RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 AQP12AQ8IXF9 295 aa17■□□□□ 0.31
CTDSP1-207ENST00000473420 OFCC1Q8IZS5 231 aa17■□□□□ 0.31
CTDSP1-207ENST00000473420 C9orf106Q8NAJ2 232 aa17■□□□□ 0.31
CTDSP1-207ENST00000473420 OR6S1Q8NH40 331 aa17■□□□□ 0.31
CTDSP1-207ENST00000473420 FNDC9Q8TBE3 224 aa17■□□□□ 0.31
CTDSP1-207ENST00000473420 ZHX1-C8orf76Q96EF9 292 aa17■□□□□ 0.31
CTDSP1-207ENST00000473420 EPYCQ99645 322 aa17■□□□□ 0.31
CTDSP1-207ENST00000473420 ZNF426Q9BUY5 554 aa17■□□□□ 0.31
CTDSP1-207ENST00000473420 MAGIXQ9H6Y5 334 aa17■□□□□ 0.31
CTDSP1-207ENST00000473420 RNF122Q9H9V4 155 aa17■□□□□ 0.31
CTDSP1-207ENST00000473420 SLC7A8Q9UHI5 535 aa17■□□□□ 0.31
CTDSP1-207ENST00000473420 RIMS3Q9UJD0 308 aa17■□□□□ 0.31
CTDSP1-207ENST00000473420 POMPQ9Y244 141 aa17■□□□□ 0.31
CTDSP1-207ENST00000473420 GCN1Q92616 2671 aaKnown RBP16.99■□□□□ 0.31
CTDSP1-207ENST00000473420 TENM4Q6N022 2769 aa16.99■□□□□ 0.31
CTDSP1-207ENST00000473420 IGKV1D-42A0A075B6H8 117 aa16.99■□□□□ 0.31
CTDSP1-207ENST00000473420 OR2T1O43869 369 aa16.99■□□□□ 0.31
CTDSP1-207ENST00000473420 EIF1BO60739 113 aaKnown RBP16.99■□□□□ 0.31
CTDSP1-207ENST00000473420 FZD7O75084 574 aa16.99■□□□□ 0.31
CTDSP1-207ENST00000473420 GPIP06744 558 aa16.99■□□□□ 0.31
CTDSP1-207ENST00000473420 CRHP06850 196 aa16.99■□□□□ 0.31
CTDSP1-207ENST00000473420 ENPP1P22413 925 aa16.99■□□□□ 0.31
CTDSP1-207ENST00000473420 RBM34P42696 430 aaKnown RBP16.99■□□□□ 0.31
CTDSP1-207ENST00000473420 AGFG1P52594 562 aaKnown RBP16.99■□□□□ 0.31
CTDSP1-207ENST00000473420 SLC35A1P78382 337 aa16.99■□□□□ 0.31
CTDSP1-207ENST00000473420 VLDLRP98155 873 aa16.99■□□□□ 0.31
CTDSP1-207ENST00000473420 FLOT2Q14254 428 aa16.99■□□□□ 0.31
CTDSP1-207ENST00000473420 TTC33Q6PID6 262 aaPredicted RBP16.99■□□□□ 0.31
CTDSP1-207ENST00000473420 TSEN54Q7Z6J9 526 aaKnown RBP16.99■□□□□ 0.31
CTDSP1-207ENST00000473420 YTHDF3Q7Z739 585 aaKnown RBP16.99■□□□□ 0.31
CTDSP1-207ENST00000473420 MFSD8Q8NHS3 518 aa16.99■□□□□ 0.31
CTDSP1-207ENST00000473420 RNF128Q8TEB7 428 aa16.99■□□□□ 0.31
CTDSP1-207ENST00000473420 ASB5Q8WWX0 329 aa16.99■□□□□ 0.31
CTDSP1-207ENST00000473420 ZNF300Q96RE9 604 aaPredicted RBP16.99■□□□□ 0.31
CTDSP1-207ENST00000473420 PRSS27Q9BQR3 290 aa16.99■□□□□ 0.31
CTDSP1-207ENST00000473420 TAPBPLQ9BX59 468 aa16.99■□□□□ 0.31
CTDSP1-207ENST00000473420 PRRG4Q9BZD6 226 aa16.99■□□□□ 0.31
CTDSP1-207ENST00000473420 SLC19A3Q9BZV2 496 aa16.99■□□□□ 0.31
CTDSP1-207ENST00000473420 COQ3Q9NZJ6 369 aa16.99■□□□□ 0.31
CTDSP1-207ENST00000473420 V9GYQ6 96 aa16.99■□□□□ 0.31
CTDSP1-207ENST00000473420 DIDO1Q9BTC0 2240 aaKnown RBP16.98■□□□□ 0.31
CTDSP1-207ENST00000473420 TRAV36DV7A0A075B6V5 113 aa16.98■□□□□ 0.31
CTDSP1-207ENST00000473420 A0A0G2JNJ9 132 aa16.98■□□□□ 0.31
CTDSP1-207ENST00000473420 LIPT2A6NK58 231 aa16.98■□□□□ 0.31
CTDSP1-207ENST00000473420 PRSS23O95084 383 aa16.98■□□□□ 0.31
CTDSP1-207ENST00000473420 FABP3P05413 133 aa16.98■□□□□ 0.31
CTDSP1-207ENST00000473420 HOXB6P17509 224 aaKnown RBP16.98■□□□□ 0.31
CTDSP1-207ENST00000473420 RHCEP18577 417 aa16.98■□□□□ 0.31
CTDSP1-207ENST00000473420 RNPS1Q15287 305 aaKnown RBP16.98■□□□□ 0.31
CTDSP1-207ENST00000473420 IQCCQ4KMZ1 466 aa16.98■□□□□ 0.31
CTDSP1-207ENST00000473420 FAM69AQ5T7M9 428 aa16.98■□□□□ 0.31
CTDSP1-207ENST00000473420 GTF2IRD2BQ6EKJ0 949 aa16.98■□□□□ 0.31
CTDSP1-207ENST00000473420 PLXDC2Q6UX71 529 aa16.98■□□□□ 0.31
CTDSP1-207ENST00000473420 WDR88Q6ZMY6 472 aa16.98■□□□□ 0.31
CTDSP1-207ENST00000473420 FCRLAQ7L513 359 aa16.98■□□□□ 0.31
CTDSP1-207ENST00000473420 GTF2IRD2Q86UP8 949 aa16.98■□□□□ 0.31
CTDSP1-207ENST00000473420 SLC43A2Q8N370 569 aa16.98■□□□□ 0.31
CTDSP1-207ENST00000473420 ZNF808Q8N4W9 903 aaPredicted RBP16.98■□□□□ 0.31
CTDSP1-207ENST00000473420 HS6ST2Q96MM7 605 aa16.98■□□□□ 0.31
CTDSP1-207ENST00000473420 PTDSS2Q9BVG9 487 aa16.98■□□□□ 0.31
CTDSP1-207ENST00000473420 FNDC11Q9BVV2 318 aa16.98■□□□□ 0.31
CTDSP1-207ENST00000473420 ANKRD19PQ9H560 264 aa16.98■□□□□ 0.31
CTDSP1-207ENST00000473420 GP6Q9HCN6 339 aa16.98■□□□□ 0.31
CTDSP1-207ENST00000473420 IL1RAPQ9NPH3 570 aa16.98■□□□□ 0.31
CTDSP1-207ENST00000473420 GLRX2Q9NS18 164 aa16.98■□□□□ 0.31
CTDSP1-207ENST00000473420 NDUFAF4Q9P032 175 aa16.98■□□□□ 0.31
CTDSP1-207ENST00000473420 Q9UFV3 132 aa16.98■□□□□ 0.31
CTDSP1-207ENST00000473420 RNF6Q9Y252 685 aa16.98■□□□□ 0.31
CTDSP1-207ENST00000473420 FAM32AQ9Y421 112 aaKnown RBP16.98■□□□□ 0.31
CTDSP1-207ENST00000473420 FTCDNL1E5RQL4 147 aa16.97■□□□□ 0.31
CTDSP1-207ENST00000473420 J3KTA2 159 aa16.97■□□□□ 0.31
CTDSP1-207ENST00000473420 FFAR1O14842 300 aa16.97■□□□□ 0.31
CTDSP1-207ENST00000473420 SMAD9O15198 467 aaKnown RBP16.97■□□□□ 0.31
CTDSP1-207ENST00000473420 ZG16O60844 167 aa16.97■□□□□ 0.31
CTDSP1-207ENST00000473420 AQP8O94778 261 aa16.97■□□□□ 0.31
CTDSP1-207ENST00000473420 IGF2P01344 180 aa16.97■□□□□ 0.31
CTDSP1-207ENST00000473420 TMIGD3P0DMS9 266 aaPredicted RBP16.97■□□□□ 0.31
CTDSP1-207ENST00000473420 UMPSP11172 480 aa16.97■□□□□ 0.31
CTDSP1-207ENST00000473420 CHRNB4P30926 498 aa16.97■□□□□ 0.31
CTDSP1-207ENST00000473420 MAGEA2P43356 314 aa16.97■□□□□ 0.31
CTDSP1-207ENST00000473420 RPS5P46782 204 aaKnown RBP16.97■□□□□ 0.31
CTDSP1-207ENST00000473420 YAP1P46937 504 aaKnown RBP16.97■□□□□ 0.31
CTDSP1-207ENST00000473420 OR2B6P58173 313 aa16.97■□□□□ 0.31
CTDSP1-207ENST00000473420 H3F3AP84243 136 aa16.97■□□□□ 0.31
CTDSP1-207ENST00000473420 MFSD13AQ14CX5 517 aa16.97■□□□□ 0.31
CTDSP1-207ENST00000473420 TRAM2Q15035 370 aa16.97■□□□□ 0.31
CTDSP1-207ENST00000473420 FAM98BQ52LJ0 330 aaKnown RBP16.97■□□□□ 0.31
CTDSP1-207ENST00000473420 EEF1A1P5Q5VTE0 462 aa16.97■□□□□ 0.31
CTDSP1-207ENST00000473420 PPP4R4Q6NUP7 873 aa16.97■□□□□ 0.31
CTDSP1-207ENST00000473420 XKRXQ6PP77 449 aa16.97■□□□□ 0.31
CTDSP1-207ENST00000473420 PAQR6Q6TCH4 344 aa16.97■□□□□ 0.31
CTDSP1-207ENST00000473420 PIWIL3Q7Z3Z3 882 aaKnown RBP16.97■□□□□ 0.31
CTDSP1-207ENST00000473420 NKAIN4Q8IVV8 208 aa16.97■□□□□ 0.31
CTDSP1-207ENST00000473420 NAXEQ8NCW5 288 aa16.97■□□□□ 0.31
CTDSP1-207ENST00000473420 SSC4DQ8WTU2 575 aa16.97■□□□□ 0.31
CTDSP1-207ENST00000473420 ITLN2Q8WWU7 325 aaPredicted RBP16.97■□□□□ 0.31
CTDSP1-207ENST00000473420 KTI12Q96EK9 354 aaPredicted RBP16.97■□□□□ 0.31
CTDSP1-207ENST00000473420 NAA11Q9BSU3 229 aaPredicted RBP16.97■□□□□ 0.31
CTDSP1-207ENST00000473420 ZNF629Q9UEG4 869 aaPredicted RBP16.97■□□□□ 0.31
CTDSP1-207ENST00000473420 hCG_2039718K7EN88 272 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms