RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 SYNGR4O95473 234 aa12.17□□□□□ -0.46
TM9SF4-204ENST00000442842 LDLRP01130 860 aa12.17□□□□□ -0.46
TM9SF4-204ENST00000442842 FCGR1AP12314 374 aa12.17□□□□□ -0.46
TM9SF4-204ENST00000442842 IFI30P13284 250 aa12.17□□□□□ -0.46
TM9SF4-204ENST00000442842 GNLYP22749 145 aa12.17□□□□□ -0.46
TM9SF4-204ENST00000442842 FASP25445 335 aa12.17□□□□□ -0.46
TM9SF4-204ENST00000442842 FKBP2P26885 142 aaKnown RBP12.17□□□□□ -0.46
TM9SF4-204ENST00000442842 IST1P53990 364 aa12.17□□□□□ -0.46
TM9SF4-204ENST00000442842 CASP6P55212 293 aa12.17□□□□□ -0.46
TM9SF4-204ENST00000442842 CARD18P57730 90 aa12.17□□□□□ -0.46
TM9SF4-204ENST00000442842 CSNK2A1P68400 391 aaPredicted RBP12.17□□□□□ -0.46
TM9SF4-204ENST00000442842 LSM11P83369 360 aaKnown RBP eCLIP12.17□□□□□ -0.46
TM9SF4-204ENST00000442842 PON3Q15166 354 aa12.17□□□□□ -0.46
TM9SF4-204ENST00000442842 SEC23BQ15437 767 aa12.17□□□□□ -0.46
TM9SF4-204ENST00000442842 ACSF3Q4G176 576 aaPredicted RBP12.17□□□□□ -0.46
TM9SF4-204ENST00000442842 EMC4Q5J8M3 183 aa12.17□□□□□ -0.46
TM9SF4-204ENST00000442842 C1orf185Q5T7R7 199 aa12.17□□□□□ -0.46
TM9SF4-204ENST00000442842 ZFP1Q6P2D0 407 aa12.17□□□□□ -0.46
TM9SF4-204ENST00000442842 RPTNQ6XPR3 784 aa12.17□□□□□ -0.46
TM9SF4-204ENST00000442842 LINC00114Q6XXX2 140 aa12.17□□□□□ -0.46
TM9SF4-204ENST00000442842 TMPPEQ6ZT21 453 aa12.17□□□□□ -0.46
TM9SF4-204ENST00000442842 MBOAT2Q6ZWT7 520 aa12.17□□□□□ -0.46
TM9SF4-204ENST00000442842 RRM2BQ7LG56 351 aa12.17□□□□□ -0.46
TM9SF4-204ENST00000442842 P4HA3Q7Z4N8 544 aa12.17□□□□□ -0.46
TM9SF4-204ENST00000442842 NRMQ8IXM6 262 aa12.17□□□□□ -0.46
TM9SF4-204ENST00000442842 C10orf67Q8IYJ2 551 aa12.17□□□□□ -0.46
TM9SF4-204ENST00000442842 SLC7A13Q8TCU3 470 aa12.17□□□□□ -0.46
TM9SF4-204ENST00000442842 OSTF1Q92882 214 aa12.17□□□□□ -0.46
TM9SF4-204ENST00000442842 TAAR8Q969N4 342 aa12.17□□□□□ -0.46
TM9SF4-204ENST00000442842 HS6ST2Q96MM7 605 aa12.17□□□□□ -0.46
TM9SF4-204ENST00000442842 ZNF426Q9BUY5 554 aa12.17□□□□□ -0.46
TM9SF4-204ENST00000442842 PTDSS2Q9BVG9 487 aa12.17□□□□□ -0.46
TM9SF4-204ENST00000442842 POTEKPQ9BYX7 375 aa12.17□□□□□ -0.46
TM9SF4-204ENST00000442842 PRRG4Q9BZD6 226 aa12.17□□□□□ -0.46
TM9SF4-204ENST00000442842 SLC19A3Q9BZV2 496 aa12.17□□□□□ -0.46
TM9SF4-204ENST00000442842 ANKRD19PQ9H560 264 aa12.17□□□□□ -0.46
TM9SF4-204ENST00000442842 S100A14Q9HCY8 104 aa12.17□□□□□ -0.46
TM9SF4-204ENST00000442842 MEPEQ9NQ76 525 aaPredicted RBP12.17□□□□□ -0.46
TM9SF4-204ENST00000442842 TIGARQ9NQ88 270 aa12.17□□□□□ -0.46
TM9SF4-204ENST00000442842 C20orf141Q9NUB4 165 aa12.17□□□□□ -0.46
TM9SF4-204ENST00000442842 ATRXP46100 2492 aa12.17□□□□□ -0.46
TM9SF4-204ENST00000442842 NINQ8N4C6 2090 aa12.16□□□□□ -0.46
TM9SF4-204ENST00000442842 SLC22A20A6NK97 555 aa12.16□□□□□ -0.46
TM9SF4-204ENST00000442842 KDM4EB2RXH2 506 aaPredicted RBP12.16□□□□□ -0.46
TM9SF4-204ENST00000442842 PYCARD-AS1I3L0S3 204 aa12.16□□□□□ -0.46
TM9SF4-204ENST00000442842 CLOCKO15516 846 aa12.16□□□□□ -0.46
TM9SF4-204ENST00000442842 OR10H3O60404 316 aa12.16□□□□□ -0.46
TM9SF4-204ENST00000442842 WDR1O75083 606 aa12.16□□□□□ -0.46
TM9SF4-204ENST00000442842 NPIPB7O75200 414 aa12.16□□□□□ -0.46
TM9SF4-204ENST00000442842 DEAF1O75398 565 aaPredicted RBP12.16□□□□□ -0.46
TM9SF4-204ENST00000442842 CCNB2O95067 398 aa12.16□□□□□ -0.46
TM9SF4-204ENST00000442842 PMS2P2O95744 297 aa12.16□□□□□ -0.46
TM9SF4-204ENST00000442842 CH25HO95992 272 aa12.16□□□□□ -0.46
TM9SF4-204ENST00000442842 GABRA1P14867 456 aa12.16□□□□□ -0.46
TM9SF4-204ENST00000442842 KLK2P20151 261 aa12.16□□□□□ -0.46
TM9SF4-204ENST00000442842 FPR1P21462 350 aa12.16□□□□□ -0.46
TM9SF4-204ENST00000442842 ENPP1P22413 925 aa12.16□□□□□ -0.46
TM9SF4-204ENST00000442842 GPR4P46093 362 aa12.16□□□□□ -0.46
TM9SF4-204ENST00000442842 CLK1P49759 484 aaKnown RBP12.16□□□□□ -0.46
TM9SF4-204ENST00000442842 IL1RL1Q01638 556 aa12.16□□□□□ -0.46
TM9SF4-204ENST00000442842 ATP6AP1Q15904 470 aa12.16□□□□□ -0.46
TM9SF4-204ENST00000442842 ZNF239Q16600 458 aaKnown RBP12.16□□□□□ -0.46
TM9SF4-204ENST00000442842 FAM69AQ5T7M9 428 aa12.16□□□□□ -0.46
TM9SF4-204ENST00000442842 C5orf46Q6UWT4 87 aa12.16□□□□□ -0.46
TM9SF4-204ENST00000442842 AMIGO2Q86SJ2 522 aa12.16□□□□□ -0.46
TM9SF4-204ENST00000442842 RPRMLQ8N4K4 120 aa12.16□□□□□ -0.46
TM9SF4-204ENST00000442842 GALNT11Q8NCW6 608 aa12.16□□□□□ -0.46
TM9SF4-204ENST00000442842 OR4K5Q8NGD3 323 aa12.16□□□□□ -0.46
TM9SF4-204ENST00000442842 OR9Q2Q8NGE9 314 aa12.16□□□□□ -0.46
TM9SF4-204ENST00000442842 OR4C15Q8NGM1 316 aa12.16□□□□□ -0.46
TM9SF4-204ENST00000442842 PIGXQ8TBF5 258 aa12.16□□□□□ -0.46
TM9SF4-204ENST00000442842 ROBO4Q8WZ75 1007 aa12.16□□□□□ -0.46
TM9SF4-204ENST00000442842 CPNE4Q96A23 557 aaPredicted RBP12.16□□□□□ -0.46
TM9SF4-204ENST00000442842 ZHX1-C8orf76Q96EF9 292 aa12.16□□□□□ -0.46
TM9SF4-204ENST00000442842 SGTBQ96EQ0 304 aa12.16□□□□□ -0.46
TM9SF4-204ENST00000442842 FAM46AQ96IP4 442 aaKnown RBP12.16□□□□□ -0.46
TM9SF4-204ENST00000442842 KLHL4Q9C0H6 718 aa12.16□□□□□ -0.46
TM9SF4-204ENST00000442842 SEMA6AQ9H2E6 1030 aa12.16□□□□□ -0.46
TM9SF4-204ENST00000442842 TP63Q9H3D4 680 aaPredicted RBP12.16□□□□□ -0.46
TM9SF4-204ENST00000442842 KRCC1Q9NPI7 259 aaPredicted RBP12.16□□□□□ -0.46
TM9SF4-204ENST00000442842 DNAJB9Q9UBS3 223 aa12.16□□□□□ -0.46
TM9SF4-204ENST00000442842 SEC14L4Q9UDX3 406 aa12.16□□□□□ -0.46
TM9SF4-204ENST00000442842 MCTS1Q9ULC4 181 aaKnown RBP12.16□□□□□ -0.46
TM9SF4-204ENST00000442842 ZNF835Q9Y2P0 537 aa12.16□□□□□ -0.46
TM9SF4-204ENST00000442842 TLN1Q9Y490 2541 aaKnown RBP12.16□□□□□ -0.46
TM9SF4-204ENST00000442842 SH3PXD2BA1X283 911 aa12.15□□□□□ -0.46
TM9SF4-204ENST00000442842 LIPT2A6NK58 231 aa12.15□□□□□ -0.46
TM9SF4-204ENST00000442842 OR2T1O43869 369 aa12.15□□□□□ -0.46
TM9SF4-204ENST00000442842 AKR7A3O95154 331 aa12.15□□□□□ -0.46
TM9SF4-204ENST00000442842 BAG2O95816 211 aa12.15□□□□□ -0.46
TM9SF4-204ENST00000442842 BGLAPP02818 100 aa12.15□□□□□ -0.46
TM9SF4-204ENST00000442842 SAGP10523 405 aaPredicted RBP12.15□□□□□ -0.46
TM9SF4-204ENST00000442842 FUT1P19526 365 aa12.15□□□□□ -0.46
TM9SF4-204ENST00000442842 ACVR2AP27037 513 aa12.15□□□□□ -0.46
TM9SF4-204ENST00000442842 GRPRP30550 384 aa12.15□□□□□ -0.46
TM9SF4-204ENST00000442842 NUP107P57740 925 aa12.15□□□□□ -0.46
TM9SF4-204ENST00000442842 SLC35A1P78382 337 aa12.15□□□□□ -0.46
TM9SF4-204ENST00000442842 ELF3P78545 371 aaPredicted RBP12.15□□□□□ -0.46
TM9SF4-204ENST00000442842 ZNF74Q16587 644 aa12.15□□□□□ -0.46
TM9SF4-204ENST00000442842 HMBOX1Q6NT76 420 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms