RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 LZICQ8WZA0 190 aa15.21■□□□□ 0.03
VPS52-215ENST00000464425 FAM162AQ96A26 154 aa15.21■□□□□ 0.03
VPS52-215ENST00000464425 ASB9Q96DX5 294 aa15.21■□□□□ 0.03
VPS52-215ENST00000464425 ARL5BQ96KC2 179 aa15.21■□□□□ 0.03
VPS52-215ENST00000464425 CADM1Q9BY67 442 aaKnown RBP15.21■□□□□ 0.03
VPS52-215ENST00000464425 ADAM19Q9H013 955 aa15.21■□□□□ 0.03
VPS52-215ENST00000464425 DCAF13Q9NV06 445 aaKnown RBP15.21■□□□□ 0.03
VPS52-215ENST00000464425 GALNT8Q9NY28 637 aa15.21■□□□□ 0.03
VPS52-215ENST00000464425 ACTR3BQ9P1U1 418 aa15.21■□□□□ 0.03
VPS52-215ENST00000464425 FOXD3Q9UJU5 478 aaPredicted RBP15.21■□□□□ 0.03
VPS52-215ENST00000464425 RPS6KA6Q9UK32 745 aa15.21■□□□□ 0.03
VPS52-215ENST00000464425 EMC9Q9Y3B6 208 aa15.21■□□□□ 0.03
VPS52-215ENST00000464425 SNX13Q9Y5W8 968 aa15.21■□□□□ 0.03
VPS52-215ENST00000464425 NAV2Q8IVL1 2488 aa15.21■□□□□ 0.02
VPS52-215ENST00000464425 MSTNO14793 375 aa15.2■□□□□ 0.02
VPS52-215ENST00000464425 ARPC2O15144 300 aa15.2■□□□□ 0.02
VPS52-215ENST00000464425 SS18L1O75177 396 aaPredicted RBP15.2■□□□□ 0.02
VPS52-215ENST00000464425 CGAP01215 116 aa15.2■□□□□ 0.02
VPS52-215ENST00000464425 CXCR1P25024 350 aa15.2■□□□□ 0.02
VPS52-215ENST00000464425 KIR2DL3P43628 341 aa15.2■□□□□ 0.02
VPS52-215ENST00000464425 NCALDP61601 193 aa15.2■□□□□ 0.02
VPS52-215ENST00000464425 TRAP1Q12931 704 aaKnown RBP15.2■□□□□ 0.02
VPS52-215ENST00000464425 NRF1Q16656 503 aa15.2■□□□□ 0.02
VPS52-215ENST00000464425 ASRGL1Q7L266 308 aa15.2■□□□□ 0.02
VPS52-215ENST00000464425 GDF7Q7Z4P5 450 aa15.2■□□□□ 0.02
VPS52-215ENST00000464425 ZNF610Q8N9Z0 462 aa15.2■□□□□ 0.02
VPS52-215ENST00000464425 RNF128Q8TEB7 428 aa15.2■□□□□ 0.02
VPS52-215ENST00000464425 PROX1Q92786 737 aa15.2■□□□□ 0.02
VPS52-215ENST00000464425 CLPTM1LQ96KA5 538 aa15.2■□□□□ 0.02
VPS52-215ENST00000464425 ARHGDIGQ99819 225 aa15.2■□□□□ 0.02
VPS52-215ENST00000464425 PCDHAC1Q9H158 963 aa15.2■□□□□ 0.02
VPS52-215ENST00000464425 GLRX2Q9NS18 164 aa15.2■□□□□ 0.02
VPS52-215ENST00000464425 PROCRQ9UNN8 238 aa15.2■□□□□ 0.02
VPS52-215ENST00000464425 ITPR2Q14571 2701 aa15.2■□□□□ 0.02
VPS52-215ENST00000464425 ZC3H12DA2A288 527 aaKnown RBP15.19■□□□□ 0.02
VPS52-215ENST00000464425 FMO6PO60774 539 aa15.19■□□□□ 0.02
VPS52-215ENST00000464425 PDE5AO76074 875 aa15.19■□□□□ 0.02
VPS52-215ENST00000464425 PRKD3O94806 890 aa15.19■□□□□ 0.02
VPS52-215ENST00000464425 SERPINA1P01009 418 aa15.19■□□□□ 0.02
VPS52-215ENST00000464425 OR2B6P58173 313 aa15.19■□□□□ 0.02
VPS52-215ENST00000464425 CSNK2A1P68400 391 aaPredicted RBP15.19■□□□□ 0.02
VPS52-215ENST00000464425 RNPS1Q15287 305 aaKnown RBP15.19■□□□□ 0.02
VPS52-215ENST00000464425 ZNF474Q6S9Z5 364 aaPredicted RBP15.19■□□□□ 0.02
VPS52-215ENST00000464425 KIF18BQ86Y91 864 aa15.19■□□□□ 0.02
VPS52-215ENST00000464425 TUSC5Q8IXB3 177 aa15.19■□□□□ 0.02
VPS52-215ENST00000464425 LSMEM1Q8N8F7 131 aa15.19■□□□□ 0.02
VPS52-215ENST00000464425 LINC01560Q8TB33 94 aa15.19■□□□□ 0.02
VPS52-215ENST00000464425 POP5Q969H6 163 aaKnown RBP15.19■□□□□ 0.02
VPS52-215ENST00000464425 MCUR1Q96AQ8 359 aa15.19■□□□□ 0.02
VPS52-215ENST00000464425 DDIT4LQ96D03 193 aa15.19■□□□□ 0.02
VPS52-215ENST00000464425 ZNF559Q9BR84 538 aa15.19■□□□□ 0.02
VPS52-215ENST00000464425 PRR14Q9BWN1 585 aa15.19■□□□□ 0.02
VPS52-215ENST00000464425 C12orf49Q9H741 205 aa15.19■□□□□ 0.02
VPS52-215ENST00000464425 CRIM1Q9NZV1 1036 aa15.19■□□□□ 0.02
VPS52-215ENST00000464425 TESQ9UGI8 421 aaKnown RBP15.19■□□□□ 0.02
VPS52-215ENST00000464425 SAMD4AQ9UPU9 718 aaKnown RBP15.19■□□□□ 0.02
VPS52-215ENST00000464425 SLC9A8Q9Y2E8 581 aa15.19■□□□□ 0.02
VPS52-215ENST00000464425 TUBAL3A6NHL2 446 aa15.18■□□□□ 0.02
VPS52-215ENST00000464425 SMAD9O15198 467 aaKnown RBP15.18■□□□□ 0.02
VPS52-215ENST00000464425 ZNF208O43345 1280 aa15.18■□□□□ 0.02
VPS52-215ENST00000464425 CD8BP10966 210 aa15.18■□□□□ 0.02
VPS52-215ENST00000464425 FKBP2P26885 142 aaKnown RBP15.18■□□□□ 0.02
VPS52-215ENST00000464425 AGTR1P30556 359 aa15.18■□□□□ 0.02
VPS52-215ENST00000464425 SSTR2P30874 369 aa15.18■□□□□ 0.02
VPS52-215ENST00000464425 CLK1P49759 484 aaKnown RBP15.18■□□□□ 0.02
VPS52-215ENST00000464425 RGS8P57771 180 aaPredicted RBP15.18■□□□□ 0.02
VPS52-215ENST00000464425 MS4A2Q01362 244 aa15.18■□□□□ 0.02
VPS52-215ENST00000464425 TLE4Q04727 773 aa15.18■□□□□ 0.02
VPS52-215ENST00000464425 FAM27E3Q08E93 113 aa15.18■□□□□ 0.02
VPS52-215ENST00000464425 EXOC3L2Q2M3D2 409 aa15.18■□□□□ 0.02
VPS52-215ENST00000464425 MTX3Q5HYI7 312 aa15.18■□□□□ 0.02
VPS52-215ENST00000464425 TMEM201Q5SNT2 666 aa15.18■□□□□ 0.02
VPS52-215ENST00000464425 RANBP3LQ86VV4 465 aaPredicted RBP15.18■□□□□ 0.02
VPS52-215ENST00000464425 OR6K3Q8NGY3 331 aa15.18■□□□□ 0.02
VPS52-215ENST00000464425 ZNF775Q96BV0 537 aaPredicted RBP15.18■□□□□ 0.02
VPS52-215ENST00000464425 TPD52L3Q96J77 140 aa15.18■□□□□ 0.02
VPS52-215ENST00000464425 NSMCE2Q96MF7 247 aa15.18■□□□□ 0.02
VPS52-215ENST00000464425 WFDC6Q9BQY6 131 aa15.18■□□□□ 0.02
VPS52-215ENST00000464425 PLSCR4Q9NRQ2 329 aa15.18■□□□□ 0.02
VPS52-215ENST00000464425 KCNN3Q9UGI6 736 aa15.18■□□□□ 0.02
VPS52-215ENST00000464425 SH3GLB1Q9Y371 365 aa15.18■□□□□ 0.02
VPS52-215ENST00000464425 HDGFL3Q9Y3E1 203 aa15.18■□□□□ 0.02
VPS52-215ENST00000464425 MPDZO75970 2070 aa15.18■□□□□ 0.02
VPS52-215ENST00000464425 ABCA12Q86UK0 2595 aa15.18■□□□□ 0.02
VPS52-215ENST00000464425 ACOT8O14734 319 aa15.17■□□□□ 0.02
VPS52-215ENST00000464425 PMS2P2O95744 297 aa15.17■□□□□ 0.02
VPS52-215ENST00000464425 ZNF682O95780 498 aa15.17■□□□□ 0.02
VPS52-215ENST00000464425 HTR2AP28223 471 aa15.17■□□□□ 0.02
VPS52-215ENST00000464425 PEX19P40855 299 aa15.17■□□□□ 0.02
VPS52-215ENST00000464425 MAP2K6P52564 334 aa15.17■□□□□ 0.02
VPS52-215ENST00000464425 RASGEF1BQ0VAM2 473 aa15.17■□□□□ 0.02
VPS52-215ENST00000464425 LCN8Q6JVE9 175 aa15.17■□□□□ 0.02
VPS52-215ENST00000464425 NUFIP2Q7Z417 695 aaKnown RBP15.17■□□□□ 0.02
VPS52-215ENST00000464425 DHFR2Q86XF0 187 aa15.17■□□□□ 0.02
VPS52-215ENST00000464425 SLC43A2Q8N370 569 aa15.17■□□□□ 0.02
VPS52-215ENST00000464425 OR6T1Q8NGN1 323 aa15.17■□□□□ 0.02
VPS52-215ENST00000464425 C3orf49Q96BT1 292 aa15.17■□□□□ 0.02
VPS52-215ENST00000464425 C14orf79Q96F83 325 aa15.17■□□□□ 0.02
VPS52-215ENST00000464425 TRIM2Q9C040 744 aa15.17■□□□□ 0.02
VPS52-215ENST00000464425 SLC24A3Q9HC58 644 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms