RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 ASCL1P50553 236 aa16.34■□□□□ 0.21
LITAF-220ENST00000620789 MNAT1P51948 309 aa16.34■□□□□ 0.21
LITAF-220ENST00000620789 LRRC23Q53EV4 343 aaPredicted RBP16.34■□□□□ 0.21
LITAF-220ENST00000620789 SP5Q6BEB4 398 aaPredicted RBP16.34■□□□□ 0.21
LITAF-220ENST00000620789 HIST2H2BCQ6DN03 193 aa16.34■□□□□ 0.21
LITAF-220ENST00000620789 GTF2IRD2BQ6EKJ0 949 aa16.34■□□□□ 0.21
LITAF-220ENST00000620789 C6orf89Q6UWU4 347 aa16.34■□□□□ 0.21
LITAF-220ENST00000620789 FCRLAQ7L513 359 aa16.34■□□□□ 0.21
LITAF-220ENST00000620789 FAM214BQ7L5A3 538 aa16.34■□□□□ 0.21
LITAF-220ENST00000620789 GTF2IRD2Q86UP8 949 aa16.34■□□□□ 0.21
LITAF-220ENST00000620789 LSRQ86X29 649 aaPredicted RBP16.34■□□□□ 0.21
LITAF-220ENST00000620789 PGAM4Q8N0Y7 254 aa16.34■□□□□ 0.21
LITAF-220ENST00000620789 CNEP1R1Q8N9A8 125 aa16.34■□□□□ 0.21
LITAF-220ENST00000620789 DNAJA3Q96EY1 480 aa16.34■□□□□ 0.21
LITAF-220ENST00000620789 KCTD14Q9BQ13 255 aaPredicted RBP16.34■□□□□ 0.21
LITAF-220ENST00000620789 PIGMQ9H3S5 423 aa16.34■□□□□ 0.21
LITAF-220ENST00000620789 C12orf10Q9HB07 376 aa16.34■□□□□ 0.21
LITAF-220ENST00000620789 TMEM27Q9HBJ8 222 aa16.34■□□□□ 0.21
LITAF-220ENST00000620789 GLRX2Q9NS18 164 aa16.34■□□□□ 0.21
LITAF-220ENST00000620789 JKAMPQ9P055 326 aa16.34■□□□□ 0.21
LITAF-220ENST00000620789 PACSIN3Q9UKS6 424 aa16.34■□□□□ 0.21
LITAF-220ENST00000620789 BAG5Q9UL15 447 aa16.34■□□□□ 0.21
LITAF-220ENST00000620789 TRAPPC4Q9Y296 219 aa16.34■□□□□ 0.21
LITAF-220ENST00000620789 IGHV3-15A0A0B4J1V0 119 aa16.33■□□□□ 0.2
LITAF-220ENST00000620789 ZC3H12DA2A288 527 aaKnown RBP16.33■□□□□ 0.2
LITAF-220ENST00000620789 A8MVM7 634 aa16.33■□□□□ 0.2
LITAF-220ENST00000620789 TMEM229AB2RXF0 380 aa16.33■□□□□ 0.2
LITAF-220ENST00000620789 EEF1E1-BLOC1S5C9J1V9 151 aa16.33■□□□□ 0.2
LITAF-220ENST00000620789 CXCR6O00574 342 aa16.33■□□□□ 0.2
LITAF-220ENST00000620789 SMAD9O15198 467 aaKnown RBP16.33■□□□□ 0.2
LITAF-220ENST00000620789 GSTA4O15217 222 aa16.33■□□□□ 0.2
LITAF-220ENST00000620789 EEF1E1O43324 174 aaKnown RBP16.33■□□□□ 0.2
LITAF-220ENST00000620789 DNPH1O43598 174 aa16.33■□□□□ 0.2
LITAF-220ENST00000620789 FMO6PO60774 539 aa16.33■□□□□ 0.2
LITAF-220ENST00000620789 SIRPAP78324 504 aa16.33■□□□□ 0.2
LITAF-220ENST00000620789 SLC25A3Q00325 362 aa16.33■□□□□ 0.2
LITAF-220ENST00000620789 BNIP2Q12982 314 aa16.33■□□□□ 0.2
LITAF-220ENST00000620789 RNPS1Q15287 305 aaKnown RBP16.33■□□□□ 0.2
LITAF-220ENST00000620789 OR1Q1Q15612 314 aa16.33■□□□□ 0.2
LITAF-220ENST00000620789 NPTX1Q15818 432 aa16.33■□□□□ 0.2
LITAF-220ENST00000620789 FBXL19-AS1Q494R0 122 aa16.33■□□□□ 0.2
LITAF-220ENST00000620789 CYBRD1Q53TN4 286 aa16.33■□□□□ 0.2
LITAF-220ENST00000620789 VWA1Q6PCB0 445 aa16.33■□□□□ 0.2
LITAF-220ENST00000620789 ULK3Q6PHR2 472 aa16.33■□□□□ 0.2
LITAF-220ENST00000620789 MCEMP1Q8IX19 187 aa16.33■□□□□ 0.2
LITAF-220ENST00000620789 SLC43A2Q8N370 569 aa16.33■□□□□ 0.2
LITAF-220ENST00000620789 OR4D11Q8NGI4 311 aa16.33■□□□□ 0.2
LITAF-220ENST00000620789 OR6T1Q8NGN1 323 aa16.33■□□□□ 0.2
LITAF-220ENST00000620789 VANGL1Q8TAA9 524 aaPredicted RBP16.33■□□□□ 0.2
LITAF-220ENST00000620789 ABHD3Q8WU67 409 aa16.33■□□□□ 0.2
LITAF-220ENST00000620789 DNAJA4Q8WW22 397 aaPredicted RBP16.33■□□□□ 0.2
LITAF-220ENST00000620789 PROX1Q92786 737 aa16.33■□□□□ 0.2
LITAF-220ENST00000620789 STARD4Q96DR4 205 aa16.33■□□□□ 0.2
LITAF-220ENST00000620789 POTEKPQ9BYX7 375 aa16.33■□□□□ 0.2
LITAF-220ENST00000620789 NPDC1Q9NQX5 325 aaPredicted RBP16.33■□□□□ 0.2
LITAF-220ENST00000620789 NDE1Q9NXR1 346 aa16.33■□□□□ 0.2
LITAF-220ENST00000620789 ADA2Q9NZK5 511 aa16.33■□□□□ 0.2
LITAF-220ENST00000620789 CLEC4AQ9UMR7 237 aa16.33■□□□□ 0.2
LITAF-220ENST00000620789 EMC9Q9Y3B6 208 aa16.33■□□□□ 0.2
LITAF-220ENST00000620789 HCFC1P51610 2035 aa16.33■□□□□ 0.2
LITAF-220ENST00000620789 A0A0B4J2E0 115 aa16.32■□□□□ 0.2
LITAF-220ENST00000620789 A0A1B0GX12 115 aa16.32■□□□□ 0.2
LITAF-220ENST00000620789 ELOA3DA6NLF2 546 aaPredicted RBP16.32■□□□□ 0.2
LITAF-220ENST00000620789 PRKD3O94806 890 aa16.32■□□□□ 0.2
LITAF-220ENST00000620789 PNMTP11086 282 aa16.32■□□□□ 0.2
LITAF-220ENST00000620789 IMPDH2P12268 514 aa16.32■□□□□ 0.2
LITAF-220ENST00000620789 IDUAP35475 653 aa16.32■□□□□ 0.2
LITAF-220ENST00000620789 MXRA7P84157 204 aa16.32■□□□□ 0.2
LITAF-220ENST00000620789 ELOA3BQ3SY89 546 aa16.32■□□□□ 0.2
LITAF-220ENST00000620789 ALG10BQ5I7T1 473 aa16.32■□□□□ 0.2
LITAF-220ENST00000620789 C16orf89Q6UX73 402 aa16.32■□□□□ 0.2
LITAF-220ENST00000620789 RBM45Q8IUH3 476 aaKnown RBP16.32■□□□□ 0.2
LITAF-220ENST00000620789 ELOA3Q8NG57 546 aa16.32■□□□□ 0.2
LITAF-220ENST00000620789 ZHX1-C8orf76Q96EF9 292 aa16.32■□□□□ 0.2
LITAF-220ENST00000620789 SLC47A1Q96FL8 570 aa16.32■□□□□ 0.2
LITAF-220ENST00000620789 LRRC46Q96FV0 321 aa16.32■□□□□ 0.2
LITAF-220ENST00000620789 NSL1Q96IY1 281 aa16.32■□□□□ 0.2
LITAF-220ENST00000620789 MCHR1Q99705 422 aa16.32■□□□□ 0.2
LITAF-220ENST00000620789 GP6Q9HCN6 339 aa16.32■□□□□ 0.2
LITAF-220ENST00000620789 SLC9A8Q9Y2E8 581 aa16.32■□□□□ 0.2
LITAF-220ENST00000620789 SH3GLB1Q9Y371 365 aa16.32■□□□□ 0.2
LITAF-220ENST00000620789 CYTIPO60759 359 aa16.31■□□□□ 0.2
LITAF-220ENST00000620789 NPIPB7O75200 414 aa16.31■□□□□ 0.2
LITAF-220ENST00000620789 IGFBP2P18065 325 aa16.31■□□□□ 0.2
LITAF-220ENST00000620789 KLK2P20151 261 aa16.31■□□□□ 0.2
LITAF-220ENST00000620789 CTBP2P56545 445 aa16.31■□□□□ 0.2
LITAF-220ENST00000620789 OR2B6P58173 313 aa16.31■□□□□ 0.2
LITAF-220ENST00000620789 SWT1Q5T5J6 900 aaKnown RBP16.31■□□□□ 0.2
LITAF-220ENST00000620789 C1orf140Q5VVS0 124 aa16.31■□□□□ 0.2
LITAF-220ENST00000620789 ZNF613Q6PF04 617 aa16.31■□□□□ 0.2
LITAF-220ENST00000620789 BTLAQ7Z6A9 289 aa16.31■□□□□ 0.2
LITAF-220ENST00000620789 LUZP2Q86TE4 346 aa16.31■□□□□ 0.2
LITAF-220ENST00000620789 CARM1Q86X55 608 aa16.31■□□□□ 0.2
LITAF-220ENST00000620789 ACBD4Q8NC06 268 aa16.31■□□□□ 0.2
LITAF-220ENST00000620789 OR6K3Q8NGY3 331 aa16.31■□□□□ 0.2
LITAF-220ENST00000620789 STK35Q8TDR2 534 aa16.31■□□□□ 0.2
LITAF-220ENST00000620789 SLC38A4Q969I6 547 aa16.31■□□□□ 0.2
LITAF-220ENST00000620789 ENKD1Q9H0I2 346 aa16.31■□□□□ 0.2
LITAF-220ENST00000620789 PCDHAC1Q9H158 963 aa16.31■□□□□ 0.2
LITAF-220ENST00000620789 SELENONQ9NZV5 590 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms