RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 CCDC106Q9BWC9 280 aa14.04□□□□□ -0.16
RNF40-205ENST00000563909 PAIP1Q9H074 479 aaKnown RBP14.04□□□□□ -0.16
RNF40-205ENST00000563909 MYLK2Q9H1R3 596 aa14.04□□□□□ -0.16
RNF40-205ENST00000563909 PIGUQ9H490 435 aa14.04□□□□□ -0.16
RNF40-205ENST00000563909 ARMCX1Q9P291 453 aa14.04□□□□□ -0.16
RNF40-205ENST00000563909 BBIP1A8MTZ0 92 aa14.03□□□□□ -0.16
RNF40-205ENST00000563909 SYNGR4O95473 234 aa14.03□□□□□ -0.16
RNF40-205ENST00000563909 ADAP00813 363 aa14.03□□□□□ -0.16
RNF40-205ENST00000563909 ACP2P11117 423 aa14.03□□□□□ -0.16
RNF40-205ENST00000563909 ANXA11P50995 505 aaKnown RBP14.03□□□□□ -0.16
RNF40-205ENST00000563909 PSMD4P55036 377 aaKnown RBP14.03□□□□□ -0.16
RNF40-205ENST00000563909 STX5Q13190 355 aa14.03□□□□□ -0.16
RNF40-205ENST00000563909 CYLC2Q14093 348 aaPredicted RBP14.03□□□□□ -0.16
RNF40-205ENST00000563909 DECR1Q16698 335 aa14.03□□□□□ -0.16
RNF40-205ENST00000563909 MMEL1Q495T6 779 aa14.03□□□□□ -0.16
RNF40-205ENST00000563909 IQCCQ4KMZ1 466 aa14.03□□□□□ -0.16
RNF40-205ENST00000563909 COQ5Q5HYK3 327 aa14.03□□□□□ -0.16
RNF40-205ENST00000563909 EXOSC6Q5RKV6 272 aaKnown RBP14.03□□□□□ -0.16
RNF40-205ENST00000563909 LRIF1Q5T3J3 769 aa14.03□□□□□ -0.16
RNF40-205ENST00000563909 PIAS4Q8N2W9 510 aaPredicted RBP14.03□□□□□ -0.16
RNF40-205ENST00000563909 DPP10Q8N608 796 aa14.03□□□□□ -0.16
RNF40-205ENST00000563909 SLC16A11Q8NCK7 471 aa14.03□□□□□ -0.16
RNF40-205ENST00000563909 CCDC197Q8NCU1 140 aa14.03□□□□□ -0.16
RNF40-205ENST00000563909 OR10D3Q8NH80 312 aa14.03□□□□□ -0.16
RNF40-205ENST00000563909 RP9Q8TA86 221 aaKnown RBP14.03□□□□□ -0.16
RNF40-205ENST00000563909 MIPOL1Q8TD10 442 aa14.03□□□□□ -0.16
RNF40-205ENST00000563909 BCAS4Q8TDM0 211 aa14.03□□□□□ -0.16
RNF40-205ENST00000563909 ZFP90Q8TF47 636 aa14.03□□□□□ -0.16
RNF40-205ENST00000563909 RADILQ96JH8 1075 aa14.03□□□□□ -0.16
RNF40-205ENST00000563909 USB1Q9BQ65 265 aaKnown RBP14.03□□□□□ -0.16
RNF40-205ENST00000563909 SOX7Q9BT81 388 aa14.03□□□□□ -0.16
RNF40-205ENST00000563909 ZNF696Q9H7X3 374 aa14.03□□□□□ -0.16
RNF40-205ENST00000563909 PTGES2Q9H7Z7 377 aa14.03□□□□□ -0.16
RNF40-205ENST00000563909 SDHAF3Q9NRP4 125 aa14.03□□□□□ -0.16
RNF40-205ENST00000563909 DUSP22Q9NRW4 184 aa14.03□□□□□ -0.16
RNF40-205ENST00000563909 POU2F3Q9UKI9 436 aa14.03□□□□□ -0.16
RNF40-205ENST00000563909 PCDHB14Q9Y5E9 798 aa14.03□□□□□ -0.16
RNF40-205ENST00000563909 NUP214P35658 2090 aaPredicted RBP14.02□□□□□ -0.16
RNF40-205ENST00000563909 LOC100653049A0A140TA62 436 aa14.02□□□□□ -0.17
RNF40-205ENST00000563909 SHISA8B8ZZ34 492 aa14.02□□□□□ -0.17
RNF40-205ENST00000563909 NDUFAB1O14561 156 aa14.02□□□□□ -0.17
RNF40-205ENST00000563909 KRT34O76011 436 aa14.02□□□□□ -0.17
RNF40-205ENST00000563909 AGR2O95994 175 aa14.02□□□□□ -0.17
RNF40-205ENST00000563909 MAGEA8P43361 318 aa14.02□□□□□ -0.17
RNF40-205ENST00000563909 PDLIM4P50479 330 aa14.02□□□□□ -0.17
RNF40-205ENST00000563909 FABP6P51161 128 aa14.02□□□□□ -0.17
RNF40-205ENST00000563909 PPA1Q15181 289 aa14.02□□□□□ -0.17
RNF40-205ENST00000563909 STK11Q15831 433 aa14.02□□□□□ -0.17
RNF40-205ENST00000563909 DUSP5Q16690 384 aa14.02□□□□□ -0.17
RNF40-205ENST00000563909 TFAP2EQ6VUC0 442 aa14.02□□□□□ -0.17
RNF40-205ENST00000563909 BHLHA15Q7RTS1 189 aaPredicted RBP14.02□□□□□ -0.17
RNF40-205ENST00000563909 GALNT10Q86SR1 603 aa14.02□□□□□ -0.17
RNF40-205ENST00000563909 SNX32Q86XE0 403 aa14.02□□□□□ -0.17
RNF40-205ENST00000563909 COX18Q8N8Q8 333 aa14.02□□□□□ -0.17
RNF40-205ENST00000563909 LRRC37BQ96QE4 947 aa14.02□□□□□ -0.17
RNF40-205ENST00000563909 OR7D2Q96RA2 312 aa14.02□□□□□ -0.17
RNF40-205ENST00000563909 RAD21L1Q9H4I0 556 aa14.02□□□□□ -0.17
RNF40-205ENST00000563909 TPT1P8Q9HAU6 139 aa14.02□□□□□ -0.17
RNF40-205ENST00000563909 SLC6A13Q9NSD5 602 aa14.02□□□□□ -0.17
RNF40-205ENST00000563909 STOML1Q9UBI4 398 aa14.02□□□□□ -0.17
RNF40-205ENST00000563909 NDUFS8O00217 210 aa14.01□□□□□ -0.17
RNF40-205ENST00000563909 TMPRSS2O15393 492 aa14.01□□□□□ -0.17
RNF40-205ENST00000563909 CXCL13O43927 109 aa14.01□□□□□ -0.17
RNF40-205ENST00000563909 FADS1O60427 444 aa14.01□□□□□ -0.17
RNF40-205ENST00000563909 OPN1LWP04000 364 aa14.01□□□□□ -0.17
RNF40-205ENST00000563909 PPIBP23284 216 aaKnown RBP14.01□□□□□ -0.17
RNF40-205ENST00000563909 PRDX6P30041 224 aa14.01□□□□□ -0.17
RNF40-205ENST00000563909 KHKP50053 298 aa14.01□□□□□ -0.17
RNF40-205ENST00000563909 POU6F2P78424 691 aaPredicted RBP14.01□□□□□ -0.17
RNF40-205ENST00000563909 ITGADQ13349 1161 aa14.01□□□□□ -0.17
RNF40-205ENST00000563909 NFYCQ13952 458 aa14.01□□□□□ -0.17
RNF40-205ENST00000563909 CARTPTQ16568 116 aa14.01□□□□□ -0.17
RNF40-205ENST00000563909 GLYR1Q49A26 553 aaPredicted RBP14.01□□□□□ -0.17
RNF40-205ENST00000563909 SLC22A25Q6T423 547 aa14.01□□□□□ -0.17
RNF40-205ENST00000563909 DHDDSQ86SQ9 333 aa14.01□□□□□ -0.17
RNF40-205ENST00000563909 RETREG3Q86VR2 466 aa14.01□□□□□ -0.17
RNF40-205ENST00000563909 RNF130Q86XS8 419 aa14.01□□□□□ -0.17
RNF40-205ENST00000563909 PCYOX1LQ8NBM8 494 aa14.01□□□□□ -0.17
RNF40-205ENST00000563909 FBXO30Q8TB52 745 aa14.01□□□□□ -0.17
RNF40-205ENST00000563909 DUSP19Q8WTR2 217 aa14.01□□□□□ -0.17
RNF40-205ENST00000563909 PIK3R3Q92569 461 aa14.01□□□□□ -0.17
RNF40-205ENST00000563909 MUCL1Q96DR8 90 aa14.01□□□□□ -0.17
RNF40-205ENST00000563909 CMTM5Q96DZ9 223 aa14.01□□□□□ -0.17
RNF40-205ENST00000563909 C1GALT1C1Q96EU7 318 aa14.01□□□□□ -0.17
RNF40-205ENST00000563909 FOXN4Q96NZ1 517 aa14.01□□□□□ -0.17
RNF40-205ENST00000563909 BTBD2Q9BX70 525 aa14.01□□□□□ -0.17
RNF40-205ENST00000563909 OR51I1Q9H343 314 aa14.01□□□□□ -0.17
RNF40-205ENST00000563909 EXD2Q9NVH0 621 aa14.01□□□□□ -0.17
RNF40-205ENST00000563909 PAQR5Q9NXK6 330 aaPredicted RBP14.01□□□□□ -0.17
RNF40-205ENST00000563909 SLAMF8Q9P0V8 285 aa14.01□□□□□ -0.17
RNF40-205ENST00000563909 ABCG2Q9UNQ0 655 aa14.01□□□□□ -0.17
RNF40-205ENST00000563909 PLCE1Q9P212 2302 aa14.01□□□□□ -0.17
RNF40-205ENST00000563909 GXYLT2A0PJZ3 443 aa14□□□□□ -0.17
RNF40-205ENST00000563909 CLIC1O00299 241 aa14□□□□□ -0.17
RNF40-205ENST00000563909 FBP2O00757 339 aa14□□□□□ -0.17
RNF40-205ENST00000563909 MRASO14807 208 aa14□□□□□ -0.17
RNF40-205ENST00000563909 RGS9O75916 674 aaPredicted RBP14□□□□□ -0.17
RNF40-205ENST00000563909 IL33O95760 270 aa14□□□□□ -0.17
RNF40-205ENST00000563909 AK1P00568 194 aa14□□□□□ -0.17
RNF40-205ENST00000563909 NPPAP01160 153 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms