RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 CLCA1A8K7I4 914 aa13.01□□□□□ -0.33
TNFRSF1A-216ENST00000543995 CCL21O00585 134 aa13.01□□□□□ -0.33
TNFRSF1A-216ENST00000543995 ADAMDEC1O15204 470 aa13.01□□□□□ -0.33
TNFRSF1A-216ENST00000543995 DIRAS1O95057 198 aa13.01□□□□□ -0.33
TNFRSF1A-216ENST00000543995 HOXD4P09016 255 aaPredicted RBP13.01□□□□□ -0.33
TNFRSF1A-216ENST00000543995 THRBP10828 461 aa13.01□□□□□ -0.33
TNFRSF1A-216ENST00000543995 RHCEP18577 417 aa13.01□□□□□ -0.33
TNFRSF1A-216ENST00000543995 PTNP21246 168 aa13.01□□□□□ -0.33
TNFRSF1A-216ENST00000543995 CLK1P49759 484 aaKnown RBP13.01□□□□□ -0.33
TNFRSF1A-216ENST00000543995 C1orf185Q5T7R7 199 aa13.01□□□□□ -0.33
TNFRSF1A-216ENST00000543995 TTC33Q6PID6 262 aaPredicted RBP13.01□□□□□ -0.33
TNFRSF1A-216ENST00000543995 B3GNT6Q6ZMB0 384 aa13.01□□□□□ -0.33
TNFRSF1A-216ENST00000543995 ZDHHC21Q8IVQ6 265 aa13.01□□□□□ -0.33
TNFRSF1A-216ENST00000543995 ZPLD1Q8TCW7 415 aa13.01□□□□□ -0.33
TNFRSF1A-216ENST00000543995 UTP4Q969X6 686 aaKnown RBP13.01□□□□□ -0.33
TNFRSF1A-216ENST00000543995 ZNF845Q96IR2 970 aaPredicted RBP13.01□□□□□ -0.33
TNFRSF1A-216ENST00000543995 RSRC1Q96IZ7 334 aaKnown RBP13.01□□□□□ -0.33
TNFRSF1A-216ENST00000543995 MPP4Q96JB8 637 aa13.01□□□□□ -0.33
TNFRSF1A-216ENST00000543995 ARL5BQ96KC2 179 aa13.01□□□□□ -0.33
TNFRSF1A-216ENST00000543995 C7orf34Q96L11 122 aa13.01□□□□□ -0.33
TNFRSF1A-216ENST00000543995 ZNF300Q96RE9 604 aaPredicted RBP13.01□□□□□ -0.33
TNFRSF1A-216ENST00000543995 MAGIXQ9H6Y5 334 aa13.01□□□□□ -0.33
TNFRSF1A-216ENST00000543995 IL1RAPQ9NPH3 570 aa13.01□□□□□ -0.33
TNFRSF1A-216ENST00000543995 PAQR5Q9NXK6 330 aaPredicted RBP13.01□□□□□ -0.33
TNFRSF1A-216ENST00000543995 HDGFL3Q9Y3E1 203 aa13.01□□□□□ -0.33
TNFRSF1A-216ENST00000543995 ARHGAP21Q5T5U3 1957 aa13.01□□□□□ -0.33
TNFRSF1A-216ENST00000543995 SULT2B1O00204 365 aa13□□□□□ -0.33
TNFRSF1A-216ENST00000543995 CXCL13O43927 109 aa13□□□□□ -0.33
TNFRSF1A-216ENST00000543995 AHSA1O95433 338 aa13□□□□□ -0.33
TNFRSF1A-216ENST00000543995 SYNGR4O95473 234 aa13□□□□□ -0.33
TNFRSF1A-216ENST00000543995 THY1P04216 161 aa13□□□□□ -0.33
TNFRSF1A-216ENST00000543995 UMPSP11172 480 aa13□□□□□ -0.33
TNFRSF1A-216ENST00000543995 DIO1P49895 249 aa13□□□□□ -0.33
TNFRSF1A-216ENST00000543995 MYBPHQ13203 477 aa13□□□□□ -0.33
TNFRSF1A-216ENST00000543995 ACSF3Q4G176 576 aaPredicted RBP13□□□□□ -0.33
TNFRSF1A-216ENST00000543995 RPTNQ6XPR3 784 aa13□□□□□ -0.33
TNFRSF1A-216ENST00000543995 TMPPEQ6ZT21 453 aa13□□□□□ -0.33
TNFRSF1A-216ENST00000543995 P4HA3Q7Z4N8 544 aa13□□□□□ -0.33
TNFRSF1A-216ENST00000543995 FJX1Q86VR8 437 aa13□□□□□ -0.33
TNFRSF1A-216ENST00000543995 P3H2Q8IVL5 708 aa13□□□□□ -0.33
TNFRSF1A-216ENST00000543995 STK35Q8TDR2 534 aa13□□□□□ -0.33
TNFRSF1A-216ENST00000543995 OSTF1Q92882 214 aa13□□□□□ -0.33
TNFRSF1A-216ENST00000543995 ADGRG7Q96K78 797 aa13□□□□□ -0.33
TNFRSF1A-216ENST00000543995 PRRG4Q9BZD6 226 aa13□□□□□ -0.33
TNFRSF1A-216ENST00000543995 COQ10BQ9H8M1 238 aa13□□□□□ -0.33
TNFRSF1A-216ENST00000543995 MCTS1Q9ULC4 181 aaKnown RBP13□□□□□ -0.33
TNFRSF1A-216ENST00000543995 PRRC2CQ9Y520 2896 aaKnown RBP13□□□□□ -0.33
TNFRSF1A-216ENST00000543995 KIAA1549Q9HCM3 1950 aa13□□□□□ -0.33
TNFRSF1A-216ENST00000543995 A0A1B0GUH1 482 aa12.99□□□□□ -0.33
TNFRSF1A-216ENST00000543995 J3QKU1 62 aa12.99□□□□□ -0.33
TNFRSF1A-216ENST00000543995 FFAR1O14842 300 aa12.99□□□□□ -0.33
TNFRSF1A-216ENST00000543995 LRRTM2O43300 516 aa12.99□□□□□ -0.33
TNFRSF1A-216ENST00000543995 MT-ND1P03886 318 aa12.99□□□□□ -0.33
TNFRSF1A-216ENST00000543995 GPIP06744 558 aa12.99□□□□□ -0.33
TNFRSF1A-216ENST00000543995 IDUAP35475 653 aa12.99□□□□□ -0.33
TNFRSF1A-216ENST00000543995 RPS5P46782 204 aaKnown RBP12.99□□□□□ -0.33
TNFRSF1A-216ENST00000543995 OR2B6P58173 313 aa12.99□□□□□ -0.33
TNFRSF1A-216ENST00000543995 CSNK2A1P68400 391 aaPredicted RBP12.99□□□□□ -0.33
TNFRSF1A-216ENST00000543995 PON3Q15166 354 aa12.99□□□□□ -0.33
TNFRSF1A-216ENST00000543995 C1orf140Q5VVS0 124 aa12.99□□□□□ -0.33
TNFRSF1A-216ENST00000543995 RTL6Q6ICC9 239 aa12.99□□□□□ -0.33
TNFRSF1A-216ENST00000543995 C5orf46Q6UWT4 87 aa12.99□□□□□ -0.33
TNFRSF1A-216ENST00000543995 PLXDC2Q6UX71 529 aa12.99□□□□□ -0.33
TNFRSF1A-216ENST00000543995 LINC00114Q6XXX2 140 aa12.99□□□□□ -0.33
TNFRSF1A-216ENST00000543995 WDR88Q6ZMY6 472 aa12.99□□□□□ -0.33
TNFRSF1A-216ENST00000543995 TSEN54Q7Z6J9 526 aaKnown RBP12.99□□□□□ -0.33
TNFRSF1A-216ENST00000543995 NKAIN4Q8IVV8 208 aa12.99□□□□□ -0.33
TNFRSF1A-216ENST00000543995 ADGRG5Q8IZF4 528 aa12.99□□□□□ -0.33
TNFRSF1A-216ENST00000543995 OFCC1Q8IZS5 231 aa12.99□□□□□ -0.33
TNFRSF1A-216ENST00000543995 TMEM255BQ8WV15 326 aa12.99□□□□□ -0.33
TNFRSF1A-216ENST00000543995 CANT1Q8WVQ1 401 aa12.99□□□□□ -0.33
TNFRSF1A-216ENST00000543995 CPNE4Q96A23 557 aaPredicted RBP12.99□□□□□ -0.33
TNFRSF1A-216ENST00000543995 ZNF347Q96SE7 839 aa12.99□□□□□ -0.33
TNFRSF1A-216ENST00000543995 EPYCQ99645 322 aa12.99□□□□□ -0.33
TNFRSF1A-216ENST00000543995 TAPBPLQ9BX59 468 aa12.99□□□□□ -0.33
TNFRSF1A-216ENST00000543995 SRXN1Q9BYN0 137 aa12.99□□□□□ -0.33
TNFRSF1A-216ENST00000543995 POTEKPQ9BYX7 375 aa12.99□□□□□ -0.33
TNFRSF1A-216ENST00000543995 MEMO1Q9Y316 297 aa12.99□□□□□ -0.33
TNFRSF1A-216ENST00000543995 FAM215AQ9Y5M1 114 aa12.99□□□□□ -0.33
TNFRSF1A-216ENST00000543995 PHF3Q92576 2039 aaKnown RBP12.99□□□□□ -0.33
TNFRSF1A-216ENST00000543995 IGKV1D-42A0A075B6H8 117 aa12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 TCRBV3S1A0A5B6 114 aa12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 SLC22A20A6NK97 555 aa12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 KDM4EB2RXH2 506 aaPredicted RBP12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 E9PLN8 166 aa12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 KPNA4O00629 521 aaPredicted RBP12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 LYPD3O95274 346 aa12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 H1F0P07305 194 aaKnown RBP12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 RAP2AP10114 183 aa12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 NQO1P15559 274 aaKnown RBP12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 RAC3P60763 192 aa12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 SPIBQ01892 262 aa12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 EGR4Q05215 589 aa12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 TRAM2Q15035 370 aa12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 OR7A5Q15622 319 aa12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 NSUN5P2Q63ZY6 315 aa12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 TMEM211Q6ICI0 200 aa12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 RPRMLQ8N4K4 120 aa12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 SLC25A36Q96CQ1 311 aa12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 ZHX1-C8orf76Q96EF9 292 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms