RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 OR5M8Q8NGP6 311 aa7.11□□□□□ -1.27
VTI1A-201ENST00000393077 CHTF18Q8WVB6 975 aa7.11□□□□□ -1.27
VTI1A-201ENST00000393077 OIT3Q8WWZ8 545 aa7.11□□□□□ -1.27
VTI1A-201ENST00000393077 SMARCD2Q92925 531 aa7.11□□□□□ -1.27
VTI1A-201ENST00000393077 SCLYQ96I15 445 aa7.11□□□□□ -1.27
VTI1A-201ENST00000393077 ATOH8Q96SQ7 321 aa7.11□□□□□ -1.27
VTI1A-201ENST00000393077 PHB2Q99623 299 aa7.11□□□□□ -1.27
VTI1A-201ENST00000393077 KCNJ15Q99712 375 aa7.11□□□□□ -1.27
VTI1A-201ENST00000393077 FBXO44Q9H4M3 255 aa7.11□□□□□ -1.27
VTI1A-201ENST00000393077 KCMF1Q9P0J7 381 aa7.11□□□□□ -1.27
VTI1A-201ENST00000393077 MARCH2Q9P0N8 246 aa7.11□□□□□ -1.27
VTI1A-201ENST00000393077 GSKIPQ9P0R6 139 aa7.11□□□□□ -1.27
VTI1A-201ENST00000393077 MARCH4Q9P2E8 410 aaPredicted RBP7.11□□□□□ -1.27
VTI1A-201ENST00000393077 CHST2Q9Y4C5 530 aa7.11□□□□□ -1.27
VTI1A-201ENST00000393077 A6NCN8 305 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 F5H5T6 163 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 H7C4K7 107 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 J3KTA2 159 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 EIF1AYO14602 144 aaKnown RBP7.1□□□□□ -1.27
VTI1A-201ENST00000393077 ANXA4P09525 319 aaPredicted RBP7.1□□□□□ -1.27
VTI1A-201ENST00000393077 ZNF865P0CJ78 1059 aaPredicted RBP7.1□□□□□ -1.27
VTI1A-201ENST00000393077 EPXP11678 715 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 ETFAP13804 333 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 MSR1P21757 451 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 FDXRP22570 491 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 FGF9P31371 208 aaPredicted RBP7.1□□□□□ -1.27
VTI1A-201ENST00000393077 PYCR1P32322 319 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 EIF1AXP47813 144 aaKnown RBP7.1□□□□□ -1.27
VTI1A-201ENST00000393077 MVDP53602 400 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 TEAD2Q15562 447 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 RPE65Q16518 533 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 WDR88Q6ZMY6 472 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 NDUFAF7Q7L592 441 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 SCAMP5Q8TAC9 235 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 F2RL3Q96RI0 385 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 SLC35A5Q9BS91 424 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 TAPBPLQ9BX59 468 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 BCO2Q9BYV7 579 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 SLC25A51Q9H1U9 297 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 NSUN3Q9H649 340 aaKnown RBP7.1□□□□□ -1.27
VTI1A-201ENST00000393077 CLMPQ9H6B4 373 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 CA10Q9NS85 328 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 ADAMTSL1Q8N6G6 1762 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 ELOA3CA0A087WX78 387 aaPredicted RBP7.1□□□□□ -1.27
VTI1A-201ENST00000393077 TMEM129A0AVI4 362 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 MATN3O15232 486 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 OR1E1P30953 314 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 GSK3AP49840 483 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 CLDN10P78369 228 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 FNDC3BQ53EP0 1204 aaKnown RBP7.1□□□□□ -1.27
VTI1A-201ENST00000393077 AWAT1Q58HT5 328 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 FAAP20Q6NZ36 180 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 DEGS2Q6QHC5 323 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 CEACAM20Q6UY09 585 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 LIMS2Q7Z4I7 341 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 PPP1R3BQ86XI6 285 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 CLECL1Q8IZS7 167 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 ARRDC1Q8N5I2 433 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 OR4F15Q8NGB8 312 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 OR4K2Q8NGD2 314 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 OR13C4Q8NGS5 318 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 TMEM174Q8WUU8 243 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 FUBP1Q96AE4 644 aaKnown RBP7.1□□□□□ -1.27
VTI1A-201ENST00000393077 KIRREL1Q96J84 757 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 OR1F2PQ96R84 312 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 SEMA3CQ99985 751 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 NAA11Q9BSU3 229 aaPredicted RBP7.1□□□□□ -1.27
VTI1A-201ENST00000393077 CNTNAP3Q9BZ76 1288 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 DPEP2Q9H4A9 486 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 AUNIPQ9H7T9 357 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 POPDC3Q9HBV1 291 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 ASB6Q9NWX5 421 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 OR14J1Q9UGF5 321 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 KCTD3Q9Y597 815 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 MYO7AQ13402 2215 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 MEX3AA1L020 520 aaKnown RBP7.1□□□□□ -1.27
VTI1A-201ENST00000393077 DLEU1O43261 78 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 RDH16O75452 317 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 FGF1P05230 155 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 ERCC1P07992 297 aaPredicted RBP7.1□□□□□ -1.27
VTI1A-201ENST00000393077 MMP2P08253 660 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 TAGLN2P37802 199 aaKnown RBP7.1□□□□□ -1.27
VTI1A-201ENST00000393077 MMP15P51511 669 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 ZNF140P52738 457 aaPredicted RBP7.1□□□□□ -1.27
VTI1A-201ENST00000393077 ARF3P61204 181 aaPredicted RBP7.1□□□□□ -1.27
VTI1A-201ENST00000393077 ARF1P84077 181 aaKnown RBP7.1□□□□□ -1.27
VTI1A-201ENST00000393077 MAPK14Q16539 360 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 PLEKHN1Q494U1 663 aaPredicted RBP7.1□□□□□ -1.27
VTI1A-201ENST00000393077 ACSM3Q53FZ2 586 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 XKR7Q5GH72 579 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 AFMIDQ63HM1 303 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 TRNP1Q6NT89 227 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 C17orf99Q6UX52 265 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 GDPD4Q6W3E5 623 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 LRRC69Q6ZNQ3 347 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 CPEB3Q8NE35 698 aaKnown RBP7.1□□□□□ -1.27
VTI1A-201ENST00000393077 CCDC54Q8NEL0 328 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 OR52I2Q8NH67 350 aa7.1□□□□□ -1.27
VTI1A-201ENST00000393077 THAP3Q8WTV1 239 aaPredicted RBP7.1□□□□□ -1.27
VTI1A-201ENST00000393077 ZBTB8AQ96BR9 441 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms