RNA–Protein interactions for RNA: ENST00000521167.1

TRAPPC9-209, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-209ENST00000521167 PAGE3Q5JUK9 113 aa9.27□□□□□ -0.93
TRAPPC9-209ENST00000521167 RNF220Q5VTB9 566 aa9.27□□□□□ -0.93
TRAPPC9-209ENST00000521167 ZNF836Q6ZNA1 936 aa9.27□□□□□ -0.93
TRAPPC9-209ENST00000521167 ZNF550Q7Z398 422 aa9.27□□□□□ -0.93
TRAPPC9-209ENST00000521167 MTDHQ86UE4 582 aaKnown RBP9.27□□□□□ -0.93
TRAPPC9-209ENST00000521167 MSRB3Q8IXL7 192 aa9.27□□□□□ -0.93
TRAPPC9-209ENST00000521167 BBS10Q8TAM1 723 aa9.27□□□□□ -0.93
TRAPPC9-209ENST00000521167 ABHD3Q8WU67 409 aa9.27□□□□□ -0.93
TRAPPC9-209ENST00000521167 THOC1Q96FV9 657 aaKnown RBP9.27□□□□□ -0.93
TRAPPC9-209ENST00000521167 SPATA9Q9BWV2 254 aa9.27□□□□□ -0.93
TRAPPC9-209ENST00000521167 HDHD5Q9BXW7 423 aa9.27□□□□□ -0.93
TRAPPC9-209ENST00000521167 ADAM19Q9H013 955 aa9.27□□□□□ -0.93
TRAPPC9-209ENST00000521167 FAM107BQ9H098 131 aa9.27□□□□□ -0.93
TRAPPC9-209ENST00000521167 OR10A4Q9H209 315 aa9.27□□□□□ -0.93
TRAPPC9-209ENST00000521167 ZNF385DQ9H6B1 395 aa9.27□□□□□ -0.93
TRAPPC9-209ENST00000521167 BCO1Q9HAY6 547 aa9.27□□□□□ -0.93
TRAPPC9-209ENST00000521167 NPHS2Q9NP85 383 aa9.27□□□□□ -0.93
TRAPPC9-209ENST00000521167 MRGBPQ9NV56 204 aa9.27□□□□□ -0.93
TRAPPC9-209ENST00000521167 ZNF226Q9NYT6 803 aa9.27□□□□□ -0.93
TRAPPC9-209ENST00000521167 SLC25A37Q9NYZ2 338 aa9.27□□□□□ -0.93
TRAPPC9-209ENST00000521167 SLAMF8Q9P0V8 285 aa9.27□□□□□ -0.93
TRAPPC9-209ENST00000521167 KLHL13Q9P2N7 655 aa9.27□□□□□ -0.93
TRAPPC9-209ENST00000521167 LEF1Q9UJU2 399 aaPredicted RBP9.27□□□□□ -0.93
TRAPPC9-209ENST00000521167 DCTN4Q9UJW0 460 aa9.27□□□□□ -0.93
TRAPPC9-209ENST00000521167 ZNF443Q9Y2A4 671 aaPredicted RBP9.27□□□□□ -0.93
TRAPPC9-209ENST00000521167 TMED7Q9Y3B3 224 aa9.27□□□□□ -0.93
TRAPPC9-209ENST00000521167 AKAP9Q99996 3911 aa9.27□□□□□ -0.93
TRAPPC9-209ENST00000521167 MAP1AP78559 2803 aaPredicted RBP9.27□□□□□ -0.93
TRAPPC9-209ENST00000521167 A0A0G2JND7 137 aa9.26□□□□□ -0.93
TRAPPC9-209ENST00000521167 ZNF724A8MTY0 619 aa9.26□□□□□ -0.93
TRAPPC9-209ENST00000521167 C5orf58C9J3I9 102 aa9.26□□□□□ -0.93
TRAPPC9-209ENST00000521167 AP3D1O14617 1153 aa9.26□□□□□ -0.93
TRAPPC9-209ENST00000521167 HRGP04196 525 aa9.26□□□□□ -0.93
TRAPPC9-209ENST00000521167 ARAFP10398 606 aa9.26□□□□□ -0.93
TRAPPC9-209ENST00000521167 TFPIP10646 304 aa9.26□□□□□ -0.93
TRAPPC9-209ENST00000521167 ETS2P15036 469 aa9.26□□□□□ -0.93
TRAPPC9-209ENST00000521167 CRYGSP22914 178 aa9.26□□□□□ -0.93
TRAPPC9-209ENST00000521167 DNAJA1P31689 397 aaKnown RBP9.26□□□□□ -0.93
TRAPPC9-209ENST00000521167 ACAA2P42765 397 aaKnown RBP9.26□□□□□ -0.93
TRAPPC9-209ENST00000521167 COPZ1P61923 177 aa9.26□□□□□ -0.93
TRAPPC9-209ENST00000521167 RASGEF1BQ0VAM2 473 aa9.26□□□□□ -0.93
TRAPPC9-209ENST00000521167 RUNDC3AQ59EK9 446 aa9.26□□□□□ -0.93
TRAPPC9-209ENST00000521167 ZNF311Q5JNZ3 666 aa9.26□□□□□ -0.93
TRAPPC9-209ENST00000521167 GCNT6Q5T4J0 391 aa9.26□□□□□ -0.93
TRAPPC9-209ENST00000521167 FBXW10Q5XX13 1052 aa9.26□□□□□ -0.93
TRAPPC9-209ENST00000521167 WBP2NLQ6ICG8 309 aa9.26□□□□□ -0.93
TRAPPC9-209ENST00000521167 REEP3Q6NUK4 255 aa9.26□□□□□ -0.93
TRAPPC9-209ENST00000521167 DLEU7Q6UYE1 221 aa9.26□□□□□ -0.93
TRAPPC9-209ENST00000521167 VRK2Q86Y07 508 aa9.26□□□□□ -0.93
TRAPPC9-209ENST00000521167 TUSC5Q8IXB3 177 aa9.26□□□□□ -0.93
TRAPPC9-209ENST00000521167 DPP10Q8N608 796 aa9.26□□□□□ -0.93
TRAPPC9-209ENST00000521167 DDIT4LQ96D03 193 aa9.26□□□□□ -0.93
TRAPPC9-209ENST00000521167 ZHX1-C8orf76Q96EF9 292 aa9.26□□□□□ -0.93
TRAPPC9-209ENST00000521167 PSD2Q9BQI7 771 aa9.26□□□□□ -0.93
TRAPPC9-209ENST00000521167 MED18Q9BUE0 208 aa9.26□□□□□ -0.93
TRAPPC9-209ENST00000521167 POTEKPQ9BYX7 375 aa9.26□□□□□ -0.93
TRAPPC9-209ENST00000521167 KLHL4Q9C0H6 718 aa9.26□□□□□ -0.93
TRAPPC9-209ENST00000521167 CCDC134Q9H6E4 229 aa9.26□□□□□ -0.93
TRAPPC9-209ENST00000521167 TMEM38AQ9H6F2 299 aa9.26□□□□□ -0.93
TRAPPC9-209ENST00000521167 FGFR1OP2Q9NVK5 253 aa9.26□□□□□ -0.93
TRAPPC9-209ENST00000521167 VAPAQ9P0L0 249 aa9.26□□□□□ -0.93
TRAPPC9-209ENST00000521167 TMEM181Q9P2C4 612 aa9.26□□□□□ -0.93
TRAPPC9-209ENST00000521167 OSGIN1Q9UJX0 560 aa9.26□□□□□ -0.93
TRAPPC9-209ENST00000521167 ITGB1BP2Q9UKP3 347 aa9.26□□□□□ -0.93
TRAPPC9-209ENST00000521167 GPR52Q9Y2T5 361 aa9.26□□□□□ -0.93
TRAPPC9-209ENST00000521167 NDUFAF1Q9Y375 327 aa9.26□□□□□ -0.93
TRAPPC9-209ENST00000521167 ALPK2Q86TB3 2170 aa9.25□□□□□ -0.93
TRAPPC9-209ENST00000521167 HIVEP1P15822 2718 aa9.25□□□□□ -0.93
TRAPPC9-209ENST00000521167 IGKV3D-15A0A087WSY6 115 aa9.25□□□□□ -0.93
TRAPPC9-209ENST00000521167 IGHV3-15A0A0B4J1V0 119 aa9.25□□□□□ -0.93
TRAPPC9-209ENST00000521167 GMNCA6NCL1 334 aa9.25□□□□□ -0.93
TRAPPC9-209ENST00000521167 ANGPT2O15123 496 aa9.25□□□□□ -0.93
TRAPPC9-209ENST00000521167 SMAD9O15198 467 aaKnown RBP9.25□□□□□ -0.93
TRAPPC9-209ENST00000521167 EIF1BO60739 113 aaKnown RBP9.25□□□□□ -0.93
TRAPPC9-209ENST00000521167 PGM3O95394 542 aa9.25□□□□□ -0.93
TRAPPC9-209ENST00000521167 GKN3PP0CG01 181 aa9.25□□□□□ -0.93
TRAPPC9-209ENST00000521167 TROVE2P10155 538 aaKnown RBP eCLIP9.25□□□□□ -0.93
TRAPPC9-209ENST00000521167 PSMB1P20618 241 aaKnown RBP9.25□□□□□ -0.93
TRAPPC9-209ENST00000521167 DNASE1P24855 282 aa9.25□□□□□ -0.93
TRAPPC9-209ENST00000521167 CXCR1P25024 350 aa9.25□□□□□ -0.93
TRAPPC9-209ENST00000521167 TACR3P29371 465 aa9.25□□□□□ -0.93
TRAPPC9-209ENST00000521167 SLC35A1P78382 337 aa9.25□□□□□ -0.93
TRAPPC9-209ENST00000521167 CDK6Q00534 326 aa9.25□□□□□ -0.93
TRAPPC9-209ENST00000521167 P2RY6Q15077 328 aa9.25□□□□□ -0.93
TRAPPC9-209ENST00000521167 TESK1Q15569 626 aa9.25□□□□□ -0.93
TRAPPC9-209ENST00000521167 EXOC3L2Q2M3D2 409 aa9.25□□□□□ -0.93
TRAPPC9-209ENST00000521167 STAC2Q6ZMT1 411 aa9.25□□□□□ -0.93
TRAPPC9-209ENST00000521167 NUFIP2Q7Z417 695 aaKnown RBP9.25□□□□□ -0.93
TRAPPC9-209ENST00000521167 KRT73Q86Y46 540 aa9.25□□□□□ -0.93
TRAPPC9-209ENST00000521167 CLIP4Q8N3C7 705 aa9.25□□□□□ -0.93
TRAPPC9-209ENST00000521167 MAL2Q969L2 176 aa9.25□□□□□ -0.93
TRAPPC9-209ENST00000521167 ARL5BQ96KC2 179 aa9.25□□□□□ -0.93
TRAPPC9-209ENST00000521167 ZNF317Q96PQ6 595 aaPredicted RBP9.25□□□□□ -0.93
TRAPPC9-209ENST00000521167 NAA11Q9BSU3 229 aaPredicted RBP9.25□□□□□ -0.93
TRAPPC9-209ENST00000521167 SPATA5L1Q9BVQ7 753 aa9.25□□□□□ -0.93
TRAPPC9-209ENST00000521167 C12orf49Q9H741 205 aa9.25□□□□□ -0.93
TRAPPC9-209ENST00000521167 PLEKHF2Q9H8W4 249 aa9.25□□□□□ -0.93
TRAPPC9-209ENST00000521167 RLIMQ9NVW2 624 aa9.25□□□□□ -0.93
TRAPPC9-209ENST00000521167 KLHL28Q9NXS3 571 aa9.25□□□□□ -0.93
TRAPPC9-209ENST00000521167 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms