RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 SLC6A5Q9Y345 797 aa8.38□□□□□ -1.07
HDAC6-209ENST00000440653 UGT2A1Q9Y4X1 527 aa8.38□□□□□ -1.07
HDAC6-209ENST00000440653 PCDHGB2Q9Y5G2 931 aa8.38□□□□□ -1.07
HDAC6-209ENST00000440653 CORINQ9Y5Q5 1042 aa8.38□□□□□ -1.07
HDAC6-209ENST00000440653 CRYBG3Q68DQ2 2970 aa8.38□□□□□ -1.07
HDAC6-209ENST00000440653 A0A087WUJ7 227 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 TRDV1A0A1B0GX56 115 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 A0A1W2PQD3 144 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 ANKRD33BA6NCL7 494 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 TO15178 435 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 IDH3BO43837 385 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 GPX5O75715 221 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 UPK1BO75841 260 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 CER1O95813 267 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 IGKV1D-16P01601 117 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 CLPSP04118 112 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 IGKV3-11P04433 115 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 ADRA2AP08913 450 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 ZGLP1P0C6A0 271 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 CKMT1AP12532 417 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 PEPDP12955 493 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 APEHP13798 732 aaKnown RBP8.37□□□□□ -1.07
HDAC6-209ENST00000440653 MAKP20794 623 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 CSF2RBP32927 897 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 CRYBB2P43320 205 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 CSNK1EP49674 416 aaKnown RBP8.37□□□□□ -1.07
HDAC6-209ENST00000440653 FXYD6P3P58550 94 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 PRPS1P60891 318 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 ACTA2P62736 377 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 ACTG2P63267 376 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 BTG2P78543 158 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 LSM11P83369 360 aaKnown RBP eCLIP8.37□□□□□ -1.07
HDAC6-209ENST00000440653 ACY1Q03154 408 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 LGALS3BPQ08380 585 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 SKP2Q13309 424 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 SQSTM1Q13501 440 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 GGTLC2Q14390 218 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 KLHL26Q53HC5 615 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 FNDC7Q5VTL7 733 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 LIPKQ5VXJ0 399 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 HLA-DQA1Q5Y7H0 255 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 KIRREL2Q6UWL6 708 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 LINC00114Q6XXX2 140 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 TTLL10Q6ZVT0 673 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 MEPCEQ7L2J0 689 aaKnown RBP8.37□□□□□ -1.07
HDAC6-209ENST00000440653 ZAR1Q86SH2 424 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 ZNF554Q86TJ5 538 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 OAFQ86UD1 273 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 ZBTB46Q86UZ6 589 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 ACBD7Q8N6N7 88 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 HAVCR2Q8TDQ0 301 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 NAT6Q93015 286 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 SLC25A46Q96AG3 418 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 KIAA1143Q96AT1 154 aaPredicted RBP8.37□□□□□ -1.07
HDAC6-209ENST00000440653 LCORQ96JN0 433 aaPredicted RBP8.37□□□□□ -1.07
HDAC6-209ENST00000440653 PTCHD1Q96NR3 888 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 PRR14Q9BWN1 585 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 ZNF304Q9HCX3 659 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 C20orf141Q9NUB4 165 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 UCKL1Q9NWZ5 548 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 ERVK13-1Q9NX77 482 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 FLRT3Q9NZU0 649 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 CLEC2DQ9UHP7 191 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 DTX4Q9Y2E6 619 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 ZNF337Q9Y3M9 751 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 PCDHGB6Q9Y5F9 930 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 CLCA3PQ9Y6N3 262 aa8.37□□□□□ -1.07
HDAC6-209ENST00000440653 TLN1Q9Y490 2541 aaKnown RBP8.37□□□□□ -1.07
HDAC6-209ENST00000440653 OTOGQ6ZRI0 2925 aa8.36□□□□□ -1.07
HDAC6-209ENST00000440653 A0A1B0GVT2 93 aa8.36□□□□□ -1.07
HDAC6-209ENST00000440653 ELOA3DA6NLF2 546 aaPredicted RBP8.36□□□□□ -1.07
HDAC6-209ENST00000440653 J3QRE1 110 aa8.36□□□□□ -1.07
HDAC6-209ENST00000440653 K7ENP7 123 aa8.36□□□□□ -1.07
HDAC6-209ENST00000440653 ARPC3O15145 178 aa8.36□□□□□ -1.07
HDAC6-209ENST00000440653 CDC40O60508 579 aaKnown RBP eCLIP8.36□□□□□ -1.07
HDAC6-209ENST00000440653 OR7A10O76100 309 aa8.36□□□□□ -1.07
HDAC6-209ENST00000440653 CH25HO95992 272 aa8.36□□□□□ -1.07
HDAC6-209ENST00000440653 MT-ND5P03915 603 aa8.36□□□□□ -1.07
HDAC6-209ENST00000440653 CTSBP07858 339 aa8.36□□□□□ -1.07
HDAC6-209ENST00000440653 IL12BP29460 328 aa8.36□□□□□ -1.07
HDAC6-209ENST00000440653 NOS3P29474 1203 aa8.36□□□□□ -1.07
HDAC6-209ENST00000440653 OR1D5P58170 312 aa8.36□□□□□ -1.07
HDAC6-209ENST00000440653 RPS4XP62701 263 aaKnown RBP8.36□□□□□ -1.07
HDAC6-209ENST00000440653 HSF2Q03933 536 aa8.36□□□□□ -1.07
HDAC6-209ENST00000440653 CRYZQ08257 329 aaKnown RBP8.36□□□□□ -1.07
HDAC6-209ENST00000440653 ITGADQ13349 1161 aa8.36□□□□□ -1.07
HDAC6-209ENST00000440653 IL10RAQ13651 578 aa8.36□□□□□ -1.07
HDAC6-209ENST00000440653 ATP1A4Q13733 1029 aa8.36□□□□□ -1.07
HDAC6-209ENST00000440653 EBPQ15125 230 aaKnown RBP8.36□□□□□ -1.07
HDAC6-209ENST00000440653 NR0B2Q15466 257 aa8.36□□□□□ -1.07
HDAC6-209ENST00000440653 ELOA3BQ3SY89 546 aa8.36□□□□□ -1.07
HDAC6-209ENST00000440653 SLC35D3Q5M8T2 416 aa8.36□□□□□ -1.07
HDAC6-209ENST00000440653 RHBDD2Q6NTF9 364 aa8.36□□□□□ -1.07
HDAC6-209ENST00000440653 PLBD1Q6P4A8 553 aa8.36□□□□□ -1.07
HDAC6-209ENST00000440653 INO80CQ6PI98 192 aaPredicted RBP8.36□□□□□ -1.07
HDAC6-209ENST00000440653 ZNF322Q6U7Q0 402 aaPredicted RBP8.36□□□□□ -1.07
HDAC6-209ENST00000440653 C5orf46Q6UWT4 87 aa8.36□□□□□ -1.07
HDAC6-209ENST00000440653 DPY19L2P2Q6ZN68 376 aa8.36□□□□□ -1.07
HDAC6-209ENST00000440653 SLC29A4Q7RTT9 530 aa8.36□□□□□ -1.07
HDAC6-209ENST00000440653 BCDIN3DQ7Z5W3 292 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms