RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 DEFB134Q4QY38 66 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 ZNF620Q6ZNG0 422 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 ADGRF3Q8IZF5 1079 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 OR56B1Q8NGI3 324 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 OR1J2Q8NGS2 313 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 FBXW5Q969U6 566 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 PLK3Q9H4B4 646 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 MRPL22Q9NWU5 206 aaKnown RBP13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 TCTE1Q5JU00 501 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 STEAP1BQ6NZ63 245 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 ADIPOR2Q86V24 386 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 SLC35F3Q8IY50 421 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 TMEM18Q96B42 140 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 SLCO5A1Q9H2Y9 848 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 RIPK3Q9Y572 518 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 HS3ST4Q9Y661 456 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 FAM171A2A8MVW0 826 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 CDK5R2Q13319 367 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 TANKQ92844 425 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 RBPMSQ93062 196 aaKnown RBP13□□□□□ -0.33
CSPG4P12-202ENST00000559989 SERINC2Q96SA4 455 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 SULT2B1O00204 365 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 H3F3AP84243 136 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 OR2M3Q8NG83 312 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 MUCL1Q96DR8 90 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 SUCNR1Q9BXA5 334 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 FBXO45P0C2W1 286 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 UNGP13051 313 aaPredicted RBP13□□□□□ -0.33
CSPG4P12-202ENST00000559989 POU3F2P20265 443 aaPredicted RBP13□□□□□ -0.33
CSPG4P12-202ENST00000559989 PBX1P40424 430 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 LGALS4P56470 323 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 LCN8Q6JVE9 175 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 SLC35D2Q76EJ3 337 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 PLD6Q8N2A8 252 aaKnown RBP13□□□□□ -0.33
CSPG4P12-202ENST00000559989 ARNT2Q9HBZ2 717 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 SPO11Q9Y5K1 396 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 H3BML4 177 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 GPR25O00155 361 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 RAD1O60671 282 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 ADAM23O75077 832 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 ADAM11O75078 769 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 TRAPPC2P0DI81 140 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 TRAPPC2BP0DI82 140 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 PCGF2P35227 344 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 EMP3P54852 163 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 APOBEC3HQ6NTF7 200 aaKnown RBP13□□□□□ -0.33
CSPG4P12-202ENST00000559989 FBXL22Q6P050 247 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 LYPD4Q6UWN0 246 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 CLEC20AQ6ZU45 233 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 CD200R1Q8TD46 325 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 SECTM1Q8WVN6 248 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 HSPB6O14558 160 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 CLDN8P56748 225 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 DUSP6Q16828 381 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 PDZD11Q5EBL8 140 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 ZDHHC24Q6UX98 284 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 RPS27LQ71UM5 84 aaKnown RBP13□□□□□ -0.33
CSPG4P12-202ENST00000559989 PGBD5Q8N414 524 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 TFAP2BQ92481 460 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 WDR92Q96MX6 357 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 ZDHHC18Q9NUE0 388 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 KPTNQ9Y664 436 aa13□□□□□ -0.33
CSPG4P12-202ENST00000559989 ACVRL1P37023 503 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 RPS26P62854 115 aaKnown RBP12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 SLC14A2Q15849 920 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 ZNF239Q16600 458 aaKnown RBP12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 ZNF765Q7L2R6 523 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 OR13C5Q8NGS8 318 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 OR13C2Q8NGS9 318 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 PCDHGA9Q9Y5G4 932 aaKnown RBP12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 TCRBV21S2A2A0A5A6 115 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 TMEM72A0PK05 275 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 OR13C7P0DN81 318 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 RAB33AQ14088 237 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 OR6V1Q8N148 313 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 TMEM130Q8N3G9 435 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 OR2T11Q8NH01 316 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 HUS1BQ8NHY5 278 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 NMNAT1Q9HAN9 279 aaPredicted RBP12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 B3GAT1Q9P2W7 334 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 ZNF281Q9Y2X9 895 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 FLT3LGP49771 235 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 DGKZQ13574 1117 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 VASNQ6EMK4 673 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 TMEM217Q8N7C4 229 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 FOXJ1Q92949 421 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 ENPP4Q9Y6X5 453 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 CCDC88AQ3V6T2 1871 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 HELTA6NFD8 242 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 TUBAL3A6NHL2 446 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 F10P00742 488 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 IGHG1P01857 330 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 FOLR3P41439 243 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 IKZF1Q13422 519 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 BLOC1S3Q6QNY0 202 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 TEX50A0A1B0GTY4 177 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 OR6C76A6NM76 312 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 SLC1A3P43003 542 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 NDUFAF7Q7L592 441 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 742.2 ms