01
HLA-C-209ENST00000495835 VAPAQ9P0L0 249 aa21.37■■□□□ 1.01
HLA-C-209ENST00000495835 DCTN4Q9UJW0 460 aa21.37■■□□□ 1.01
HLA-C-209ENST00000495835 CIB4A0PJX0 185 aa21.36■■□□□ 1.01
HLA-C-209ENST00000495835 AQP7P3A6NL99 342 aa21.36■■□□□ 1.01
HLA-C-209ENST00000495835 NPIPB7O75200 414 aa21.36■■□□□ 1.01
HLA-C-209ENST00000495835 PRG2P13727 222 aa21.36■■□□□ 1.01
HLA-C-209ENST00000495835 PTH2RP49190 550 aa21.36■■□□□ 1.01
HLA-C-209ENST00000495835 CDK6Q00534 326 aa21.36■■□□□ 1.01
HLA-C-209ENST00000495835 ZC3HAV1Q7Z2W4 902 aaKnown RBP21.36■■□□□ 1.01
HLA-C-209ENST00000495835 ATG4DQ86TL0 474 aaPredicted RBP21.36■■□□□ 1.01
HLA-C-209ENST00000495835 LSMEM1Q8N8F7 131 aa21.36■■□□□ 1.01
HLA-C-209ENST00000495835 LILRB1Q8NHL6 650 aaPredicted RBP21.36■■□□□ 1.01
HLA-C-209ENST00000495835 BDH2Q9BUT1 245 aa21.36■■□□□ 1.01
HLA-C-209ENST00000495835 DPRXA6NFQ7 191 aa21.35■■□□□ 1.01
HLA-C-209ENST00000495835 FAM171A2A8MVW0 826 aa21.35■■□□□ 1.01
HLA-C-209ENST00000495835 TMEM229AB2RXF0 380 aa21.35■■□□□ 1.01
HLA-C-209ENST00000495835 PDLIM1O00151 329 aa21.35■■□□□ 1.01
HLA-C-209ENST00000495835 BSPH1Q075Z2 132 aa21.35■■□□□ 1.01
HLA-C-209ENST00000495835 OR7A5Q15622 319 aa21.35■■□□□ 1.01
HLA-C-209ENST00000495835 ZNF672Q499Z4 452 aaPredicted RBP21.35■■□□□ 1.01
HLA-C-209ENST00000495835 C1orf140Q5VVS0 124 aa21.35■■□□□ 1.01
HLA-C-209ENST00000495835 METTL21CQ5VZV1 264 aa21.35■■□□□ 1.01
HLA-C-209ENST00000495835 DHRS4L2Q6PKH6 230 aa21.35■■□□□ 1.01
HLA-C-209ENST00000495835 C5orf46Q6UWT4 87 aa21.35■■□□□ 1.01
HLA-C-209ENST00000495835 CASP12Q6UXS9 341 aa21.35■■□□□ 1.01
HLA-C-209ENST00000495835 TMEM99Q8N816 258 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms