RNA–Protein interactions for RNA: ENST00000488443.1

UBAP2-211, Transcript of ubiquitin associated protein 2, humanhuman

TSL 5

Gene UBAP2, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP2-211ENST00000488443 MAD2L1Q13257 205 aaPredicted RBP11.62□□□□□ -0.55
UBAP2-211ENST00000488443 CEACAM7Q14002 265 aa11.62□□□□□ -0.55
UBAP2-211ENST00000488443 OR7A5Q15622 319 aa11.62□□□□□ -0.55
UBAP2-211ENST00000488443 SYPL1Q16563 259 aa11.62□□□□□ -0.55
UBAP2-211ENST00000488443 AAED1Q7RTV5 226 aa11.62□□□□□ -0.55
UBAP2-211ENST00000488443 RNF130Q86XS8 419 aa11.62□□□□□ -0.55
UBAP2-211ENST00000488443 FAM71CQ8NEG0 241 aa11.62□□□□□ -0.55
UBAP2-211ENST00000488443 PROX1Q92786 737 aa11.62□□□□□ -0.55
UBAP2-211ENST00000488443 MSI2Q96DH6 328 aaKnown RBP11.62□□□□□ -0.55
UBAP2-211ENST00000488443 AURKBQ96GD4 344 aaPredicted RBP11.62□□□□□ -0.55
UBAP2-211ENST00000488443 FOXN4Q96NZ1 517 aa11.62□□□□□ -0.55
UBAP2-211ENST00000488443 ZNF385AQ96PM9 386 aaKnown RBP11.62□□□□□ -0.55
UBAP2-211ENST00000488443 AKTIPQ9H8T0 292 aa11.62□□□□□ -0.55
UBAP2-211ENST00000488443 PPCSQ9HAB8 311 aa11.62□□□□□ -0.55
UBAP2-211ENST00000488443 MKS1Q9NXB0 559 aa11.62□□□□□ -0.55
UBAP2-211ENST00000488443 OSGIN1Q9UJX0 560 aa11.62□□□□□ -0.55
UBAP2-211ENST00000488443 PRAMEF27A3QJZ7 478 aa11.61□□□□□ -0.55
UBAP2-211ENST00000488443 LRP5LA4QPB2 252 aa11.61□□□□□ -0.55
UBAP2-211ENST00000488443 RNASET2O00584 256 aaKnown RBP11.61□□□□□ -0.55
UBAP2-211ENST00000488443 LGI1O95970 557 aa11.61□□□□□ -0.55
UBAP2-211ENST00000488443 WNT11O96014 354 aa11.61□□□□□ -0.55
UBAP2-211ENST00000488443 TGFAP01135 160 aa11.61□□□□□ -0.55
UBAP2-211ENST00000488443 GKN3PP0CG01 181 aa11.61□□□□□ -0.55
UBAP2-211ENST00000488443 NR4A2P43354 598 aa11.61□□□□□ -0.55
UBAP2-211ENST00000488443 POLR2HP52434 150 aaKnown RBP11.61□□□□□ -0.55
UBAP2-211ENST00000488443 SLC16A1P53985 500 aa11.61□□□□□ -0.55
UBAP2-211ENST00000488443 TGFBR3Q03167 851 aa11.61□□□□□ -0.55
UBAP2-211ENST00000488443 BNIP2Q12982 314 aa11.61□□□□□ -0.55
UBAP2-211ENST00000488443 SPANXN4Q5MJ08 99 aa11.61□□□□□ -0.55
UBAP2-211ENST00000488443 CADM2Q8N3J6 435 aa11.61□□□□□ -0.55
UBAP2-211ENST00000488443 TMEM99Q8N816 258 aa11.61□□□□□ -0.55
UBAP2-211ENST00000488443 ZNF781Q8N8C0 355 aa11.61□□□□□ -0.55
UBAP2-211ENST00000488443 WDR60Q8WVS4 1066 aa11.61□□□□□ -0.55
UBAP2-211ENST00000488443 ALKBH3Q96Q83 286 aaPredicted RBP11.61□□□□□ -0.55
UBAP2-211ENST00000488443 PRR14Q9BWN1 585 aa11.61□□□□□ -0.55
UBAP2-211ENST00000488443 ADPRHL2Q9NX46 363 aa11.61□□□□□ -0.55
UBAP2-211ENST00000488443 DCTN4Q9UJW0 460 aa11.61□□□□□ -0.55
UBAP2-211ENST00000488443 A0A096LPE4 126 aa11.6□□□□□ -0.55
UBAP2-211ENST00000488443 IGHV1-18A0A0C4DH31 117 aa11.6□□□□□ -0.55
UBAP2-211ENST00000488443 A0A1W2PPZ6 126 aa11.6□□□□□ -0.55
UBAP2-211ENST00000488443 PDLIM1O00151 329 aa11.6□□□□□ -0.55
UBAP2-211ENST00000488443 NR5A2O00482 541 aa11.6□□□□□ -0.55
UBAP2-211ENST00000488443 AGR2O95994 175 aa11.6□□□□□ -0.55
UBAP2-211ENST00000488443 GSNP06396 782 aa11.6□□□□□ -0.55
UBAP2-211ENST00000488443 BPGMP07738 259 aa11.6□□□□□ -0.55
UBAP2-211ENST00000488443 CHRM4P08173 479 aa11.6□□□□□ -0.55
UBAP2-211ENST00000488443 HNF1AP20823 631 aa11.6□□□□□ -0.55
UBAP2-211ENST00000488443 MPGP29372 298 aa11.6□□□□□ -0.55
UBAP2-211ENST00000488443 SLC17A1Q14916 467 aa11.6□□□□□ -0.55
UBAP2-211ENST00000488443 CHI3L2Q15782 390 aa11.6□□□□□ -0.55
UBAP2-211ENST00000488443 MST1LQ2TV78 715 aa11.6□□□□□ -0.55
UBAP2-211ENST00000488443 SAXO2Q658L1 398 aa11.6□□□□□ -0.55
UBAP2-211ENST00000488443 NUDCD3Q8IVD9 361 aa11.6□□□□□ -0.55
UBAP2-211ENST00000488443 OR9K2Q8NGE7 335 aa11.6□□□□□ -0.55
UBAP2-211ENST00000488443 MIPOL1Q8TD10 442 aa11.6□□□□□ -0.55
UBAP2-211ENST00000488443 BPESC1Q9GZL8 116 aa11.6□□□□□ -0.55
UBAP2-211ENST00000488443 SEC61A2Q9H9S3 476 aa11.6□□□□□ -0.55
UBAP2-211ENST00000488443 PARPBPQ9NWS1 579 aa11.6□□□□□ -0.55
UBAP2-211ENST00000488443 TMEM160Q9NX00 188 aa11.6□□□□□ -0.55
UBAP2-211ENST00000488443 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.59□□□□□ -0.552e-6■■□□□ 11.6
UBAP2-211ENST00000488443 PRSS51A0A1B0GVH4 220 aa11.59□□□□□ -0.55
UBAP2-211ENST00000488443 SH3PXD2BA1X283 911 aa11.59□□□□□ -0.55
UBAP2-211ENST00000488443 HMGN4O00479 90 aa11.59□□□□□ -0.55
UBAP2-211ENST00000488443 DNPH1O43598 174 aa11.59□□□□□ -0.55
UBAP2-211ENST00000488443 EIF1BO60739 113 aaKnown RBP11.59□□□□□ -0.55
UBAP2-211ENST00000488443 NR2F1P10589 423 aa11.59□□□□□ -0.55
UBAP2-211ENST00000488443 IL7RP16871 459 aa11.59□□□□□ -0.55
UBAP2-211ENST00000488443 CXCR1P25024 350 aa11.59□□□□□ -0.55
UBAP2-211ENST00000488443 S100A3P33764 101 aa11.59□□□□□ -0.55
UBAP2-211ENST00000488443 HTR3AP46098 478 aa11.59□□□□□ -0.55
UBAP2-211ENST00000488443 UBE2NP61088 152 aaKnown RBP11.59□□□□□ -0.55
UBAP2-211ENST00000488443 CR1LQ2VPA4 569 aa11.59□□□□□ -0.55
UBAP2-211ENST00000488443 TBRG1Q3YBR2 411 aa11.59□□□□□ -0.55
UBAP2-211ENST00000488443 FAM174BQ3ZCQ3 159 aa11.59□□□□□ -0.55
UBAP2-211ENST00000488443 MRPL2Q5T653 305 aaKnown RBP11.59□□□□□ -0.55
UBAP2-211ENST00000488443 ANXA8L1Q5VT79 327 aa11.59□□□□□ -0.55
UBAP2-211ENST00000488443 NIPAL3Q6P499 406 aa11.59□□□□□ -0.55
UBAP2-211ENST00000488443 ZCCHC24Q8N2G6 241 aaKnown RBP11.59□□□□□ -0.55
UBAP2-211ENST00000488443 C17orf78Q8N4C9 275 aa11.59□□□□□ -0.55
UBAP2-211ENST00000488443 C1orf162Q8NEQ5 155 aaPredicted RBP11.59□□□□□ -0.55
UBAP2-211ENST00000488443 VPS37AQ8NEZ2 397 aa11.59□□□□□ -0.55
UBAP2-211ENST00000488443 SLC38A2Q96QD8 506 aa11.59□□□□□ -0.55
UBAP2-211ENST00000488443 SOX7Q9BT81 388 aa11.59□□□□□ -0.55
UBAP2-211ENST00000488443 NUF2Q9BZD4 464 aa11.59□□□□□ -0.55
UBAP2-211ENST00000488443 EXOSC3Q9NQT5 275 aaKnown RBP11.59□□□□□ -0.55
UBAP2-211ENST00000488443 POLE3Q9NRF9 147 aa11.59□□□□□ -0.55
UBAP2-211ENST00000488443 RLIMQ9NVW2 624 aa11.59□□□□□ -0.55
UBAP2-211ENST00000488443 TRAPPC4Q9Y296 219 aa11.59□□□□□ -0.55
UBAP2-211ENST00000488443 CFAP73A6NFT4 308 aa11.58□□□□□ -0.56
UBAP2-211ENST00000488443 VWC2LB2RUY7 222 aa11.58□□□□□ -0.56
UBAP2-211ENST00000488443 ZNF587BE7ETH6 402 aa11.58□□□□□ -0.56
UBAP2-211ENST00000488443 GPIP06744 558 aa11.58□□□□□ -0.56
UBAP2-211ENST00000488443 OR4A8P0C604 315 aa11.58□□□□□ -0.56
UBAP2-211ENST00000488443 SERPINB5P36952 375 aa11.58□□□□□ -0.56
UBAP2-211ENST00000488443 SERPINF1P36955 418 aa11.58□□□□□ -0.56
UBAP2-211ENST00000488443 CDKN2CP42773 168 aa11.58□□□□□ -0.56
UBAP2-211ENST00000488443 CLK1P49759 484 aaKnown RBP11.58□□□□□ -0.56
UBAP2-211ENST00000488443 SELENOPP49908 381 aa11.58□□□□□ -0.56
UBAP2-211ENST00000488443 H3F3AP84243 136 aa11.58□□□□□ -0.56
UBAP2-211ENST00000488443 SWI5Q1ZZU3 235 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms