RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 DTX3LQ8TDB6 740 aa2.48□□□□□ -2.01
PHC3-213ENST00000491258 SLC37A2Q8TED4 501 aa2.48□□□□□ -2.01
PHC3-213ENST00000491258 ART4Q93070 314 aa2.48□□□□□ -2.01
PHC3-213ENST00000491258 IMP4Q96G21 291 aaKnown RBP2.48□□□□□ -2.01
PHC3-213ENST00000491258 MAGEB18Q96M61 343 aa2.48□□□□□ -2.01
PHC3-213ENST00000491258 ANKRD27Q96NW4 1050 aa2.48□□□□□ -2.01
PHC3-213ENST00000491258 RNF157Q96PX1 679 aa2.48□□□□□ -2.01
PHC3-213ENST00000491258 MLPHQ9BV36 600 aaPredicted RBP2.48□□□□□ -2.01
PHC3-213ENST00000491258 SLC25A51Q9H1U9 297 aa2.48□□□□□ -2.01
PHC3-213ENST00000491258 OR2AG1Q9H205 316 aa2.48□□□□□ -2.01
PHC3-213ENST00000491258 CARD9Q9H257 536 aa2.48□□□□□ -2.01
PHC3-213ENST00000491258 CLMPQ9H6B4 373 aa2.48□□□□□ -2.01
PHC3-213ENST00000491258 UCK1Q9HA47 277 aa2.48□□□□□ -2.01
PHC3-213ENST00000491258 SLC40A1Q9NP59 571 aa2.48□□□□□ -2.01
PHC3-213ENST00000491258 IL26Q9NPH9 171 aa2.48□□□□□ -2.01
PHC3-213ENST00000491258 FBXO8Q9NRD0 319 aa2.48□□□□□ -2.01
PHC3-213ENST00000491258 SLC39A1Q9NY26 324 aa2.48□□□□□ -2.01
PHC3-213ENST00000491258 PKD2L2Q9NZM6 624 aa2.48□□□□□ -2.01
PHC3-213ENST00000491258 IFNKQ9P0W0 207 aa2.48□□□□□ -2.01
PHC3-213ENST00000491258 UVRAGQ9P2Y5 699 aa2.48□□□□□ -2.01
PHC3-213ENST00000491258 ATXN10Q9UBB4 475 aa2.48□□□□□ -2.01
PHC3-213ENST00000491258 SLC23A2Q9UGH3 650 aa2.48□□□□□ -2.01
PHC3-213ENST00000491258 LCMT1Q9UIC8 334 aa2.48□□□□□ -2.01
PHC3-213ENST00000491258 ABCG2Q9UNQ0 655 aa2.48□□□□□ -2.01
PHC3-213ENST00000491258 KCNK6Q9Y257 313 aa2.48□□□□□ -2.01
PHC3-213ENST00000491258 PCNX1Q96RV3 2341 aa2.48□□□□□ -2.01
PHC3-213ENST00000491258 SPTAN1Q13813 2472 aaKnown RBP2.48□□□□□ -2.01
PHC3-213ENST00000491258 AKAP13Q12802 2813 aa2.48□□□□□ -2.01
PHC3-213ENST00000491258 LOC285095A0A1B0GVY8 99 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 SYCE3A1L190 88 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 LRRD1A4D1F6 860 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 GPR89AB7ZAQ6 455 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 POLR1CO15160 346 aaPredicted RBP2.47□□□□□ -2.01
PHC3-213ENST00000491258 KMOO15229 486 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 TOX3O15405 576 aaPredicted RBP2.47□□□□□ -2.01
PHC3-213ENST00000491258 LRRTM2O43300 516 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 DUX1O43812 170 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 VEGFDO43915 354 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 UGT1A9O60656 530 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 MTX2O75431 263 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 POP7O75817 140 aaKnown RBP2.47□□□□□ -2.01
PHC3-213ENST00000491258 STK17BO94768 372 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 CDK14O94921 469 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 SLC25A14O95258 325 aaPredicted RBP2.47□□□□□ -2.01
PHC3-213ENST00000491258 EPOP01588 193 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 ANKRD34CP0C6C1 535 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 PIRTP0C851 137 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 GPR89BP0CG08 455 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 ZNF7P17097 686 aaPredicted RBP2.47□□□□□ -2.01
PHC3-213ENST00000491258 NELFEP18615 380 aaKnown RBP2.47□□□□□ -2.01
PHC3-213ENST00000491258 UGT1A6P19224 532 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 F8A1P23610 371 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 DUTP33316 252 aaKnown RBP2.47□□□□□ -2.01
PHC3-213ENST00000491258 CA5AP35218 305 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 HMGCLP35914 325 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 HSD17B3P37058 310 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 FEN1P39748 380 aaKnown RBP2.47□□□□□ -2.01
PHC3-213ENST00000491258 CDKN2BP42772 138 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 SLC1A1P43005 524 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 CLDN17P56750 224 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 TPM4P67936 248 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 WASHC5Q12768 1159 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 MESDQ14696 234 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 CHRNA6Q15825 494 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 IGFBP7Q16270 282 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 TAZQ16635 292 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 TEX44Q53QW1 395 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 PDPK2PQ6A1A2 396 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 KDELC1Q6UW63 502 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 ABRAXAS1Q6UWZ7 409 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 MFSD7Q6UXD7 560 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 TMEM26Q6ZUK4 368 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 Q6ZVQ6 151 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 PRSS42Q7Z5A4 293 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 ZNF547Q8IVP9 402 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 CNPY4Q8N129 248 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 TRAM1L1Q8N609 369 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 CCDC63Q8NA47 563 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 CCDC112Q8NEF3 446 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 CTNNBL1Q8WYA6 563 aaPredicted RBP2.47□□□□□ -2.01
PHC3-213ENST00000491258 GLYATL1Q969I3 302 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 SPSB1Q96BD6 273 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 PYCR2Q96C36 320 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 HDAC11Q96DB2 347 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 C9orf72Q96LT7 481 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 OLFM3Q96PB7 478 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 ALKBH3Q96Q83 286 aaPredicted RBP2.47□□□□□ -2.01
PHC3-213ENST00000491258 CHP1Q99653 195 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 RTBDNQ9BSG5 229 aaPredicted RBP2.47□□□□□ -2.01
PHC3-213ENST00000491258 ZSCAN5AQ9BUG6 496 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 SPATA16Q9BXB7 569 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 TBC1D10AQ9BXI6 508 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 TRIM4Q9C037 500 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 XPO4Q9C0E2 1151 aaKnown RBP2.47□□□□□ -2.01
PHC3-213ENST00000491258 NHEJ1Q9H9Q4 299 aaPredicted RBP2.47□□□□□ -2.01
PHC3-213ENST00000491258 UGT1A7Q9HAW7 530 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 UGT1A10Q9HAW8 530 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 UGT1A8Q9HAW9 530 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 APMAPQ9HDC9 416 aa2.47□□□□□ -2.01
PHC3-213ENST00000491258 NFKBIL1Q9UBC1 381 aaPredicted RBP2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms