RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 SH3BGRP55822 239 aaPredicted RBP6.6□□□□□ -1.35
PDPN-205ENST00000487038 TMEM33P57088 247 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 NAA20P61599 178 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 ZP4Q12836 540 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 DAG1Q14118 895 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 SPDYE7PQ495Y7 208 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 ZNF385BQ569K4 471 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 ELFN2Q5R3F8 820 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 PAQR6Q6TCH4 344 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 EIF3MQ7L2H7 374 aaKnown RBP6.6□□□□□ -1.35
PDPN-205ENST00000487038 AAED1Q7RTV5 226 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 TRIM46Q7Z4K8 759 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 R3HCC1LQ7Z5L2 792 aaKnown RBP6.6□□□□□ -1.35
PDPN-205ENST00000487038 LCA5Q86VQ0 697 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 GAS2L3Q86XJ1 694 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 ADGRG3Q86Y34 549 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 CDK20Q8IZL9 346 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 IL17RDQ8NFM7 739 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 MAGEE2Q8TD90 523 aaPredicted RBP6.6□□□□□ -1.35
PDPN-205ENST00000487038 OIT3Q8WWZ8 545 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 PMM1Q92871 262 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 MTERF3Q96E29 417 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 L3HYPDHQ96EM0 354 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 DNAJA3Q96EY1 480 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 EGLN2Q96KS0 407 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 ALKBH3Q96Q83 286 aaPredicted RBP6.6□□□□□ -1.35
PDPN-205ENST00000487038 CCDC106Q9BWC9 280 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 TMPRSS13Q9BYE2 586 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 NMUR2Q9GZQ4 415 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 PIF1Q9H611 641 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 ACSS3Q9H6R3 686 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 G6PC2Q9NQR9 355 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 CTPS2Q9NRF8 586 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 ZNF275Q9NSD4 429 aaPredicted RBP6.6□□□□□ -1.35
PDPN-205ENST00000487038 TREM2Q9NZC2 230 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 SLC35A3Q9Y2D2 325 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 DUXAA6NLW8 204 aa6.59□□□□□ -1.35
PDPN-205ENST00000487038 ZNF208O43345 1280 aa6.59□□□□□ -1.35
PDPN-205ENST00000487038 RAD51CO43502 376 aa6.59□□□□□ -1.35
PDPN-205ENST00000487038 AKAP10O43572 662 aa6.59□□□□□ -1.35
PDPN-205ENST00000487038 STX11O75558 287 aa6.59□□□□□ -1.35
PDPN-205ENST00000487038 URI1O94763 535 aaPredicted RBP6.59□□□□□ -1.35
PDPN-205ENST00000487038 LGI1O95970 557 aa6.59□□□□□ -1.35
PDPN-205ENST00000487038 GSNP06396 782 aa6.59□□□□□ -1.35
PDPN-205ENST00000487038 SBK3P0C264 359 aa6.59□□□□□ -1.35
PDPN-205ENST00000487038 ADRA2CP18825 462 aa6.59□□□□□ -1.35
PDPN-205ENST00000487038 GCH1P30793 250 aa6.59□□□□□ -1.35
PDPN-205ENST00000487038 ARR3P36575 388 aa6.59□□□□□ -1.35
PDPN-205ENST00000487038 HPCAL1P37235 193 aa6.59□□□□□ -1.35
PDPN-205ENST00000487038 ASMTP46597 345 aa6.59□□□□□ -1.35
PDPN-205ENST00000487038 MAP2K6P52564 334 aa6.59□□□□□ -1.35
PDPN-205ENST00000487038 MRPS25P82663 173 aaKnown RBP6.59□□□□□ -1.35
PDPN-205ENST00000487038 MRPS11P82912 194 aaKnown RBP6.59□□□□□ -1.35
PDPN-205ENST00000487038 H3F3AP84243 136 aa6.59□□□□□ -1.35
PDPN-205ENST00000487038 NPRL3Q12980 569 aa6.59□□□□□ -1.35
PDPN-205ENST00000487038 PDE7AQ13946 482 aa6.59□□□□□ -1.35
PDPN-205ENST00000487038 SLC17A1Q14916 467 aa6.59□□□□□ -1.35
PDPN-205ENST00000487038 GPR68Q15743 365 aa6.59□□□□□ -1.35
PDPN-205ENST00000487038 FAM153CQ494X1 144 aa6.59□□□□□ -1.35
PDPN-205ENST00000487038 MMEL1Q495T6 779 aa6.59□□□□□ -1.35
PDPN-205ENST00000487038 KRT80Q6KB66 452 aa6.59□□□□□ -1.35
PDPN-205ENST00000487038 RIBC1Q8N443 379 aaPredicted RBP6.59□□□□□ -1.35
PDPN-205ENST00000487038 NATD1Q8N6N6 113 aa6.59□□□□□ -1.35
PDPN-205ENST00000487038 SFXN5Q8TD22 340 aa6.59□□□□□ -1.35
PDPN-205ENST00000487038 SLC25A28Q96A46 364 aa6.59□□□□□ -1.35
PDPN-205ENST00000487038 ZNF524Q96C55 264 aa6.59□□□□□ -1.35
PDPN-205ENST00000487038 CCDC126Q96EE4 140 aa6.59□□□□□ -1.35
PDPN-205ENST00000487038 AURKBQ96GD4 344 aaPredicted RBP6.59□□□□□ -1.35
PDPN-205ENST00000487038 TSSK3Q96PN8 268 aa6.59□□□□□ -1.35
PDPN-205ENST00000487038 PAFAH2Q99487 392 aa6.59□□□□□ -1.35
PDPN-205ENST00000487038 GPA33Q99795 319 aa6.59□□□□□ -1.35
PDPN-205ENST00000487038 SF3B5Q9BWJ5 86 aaKnown RBP6.59□□□□□ -1.35
PDPN-205ENST00000487038 RACGAP1Q9H0H5 632 aa6.59□□□□□ -1.35
PDPN-205ENST00000487038 ZNF385DQ9H6B1 395 aa6.59□□□□□ -1.35
PDPN-205ENST00000487038 ZNF665Q9H7R5 613 aa6.59□□□□□ -1.35
PDPN-205ENST00000487038 C1orf109Q9NX04 203 aa6.59□□□□□ -1.35
PDPN-205ENST00000487038 REV1Q9UBZ9 1251 aa6.59□□□□□ -1.35
PDPN-205ENST00000487038 TMED5Q9Y3A6 229 aa6.59□□□□□ -1.35
PDPN-205ENST00000487038 NOX1Q9Y5S8 564 aa6.59□□□□□ -1.35
PDPN-205ENST00000487038 TANC2Q9HCD6 1990 aa6.58□□□□□ -1.36
PDPN-205ENST00000487038 IGHV2OR16-5A0A0B4J2B6 119 aa6.58□□□□□ -1.36
PDPN-205ENST00000487038 TMEM129A0AVI4 362 aa6.58□□□□□ -1.36
PDPN-205ENST00000487038 DNAJC9-AS1A6NH13 148 aa6.58□□□□□ -1.36
PDPN-205ENST00000487038 TRIM49D1C9J1S8 452 aa6.58□□□□□ -1.36
PDPN-205ENST00000487038 SLC28A1O00337 649 aa6.58□□□□□ -1.36
PDPN-205ENST00000487038 SKAP2O75563 359 aaPredicted RBP6.58□□□□□ -1.36
PDPN-205ENST00000487038 UGT2B17O75795 530 aa6.58□□□□□ -1.36
PDPN-205ENST00000487038 AVPP01185 164 aa6.58□□□□□ -1.36
PDPN-205ENST00000487038 GPIP06744 558 aa6.58□□□□□ -1.36
PDPN-205ENST00000487038 NUDT17P0C025 328 aa6.58□□□□□ -1.36
PDPN-205ENST00000487038 NEFHP12036 1026 aa6.58□□□□□ -1.36
PDPN-205ENST00000487038 UQCRBP14927 111 aa6.58□□□□□ -1.36
PDPN-205ENST00000487038 CBR1P16152 277 aa6.58□□□□□ -1.36
PDPN-205ENST00000487038 SDC1P18827 310 aa6.58□□□□□ -1.36
PDPN-205ENST00000487038 CAPZA2P47755 286 aa6.58□□□□□ -1.36
PDPN-205ENST00000487038 CCT3P49368 545 aaKnown RBP6.58□□□□□ -1.36
PDPN-205ENST00000487038 PRKAA2P54646 552 aa6.58□□□□□ -1.36
PDPN-205ENST00000487038 FOXA1P55317 472 aa6.58□□□□□ -1.36
PDPN-205ENST00000487038 RPS23P62266 143 aaKnown RBP6.58□□□□□ -1.36
PDPN-205ENST00000487038 RPL38P63173 70 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms