RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 MFRPQ9BY79 579 aa12.38□□□□□ -0.43
SKA3-202ENST00000314759 ADAP2Q9NPF8 381 aa12.38□□□□□ -0.43
SKA3-202ENST00000314759 NRIP3Q9NQ35 241 aa12.38□□□□□ -0.43
SKA3-202ENST00000314759 PRSS16Q9NQE7 514 aa12.38□□□□□ -0.43
SKA3-202ENST00000314759 SCN2AQ99250 2005 aa12.38□□□□□ -0.43
SKA3-202ENST00000314759 MTRF1O75570 445 aaKnown RBP12.38□□□□□ -0.43
SKA3-202ENST00000314759 PAK4O96013 591 aaPredicted RBP12.38□□□□□ -0.43
SKA3-202ENST00000314759 CSF2RAP15509 400 aa12.38□□□□□ -0.43
SKA3-202ENST00000314759 TYRP1P17643 537 aa12.38□□□□□ -0.43
SKA3-202ENST00000314759 TNFRSF17Q02223 184 aa12.38□□□□□ -0.43
SKA3-202ENST00000314759 ID2Q02363 134 aa12.38□□□□□ -0.43
SKA3-202ENST00000314759 FHL1Q13642 323 aa12.38□□□□□ -0.43
SKA3-202ENST00000314759 OR5M10Q6IEU7 315 aa12.38□□□□□ -0.43
SKA3-202ENST00000314759 NHLRC1Q6VVB1 395 aa12.38□□□□□ -0.43
SKA3-202ENST00000314759 LINC00518Q8N0U6 118 aa12.38□□□□□ -0.43
SKA3-202ENST00000314759 SHISA5Q8N114 240 aa12.38□□□□□ -0.43
SKA3-202ENST00000314759 GFI1Q99684 422 aa12.38□□□□□ -0.43
SKA3-202ENST00000314759 TMEM74BQ9NUR3 256 aa12.38□□□□□ -0.43
SKA3-202ENST00000314759 KLK11Q9UBX7 282 aa12.38□□□□□ -0.43
SKA3-202ENST00000314759 ING1Q9UK53 422 aaPredicted RBP12.38□□□□□ -0.43
SKA3-202ENST00000314759 TRBV2A0A0J9YWF9 115 aa12.37□□□□□ -0.43
SKA3-202ENST00000314759 ACRP10323 421 aa12.37□□□□□ -0.43
SKA3-202ENST00000314759 EPCAMP16422 314 aa12.37□□□□□ -0.43
SKA3-202ENST00000314759 ITGB8P26012 769 aa12.37□□□□□ -0.43
SKA3-202ENST00000314759 CMPK1P30085 196 aa12.37□□□□□ -0.43
SKA3-202ENST00000314759 MAT2AP31153 395 aaKnown RBP12.37□□□□□ -0.43
SKA3-202ENST00000314759 POU4F2Q12837 409 aa12.37□□□□□ -0.43
SKA3-202ENST00000314759 IRF4Q15306 451 aa12.37□□□□□ -0.43
SKA3-202ENST00000314759 HES5Q5TA89 166 aa12.37□□□□□ -0.43
SKA3-202ENST00000314759 FAAP20Q6NZ36 180 aa12.37□□□□□ -0.43
SKA3-202ENST00000314759 FIGNL1Q6PIW4 674 aa12.37□□□□□ -0.43
SKA3-202ENST00000314759 C17orf107Q6ZR85 190 aa12.37□□□□□ -0.43
SKA3-202ENST00000314759 UBE2Q1Q7Z7E8 422 aa12.37□□□□□ -0.43
SKA3-202ENST00000314759 SERPINA12Q8IW75 414 aa12.37□□□□□ -0.43
SKA3-202ENST00000314759 SUSD6Q92537 303 aa12.37□□□□□ -0.43
SKA3-202ENST00000314759 GAL3ST3Q96A11 431 aa12.37□□□□□ -0.43
SKA3-202ENST00000314759 LDAHQ9H6V9 325 aa12.37□□□□□ -0.43
SKA3-202ENST00000314759 PLEKHA1Q9HB21 404 aa12.37□□□□□ -0.43
SKA3-202ENST00000314759 LTBP2Q14767 1821 aa12.37□□□□□ -0.43
SKA3-202ENST00000314759 A0A1B0GUH1 482 aa12.37□□□□□ -0.43
SKA3-202ENST00000314759 TUBAL3A6NHL2 446 aa12.37□□□□□ -0.43
SKA3-202ENST00000314759 ANXA2P2A6NMY6 339 aa12.37□□□□□ -0.43
SKA3-202ENST00000314759 MCRIP1C9JLW8 97 aa12.37□□□□□ -0.43
SKA3-202ENST00000314759 ARPC1BO15143 372 aaKnown RBP12.37□□□□□ -0.43
SKA3-202ENST00000314759 PIN1P1O15428 100 aa12.37□□□□□ -0.43
SKA3-202ENST00000314759 PRAF2O60831 178 aa12.37□□□□□ -0.43
SKA3-202ENST00000314759 SRMP19623 302 aa12.37□□□□□ -0.43
SKA3-202ENST00000314759 NAA10P41227 235 aaPredicted RBP12.37□□□□□ -0.43
SKA3-202ENST00000314759 NOGQ13253 232 aa12.37□□□□□ -0.43
SKA3-202ENST00000314759 HTR4Q13639 388 aa12.37□□□□□ -0.43
SKA3-202ENST00000314759 FGL2Q14314 439 aa12.37□□□□□ -0.43
SKA3-202ENST00000314759 MELKQ14680 651 aa12.37□□□□□ -0.43
SKA3-202ENST00000314759 METTL11BQ5VVY1 283 aa12.37□□□□□ -0.43
SKA3-202ENST00000314759 SHEQ5VZ18 495 aa12.37□□□□□ -0.43
SKA3-202ENST00000314759 SLC25A25Q6KCM7 469 aa12.37□□□□□ -0.43
SKA3-202ENST00000314759 APOOLQ6UXV4 268 aa12.37□□□□□ -0.43
SKA3-202ENST00000314759 FAM71CQ8NEG0 241 aa12.37□□□□□ -0.43
SKA3-202ENST00000314759 SDR9C7Q8NEX9 313 aa12.37□□□□□ -0.43
SKA3-202ENST00000314759 OR52E2Q8NGJ4 325 aa12.37□□□□□ -0.43
SKA3-202ENST00000314759 SLC25A38Q96DW6 304 aa12.37□□□□□ -0.43
SKA3-202ENST00000314759 LCORQ96JN0 433 aaPredicted RBP12.37□□□□□ -0.43
SKA3-202ENST00000314759 IL21RQ9HBE5 538 aa12.37□□□□□ -0.43
SKA3-202ENST00000314759 NOX4Q9NPH5 578 aa12.37□□□□□ -0.43
SKA3-202ENST00000314759 SESN1Q9Y6P5 492 aa12.37□□□□□ -0.43
SKA3-202ENST00000314759 DENND4AQ7Z401 1863 aa12.37□□□□□ -0.43
SKA3-202ENST00000314759 MUC22E2RYF6 1773 aaPredicted RBP12.36□□□□□ -0.43
SKA3-202ENST00000314759 GPR89AB7ZAQ6 455 aa12.36□□□□□ -0.43
SKA3-202ENST00000314759 PDCD5O14737 125 aa12.36□□□□□ -0.43
SKA3-202ENST00000314759 ZNF749O43361 778 aa12.36□□□□□ -0.43
SKA3-202ENST00000314759 FMO6PO60774 539 aa12.36□□□□□ -0.43
SKA3-202ENST00000314759 NGFRP08138 427 aa12.36□□□□□ -0.43
SKA3-202ENST00000314759 GPR89BP0CG08 455 aa12.36□□□□□ -0.43
SKA3-202ENST00000314759 NFYAP23511 347 aaPredicted RBP12.36□□□□□ -0.43
SKA3-202ENST00000314759 HLXQ14774 488 aaPredicted RBP12.36□□□□□ -0.43
SKA3-202ENST00000314759 SYS1Q8N2H4 156 aa12.36□□□□□ -0.43
SKA3-202ENST00000314759 OR4K13Q8NH42 304 aa12.36□□□□□ -0.43
SKA3-202ENST00000314759 TOX2Q96NM4 488 aa12.36□□□□□ -0.43
SKA3-202ENST00000314759 CD93Q9NPY3 652 aa12.36□□□□□ -0.43
SKA3-202ENST00000314759 POT1Q9NUX5 634 aa12.36□□□□□ -0.43
SKA3-202ENST00000314759 GPR160Q9UJ42 338 aa12.36□□□□□ -0.43
SKA3-202ENST00000314759 GNG8Q9UK08 70 aa12.36□□□□□ -0.43
SKA3-202ENST00000314759 BAIAP2Q9UQB8 552 aa12.36□□□□□ -0.43
SKA3-202ENST00000314759 CHURC1-FNTBB4DL54 471 aa12.36□□□□□ -0.43
SKA3-202ENST00000314759 KRBOX1C9JBD0 128 aa12.36□□□□□ -0.43
SKA3-202ENST00000314759 OR2T7P0C7T2 308 aa12.36□□□□□ -0.43
SKA3-202ENST00000314759 CPMP14384 443 aa12.36□□□□□ -0.43
SKA3-202ENST00000314759 ANXA7P20073 488 aaKnown RBP12.36□□□□□ -0.43
SKA3-202ENST00000314759 PSMB10P40306 273 aa12.36□□□□□ -0.43
SKA3-202ENST00000314759 MAGEB1P43366 347 aa12.36□□□□□ -0.43
SKA3-202ENST00000314759 RUNX2Q13950 521 aa12.36□□□□□ -0.43
SKA3-202ENST00000314759 DEFB134Q4QY38 66 aa12.36□□□□□ -0.43
SKA3-202ENST00000314759 FHL5Q5TD97 284 aa12.36□□□□□ -0.43
SKA3-202ENST00000314759 STPG1Q5TH74 334 aa12.36□□□□□ -0.43
SKA3-202ENST00000314759 AGBL4Q5VU57 503 aa12.36□□□□□ -0.43
SKA3-202ENST00000314759 OR2T27Q8NH04 317 aa12.36□□□□□ -0.43
SKA3-202ENST00000314759 SNX33Q8WV41 574 aa12.36□□□□□ -0.43
SKA3-202ENST00000314759 CMTM3Q96MX0 182 aa12.36□□□□□ -0.43
SKA3-202ENST00000314759 TIMM29Q9BSF4 260 aa12.36□□□□□ -0.43
SKA3-202ENST00000314759 SLC25A18Q9H1K4 315 aa12.36□□□□□ -0.43
SKA3-202ENST00000314759 FLRT3Q9NZU0 649 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms