RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 COQ5Q5HYK3 327 aa13.53□□□□□ -0.24
PRKN-201ENST00000338468 CALHM3Q86XJ0 350 aa13.53□□□□□ -0.24
PRKN-201ENST00000338468 C11orf65Q8NCR3 313 aa13.53□□□□□ -0.24
PRKN-201ENST00000338468 OR10A6Q8NH74 314 aa13.53□□□□□ -0.24
PRKN-201ENST00000338468 NINJ1Q92982 152 aa13.53□□□□□ -0.24
PRKN-201ENST00000338468 LRRC58Q96CX6 371 aa13.53□□□□□ -0.24
PRKN-201ENST00000338468 MED18Q9BUE0 208 aa13.53□□□□□ -0.24
PRKN-201ENST00000338468 SPATA5L1Q9BVQ7 753 aa13.53□□□□□ -0.24
PRKN-201ENST00000338468 PLEKHF2Q9H8W4 249 aa13.53□□□□□ -0.24
PRKN-201ENST00000338468 MRGBPQ9NV56 204 aa13.53□□□□□ -0.24
PRKN-201ENST00000338468 C6orf203Q9P0P8 240 aaPredicted RBP13.53□□□□□ -0.24
PRKN-201ENST00000338468 ARMCX1Q9P291 453 aa13.53□□□□□ -0.24
PRKN-201ENST00000338468 PRSS50Q9UI38 385 aa13.53□□□□□ -0.24
PRKN-201ENST00000338468 ACANP16112 2415 aa13.53□□□□□ -0.24
PRKN-201ENST00000338468 FBN3Q75N90 2809 aa13.53□□□□□ -0.24
PRKN-201ENST00000338468 LOC100653049A0A140TA62 436 aa13.52□□□□□ -0.25
PRKN-201ENST00000338468 LIPT2A6NK58 231 aa13.52□□□□□ -0.25
PRKN-201ENST00000338468 MRASO14807 208 aa13.52□□□□□ -0.25
PRKN-201ENST00000338468 KRT34O76011 436 aa13.52□□□□□ -0.25
PRKN-201ENST00000338468 GOSR1O95249 250 aa13.52□□□□□ -0.25
PRKN-201ENST00000338468 LOXP28300 417 aaPredicted RBP13.52□□□□□ -0.25
PRKN-201ENST00000338468 ADSLP30566 484 aaPredicted RBP13.52□□□□□ -0.25
PRKN-201ENST00000338468 PCGF2P35227 344 aa13.52□□□□□ -0.25
PRKN-201ENST00000338468 CRYBA2P53672 197 aa13.52□□□□□ -0.25
PRKN-201ENST00000338468 SLC35A1P78382 337 aa13.52□□□□□ -0.25
PRKN-201ENST00000338468 EGR4Q05215 589 aa13.52□□□□□ -0.25
PRKN-201ENST00000338468 CEACAM7Q14002 265 aa13.52□□□□□ -0.25
PRKN-201ENST00000338468 TSC22D1Q15714 1073 aa13.52□□□□□ -0.25
PRKN-201ENST00000338468 C6orf89Q6UWU4 347 aa13.52□□□□□ -0.25
PRKN-201ENST00000338468 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.52□□□□□ -0.25
PRKN-201ENST00000338468 STK32CQ86UX6 486 aa13.52□□□□□ -0.25
PRKN-201ENST00000338468 CXorf67Q86X51 503 aaPredicted RBP13.52□□□□□ -0.25
PRKN-201ENST00000338468 ARMC8Q8IUR7 673 aa13.52□□□□□ -0.25
PRKN-201ENST00000338468 LSMEM1Q8N8F7 131 aa13.52□□□□□ -0.25
PRKN-201ENST00000338468 GPR32P1Q8NGA4 272 aa13.52□□□□□ -0.25
PRKN-201ENST00000338468 ZHX1-C8orf76Q96EF9 292 aa13.52□□□□□ -0.25
PRKN-201ENST00000338468 ZNF607Q96SK3 696 aa13.52□□□□□ -0.25
PRKN-201ENST00000338468 ANGPT4Q9Y264 503 aa13.52□□□□□ -0.25
PRKN-201ENST00000338468 GPR52Q9Y2T5 361 aa13.52□□□□□ -0.25
PRKN-201ENST00000338468 ZNF469Q96JG9 3925 aaPredicted RBP13.52□□□□□ -0.25
PRKN-201ENST00000338468 PRR14LQ5THK1 2151 aa13.52□□□□□ -0.25
PRKN-201ENST00000338468 A0A1B0GWA3 101 aa13.51□□□□□ -0.25
PRKN-201ENST00000338468 PRORSD1PA6NEY8 169 aa13.51□□□□□ -0.25
PRKN-201ENST00000338468 BBIP1A8MTZ0 92 aa13.51□□□□□ -0.25
PRKN-201ENST00000338468 A8MVM7 634 aa13.51□□□□□ -0.25
PRKN-201ENST00000338468 M0QX08 132 aa13.51□□□□□ -0.25
PRKN-201ENST00000338468 SLC22A2O15244 555 aa13.51□□□□□ -0.25
PRKN-201ENST00000338468 OPN1SWP03999 348 aa13.51□□□□□ -0.25
PRKN-201ENST00000338468 IDUAP35475 653 aa13.51□□□□□ -0.25
PRKN-201ENST00000338468 P2RY4P51582 365 aa13.51□□□□□ -0.25
PRKN-201ENST00000338468 SEC24CP53992 1094 aa13.51□□□□□ -0.25
PRKN-201ENST00000338468 CYLC2Q14093 348 aaPredicted RBP13.51□□□□□ -0.25
PRKN-201ENST00000338468 DUSP7Q16829 419 aa13.51□□□□□ -0.25
PRKN-201ENST00000338468 C1orf140Q5VVS0 124 aa13.51□□□□□ -0.25
PRKN-201ENST00000338468 PAQR6Q6TCH4 344 aa13.51□□□□□ -0.25
PRKN-201ENST00000338468 GALNT5Q7Z7M9 940 aa13.51□□□□□ -0.25
PRKN-201ENST00000338468 TMEM99Q8N816 258 aa13.51□□□□□ -0.25
PRKN-201ENST00000338468 SMYD1Q8NB12 490 aa13.51□□□□□ -0.25
PRKN-201ENST00000338468 OR8J3Q8NGG0 315 aa13.51□□□□□ -0.25
PRKN-201ENST00000338468 PIGXQ8TBF5 258 aa13.51□□□□□ -0.25
PRKN-201ENST00000338468 ZC3HAV1LQ96H79 300 aaKnown RBP13.51□□□□□ -0.25
PRKN-201ENST00000338468 PTDSS2Q9BVG9 487 aa13.51□□□□□ -0.25
PRKN-201ENST00000338468 ACTR6Q9GZN1 396 aa13.51□□□□□ -0.25
PRKN-201ENST00000338468 PIF1Q9H611 641 aa13.51□□□□□ -0.25
PRKN-201ENST00000338468 CCM2LQ9NUG4 571 aaPredicted RBP13.51□□□□□ -0.25
PRKN-201ENST00000338468 USP22Q9UPT9 525 aa13.51□□□□□ -0.25
PRKN-201ENST00000338468 CAPN7Q9Y6W3 813 aa13.51□□□□□ -0.25
PRKN-201ENST00000338468 PRRC2AP48634 2157 aaKnown RBP13.5□□□□□ -0.25
PRKN-201ENST00000338468 IGKV1D-42A0A075B6H8 117 aa13.5□□□□□ -0.25
PRKN-201ENST00000338468 FTCDNL1E5RQL4 147 aa13.5□□□□□ -0.25
PRKN-201ENST00000338468 CASKO14936 926 aa13.5□□□□□ -0.25
PRKN-201ENST00000338468 KLF4O43474 513 aa13.5□□□□□ -0.25
PRKN-201ENST00000338468 EIF1BO60739 113 aaKnown RBP13.5□□□□□ -0.25
PRKN-201ENST00000338468 SERPINB7O75635 380 aa13.5□□□□□ -0.25
PRKN-201ENST00000338468 AKR7A3O95154 331 aa13.5□□□□□ -0.25
PRKN-201ENST00000338468 LGI1O95970 557 aa13.5□□□□□ -0.25
PRKN-201ENST00000338468 ADAP00813 363 aa13.5□□□□□ -0.25
PRKN-201ENST00000338468 NPPAP01160 153 aa13.5□□□□□ -0.25
PRKN-201ENST00000338468 CD247P20963 164 aa13.5□□□□□ -0.25
PRKN-201ENST00000338468 SLC17A1Q14916 467 aa13.5□□□□□ -0.25
PRKN-201ENST00000338468 MAPRE2Q15555 327 aa13.5□□□□□ -0.25
PRKN-201ENST00000338468 OR7A5Q15622 319 aa13.5□□□□□ -0.25
PRKN-201ENST00000338468 NPTX1Q15818 432 aa13.5□□□□□ -0.25
PRKN-201ENST00000338468 VMACQ2NL98 169 aa13.5□□□□□ -0.25
PRKN-201ENST00000338468 MMEL1Q495T6 779 aa13.5□□□□□ -0.25
PRKN-201ENST00000338468 SFRP5Q5T4F7 317 aa13.5□□□□□ -0.25
PRKN-201ENST00000338468 Q6ZT83 130 aa13.5□□□□□ -0.25
PRKN-201ENST00000338468 TREML1Q86YW5 311 aa13.5□□□□□ -0.25
PRKN-201ENST00000338468 POU5F2Q8N7G0 328 aa13.5□□□□□ -0.25
PRKN-201ENST00000338468 OR4D11Q8NGI4 311 aa13.5□□□□□ -0.25
PRKN-201ENST00000338468 STK35Q8TDR2 534 aa13.5□□□□□ -0.25
PRKN-201ENST00000338468 S100PBPQ96BU1 408 aa13.5□□□□□ -0.25
PRKN-201ENST00000338468 TAMM41Q96BW9 452 aa13.5□□□□□ -0.25
PRKN-201ENST00000338468 ZNF583Q96ND8 569 aa13.5□□□□□ -0.25
PRKN-201ENST00000338468 HS3ST6Q96QI5 342 aa13.5□□□□□ -0.25
PRKN-201ENST00000338468 ARHGDIGQ99819 225 aa13.5□□□□□ -0.25
PRKN-201ENST00000338468 OR10A4Q9H209 315 aa13.5□□□□□ -0.25
PRKN-201ENST00000338468 C12orf10Q9HB07 376 aa13.5□□□□□ -0.25
PRKN-201ENST00000338468 ZNF226Q9NYT6 803 aa13.5□□□□□ -0.25
PRKN-201ENST00000338468 EMC3Q9P0I2 261 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms