RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 C11orf65Q8NCR3 313 aa11.38□□□□□ -0.59
CLCN3-210ENST00000515420 PIGXQ8TBF5 258 aa11.38□□□□□ -0.59
CLCN3-210ENST00000515420 SH3GL1Q99961 368 aa11.38□□□□□ -0.59
CLCN3-210ENST00000515420 GPATCH1Q9BRR8 931 aaKnown RBP11.38□□□□□ -0.59
CLCN3-210ENST00000515420 POLDIP3Q9BY77 421 aaKnown RBP11.38□□□□□ -0.59
CLCN3-210ENST00000515420 POTEKPQ9BYX7 375 aa11.38□□□□□ -0.59
CLCN3-210ENST00000515420 CLEC4MQ9H2X3 399 aaPredicted RBP11.38□□□□□ -0.59
CLCN3-210ENST00000515420 KAT8Q9H7Z6 458 aaKnown RBP11.38□□□□□ -0.59
CLCN3-210ENST00000515420 SAR1AQ9NR31 198 aa11.38□□□□□ -0.59
CLCN3-210ENST00000515420 ZNF226Q9NYT6 803 aa11.38□□□□□ -0.59
CLCN3-210ENST00000515420 EMC3Q9P0I2 261 aa11.38□□□□□ -0.59
CLCN3-210ENST00000515420 TMEM181Q9P2C4 612 aa11.38□□□□□ -0.59
CLCN3-210ENST00000515420 ING1Q9UK53 422 aaPredicted RBP11.38□□□□□ -0.59
CLCN3-210ENST00000515420 POLQO75417 2590 aa11.38□□□□□ -0.59
CLCN3-210ENST00000515420 TMEM72A0PK05 275 aa11.37□□□□□ -0.59
CLCN3-210ENST00000515420 FBP2O00757 339 aa11.37□□□□□ -0.59
CLCN3-210ENST00000515420 CASKO14936 926 aa11.37□□□□□ -0.59
CLCN3-210ENST00000515420 CNOT4O95628 575 aaKnown RBP11.37□□□□□ -0.59
CLCN3-210ENST00000515420 PSMB1P20618 241 aaKnown RBP11.37□□□□□ -0.59
CLCN3-210ENST00000515420 SLC16A1P53985 500 aa11.37□□□□□ -0.59
CLCN3-210ENST00000515420 PCBP3P57721 371 aaKnown RBP11.37□□□□□ -0.59
CLCN3-210ENST00000515420 SLC35A1P78382 337 aa11.37□□□□□ -0.59
CLCN3-210ENST00000515420 H3F3AP84243 136 aa11.37□□□□□ -0.59
CLCN3-210ENST00000515420 KLF10Q13118 480 aa11.37□□□□□ -0.59
CLCN3-210ENST00000515420 CYLC2Q14093 348 aaPredicted RBP11.37□□□□□ -0.59
CLCN3-210ENST00000515420 CYP51A1Q16850 503 aa11.37□□□□□ -0.59
CLCN3-210ENST00000515420 SERPINA11Q86U17 422 aa11.37□□□□□ -0.59
CLCN3-210ENST00000515420 PTOV1Q86YD1 416 aa11.37□□□□□ -0.59
CLCN3-210ENST00000515420 LSMEM1Q8N8F7 131 aa11.37□□□□□ -0.59
CLCN3-210ENST00000515420 OR8J3Q8NGG0 315 aa11.37□□□□□ -0.59
CLCN3-210ENST00000515420 C10orf82Q8WW14 230 aa11.37□□□□□ -0.59
CLCN3-210ENST00000515420 MED18Q9BUE0 208 aa11.37□□□□□ -0.59
CLCN3-210ENST00000515420 HDHD5Q9BXW7 423 aa11.37□□□□□ -0.59
CLCN3-210ENST00000515420 OR11A1Q9GZK7 315 aa11.37□□□□□ -0.59
CLCN3-210ENST00000515420 C12orf10Q9HB07 376 aa11.37□□□□□ -0.59
CLCN3-210ENST00000515420 EDARQ9UNE0 448 aa11.37□□□□□ -0.59
CLCN3-210ENST00000515420 IGHV3-15A0A0B4J1V0 119 aa11.36□□□□□ -0.59
CLCN3-210ENST00000515420 ZNF716A6NP11 495 aa11.36□□□□□ -0.59
CLCN3-210ENST00000515420 A8MVM7 634 aa11.36□□□□□ -0.59
CLCN3-210ENST00000515420 TMEM229AB2RXF0 380 aa11.36□□□□□ -0.59
CLCN3-210ENST00000515420 GPR171O14626 319 aa11.36□□□□□ -0.59
CLCN3-210ENST00000515420 GPIP06744 558 aa11.36□□□□□ -0.59
CLCN3-210ENST00000515420 PRG2P13727 222 aa11.36□□□□□ -0.59
CLCN3-210ENST00000515420 OR3A2P47893 321 aa11.36□□□□□ -0.59
CLCN3-210ENST00000515420 MTPNP58546 118 aa11.36□□□□□ -0.59
CLCN3-210ENST00000515420 MMEL1Q495T6 779 aa11.36□□□□□ -0.59
CLCN3-210ENST00000515420 INTS11Q5TA45 600 aaKnown RBP11.36□□□□□ -0.59
CLCN3-210ENST00000515420 PAQR6Q6TCH4 344 aa11.36□□□□□ -0.59
CLCN3-210ENST00000515420 C5orf46Q6UWT4 87 aa11.36□□□□□ -0.59
CLCN3-210ENST00000515420 C6orf89Q6UWU4 347 aa11.36□□□□□ -0.59
CLCN3-210ENST00000515420 STAC2Q6ZMT1 411 aa11.36□□□□□ -0.59
CLCN3-210ENST00000515420 NUFIP2Q7Z417 695 aaKnown RBP11.36□□□□□ -0.59
CLCN3-210ENST00000515420 GALNT5Q7Z7M9 940 aa11.36□□□□□ -0.59
CLCN3-210ENST00000515420 ARMC8Q8IUR7 673 aa11.36□□□□□ -0.59
CLCN3-210ENST00000515420 GABRG1Q8N1C3 465 aa11.36□□□□□ -0.59
CLCN3-210ENST00000515420 CADM2Q8N3J6 435 aa11.36□□□□□ -0.59
CLCN3-210ENST00000515420 STK35Q8TDR2 534 aa11.36□□□□□ -0.59
CLCN3-210ENST00000515420 NINJ1Q92982 152 aa11.36□□□□□ -0.59
CLCN3-210ENST00000515420 C3orf49Q96BT1 292 aa11.36□□□□□ -0.59
CLCN3-210ENST00000515420 WFIKKN1Q96NZ8 548 aa11.36□□□□□ -0.59
CLCN3-210ENST00000515420 USB1Q9BQ65 265 aaKnown RBP11.36□□□□□ -0.59
CLCN3-210ENST00000515420 PIF1Q9H611 641 aa11.36□□□□□ -0.59
CLCN3-210ENST00000515420 C12orf49Q9H741 205 aa11.36□□□□□ -0.59
CLCN3-210ENST00000515420 KLHL28Q9NXS3 571 aa11.36□□□□□ -0.59
CLCN3-210ENST00000515420 TESQ9UGI8 421 aaKnown RBP11.36□□□□□ -0.59
CLCN3-210ENST00000515420 GPR52Q9Y2T5 361 aa11.36□□□□□ -0.59
CLCN3-210ENST00000515420 CAPN7Q9Y6W3 813 aa11.36□□□□□ -0.59
CLCN3-210ENST00000515420 HRNRQ86YZ3 2850 aaPredicted RBP11.36□□□□□ -0.59
CLCN3-210ENST00000515420 OTOGQ6ZRI0 2925 aa11.36□□□□□ -0.59
CLCN3-210ENST00000515420 CCDC168Q8NDH2 2452 aa11.35□□□□□ -0.59
CLCN3-210ENST00000515420 CSMD1Q96PZ7 3565 aa11.35□□□□□ -0.59
CLCN3-210ENST00000515420 FXYD1O00168 92 aa11.35□□□□□ -0.59
CLCN3-210ENST00000515420 MRASO14807 208 aa11.35□□□□□ -0.59
CLCN3-210ENST00000515420 FZD7O75084 574 aa11.35□□□□□ -0.59
CLCN3-210ENST00000515420 NPIPB7O75200 414 aa11.35□□□□□ -0.59
CLCN3-210ENST00000515420 GCM2O75603 506 aaPredicted RBP11.35□□□□□ -0.59
CLCN3-210ENST00000515420 MFN2O95140 757 aa11.35□□□□□ -0.59
CLCN3-210ENST00000515420 HRGP04196 525 aa11.35□□□□□ -0.59
CLCN3-210ENST00000515420 C8BP07358 591 aa11.35□□□□□ -0.59
CLCN3-210ENST00000515420 IMPDH2P12268 514 aa11.35□□□□□ -0.59
CLCN3-210ENST00000515420 CRYGSP22914 178 aa11.35□□□□□ -0.59
CLCN3-210ENST00000515420 PCGF2P35227 344 aa11.35□□□□□ -0.59
CLCN3-210ENST00000515420 IDUAP35475 653 aa11.35□□□□□ -0.59
CLCN3-210ENST00000515420 SELPLGQ14242 412 aa11.35□□□□□ -0.59
CLCN3-210ENST00000515420 P2RY6Q15077 328 aa11.35□□□□□ -0.59
CLCN3-210ENST00000515420 EXOC3L2Q2M3D2 409 aa11.35□□□□□ -0.59
CLCN3-210ENST00000515420 REP15Q6BDI9 236 aa11.35□□□□□ -0.59
CLCN3-210ENST00000515420 NANOGP8Q6NSW7 305 aa11.35□□□□□ -0.59
CLCN3-210ENST00000515420 Q6ZT83 130 aa11.35□□□□□ -0.59
CLCN3-210ENST00000515420 PATL1Q86TB9 770 aaKnown RBP11.35□□□□□ -0.59
CLCN3-210ENST00000515420 ATG4DQ86TL0 474 aaPredicted RBP11.35□□□□□ -0.59
CLCN3-210ENST00000515420 CDC20BQ86Y33 519 aa11.35□□□□□ -0.59
CLCN3-210ENST00000515420 PCYOX1LQ8NBM8 494 aa11.35□□□□□ -0.59
CLCN3-210ENST00000515420 STEAP2Q8NFT2 490 aa11.35□□□□□ -0.59
CLCN3-210ENST00000515420 DNAJA4Q8WW22 397 aaPredicted RBP11.35□□□□□ -0.59
CLCN3-210ENST00000515420 LRRC58Q96CX6 371 aa11.35□□□□□ -0.59
CLCN3-210ENST00000515420 NAA11Q9BSU3 229 aaPredicted RBP11.35□□□□□ -0.59
CLCN3-210ENST00000515420 RSPO3Q9BXY4 272 aaPredicted RBP11.35□□□□□ -0.59
CLCN3-210ENST00000515420 TRIM2Q9C040 744 aa11.35□□□□□ -0.59
CLCN3-210ENST00000515420 KLHL4Q9C0H6 718 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms