RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 CCKARP32238 428 aa17.69■□□□□ 0.42
SFXN1-209ENST00000508290 SLC16A1P53985 500 aa17.69■□□□□ 0.42
SFXN1-209ENST00000508290 GUCY1A3Q02108 690 aa17.69■□□□□ 0.42
SFXN1-209ENST00000508290 CYLC2Q14093 348 aaPredicted RBP17.69■□□□□ 0.42
SFXN1-209ENST00000508290 TFAP2EQ6VUC0 442 aa17.69■□□□□ 0.42
SFXN1-209ENST00000508290 GALNT5Q7Z7M9 940 aa17.69■□□□□ 0.42
SFXN1-209ENST00000508290 CDC20BQ86Y33 519 aa17.69■□□□□ 0.42
SFXN1-209ENST00000508290 CLIP4Q8N3C7 705 aa17.69■□□□□ 0.42
SFXN1-209ENST00000508290 STEAP2Q8NFT2 490 aa17.69■□□□□ 0.42
SFXN1-209ENST00000508290 WFIKKN1Q96NZ8 548 aa17.69■□□□□ 0.42
SFXN1-209ENST00000508290 KLHL4Q9C0H6 718 aa17.69■□□□□ 0.42
SFXN1-209ENST00000508290 SLC13A4Q9UKG4 626 aa17.69■□□□□ 0.42
SFXN1-209ENST00000508290 A8MVM7 634 aa17.68■□□□□ 0.42
SFXN1-209ENST00000508290 HRGP04196 525 aa17.68■□□□□ 0.42
SFXN1-209ENST00000508290 GKN3PP0CG01 181 aa17.68■□□□□ 0.42
SFXN1-209ENST00000508290 IDUAP35475 653 aa17.68■□□□□ 0.42
SFXN1-209ENST00000508290 OR3A2P47893 321 aa17.68■□□□□ 0.42
SFXN1-209ENST00000508290 H3F3AP84243 136 aa17.68■□□□□ 0.42
SFXN1-209ENST00000508290 CYP51A1Q16850 503 aa17.68■□□□□ 0.42
SFXN1-209ENST00000508290 TRMT5Q32P41 509 aaKnown RBP17.68■□□□□ 0.42
SFXN1-209ENST00000508290 C5orf46Q6UWT4 87 aa17.68■□□□□ 0.42
SFXN1-209ENST00000508290 STAC2Q6ZMT1 411 aa17.68■□□□□ 0.42
SFXN1-209ENST00000508290 SERPINA11Q86U17 422 aa17.68■□□□□ 0.42
SFXN1-209ENST00000508290 RETREG3Q86VR2 466 aa17.68■□□□□ 0.42
SFXN1-209ENST00000508290 CADM2Q8N3J6 435 aa17.68■□□□□ 0.42
SFXN1-209ENST00000508290 LSMEM1Q8N8F7 131 aa17.68■□□□□ 0.42
SFXN1-209ENST00000508290 ARL5BQ96KC2 179 aa17.68■□□□□ 0.42
SFXN1-209ENST00000508290 OR11A1Q9GZK7 315 aa17.68■□□□□ 0.42
SFXN1-209ENST00000508290 IKZF5Q9H5V7 419 aa17.68■□□□□ 0.42
SFXN1-209ENST00000508290 PIF1Q9H611 641 aa17.68■□□□□ 0.42
SFXN1-209ENST00000508290 C12orf49Q9H741 205 aa17.68■□□□□ 0.42
SFXN1-209ENST00000508290 HEATR5AQ86XA9 2040 aa17.67■□□□□ 0.42
SFXN1-209ENST00000508290 IGHV3-15A0A0B4J1V0 119 aa17.67■□□□□ 0.42
SFXN1-209ENST00000508290 TMEM72A0PK05 275 aa17.67■□□□□ 0.42
SFXN1-209ENST00000508290 GPIP06744 558 aa17.67■□□□□ 0.42
SFXN1-209ENST00000508290 OR2B6P58173 313 aa17.67■□□□□ 0.42
SFXN1-209ENST00000508290 ADRM1Q16186 407 aa17.67■□□□□ 0.42
SFXN1-209ENST00000508290 INTS11Q5TA45 600 aaKnown RBP17.67■□□□□ 0.42
SFXN1-209ENST00000508290 PAQR6Q6TCH4 344 aa17.67■□□□□ 0.42
SFXN1-209ENST00000508290 Q6ZT83 130 aa17.67■□□□□ 0.42
SFXN1-209ENST00000508290 NET1Q7Z628 596 aaPredicted RBP17.67■□□□□ 0.42
SFXN1-209ENST00000508290 GABRG1Q8N1C3 465 aa17.67■□□□□ 0.42
SFXN1-209ENST00000508290 PCYOX1LQ8NBM8 494 aa17.67■□□□□ 0.42
SFXN1-209ENST00000508290 STK35Q8TDR2 534 aa17.67■□□□□ 0.42
SFXN1-209ENST00000508290 TRIM2Q9C040 744 aa17.67■□□□□ 0.42
SFXN1-209ENST00000508290 KAT8Q9H7Z6 458 aaKnown RBP17.67■□□□□ 0.42
SFXN1-209ENST00000508290 SAR1AQ9NR31 198 aa17.67■□□□□ 0.42
SFXN1-209ENST00000508290 RPS6KB2Q9UBS0 482 aa17.67■□□□□ 0.42
SFXN1-209ENST00000508290 TESQ9UGI8 421 aaKnown RBP17.67■□□□□ 0.42
SFXN1-209ENST00000508290 ING1Q9UK53 422 aaPredicted RBP17.67■□□□□ 0.42
SFXN1-209ENST00000508290 CHST2Q9Y4C5 530 aa17.67■□□□□ 0.42
SFXN1-209ENST00000508290 CSMD1Q96PZ7 3565 aa17.67■□□□□ 0.42
SFXN1-209ENST00000508290 ANKRD17O75179 2603 aaKnown RBP17.67■□□□□ 0.42
SFXN1-209ENST00000508290 POLQO75417 2590 aa17.66■□□□□ 0.42
SFXN1-209ENST00000508290 CCNA2P20248 432 aa17.66■□□□□ 0.42
SFXN1-209ENST00000508290 DNAJA1P31689 397 aaKnown RBP17.66■□□□□ 0.42
SFXN1-209ENST00000508290 NCALDP61601 193 aa17.66■□□□□ 0.42
SFXN1-209ENST00000508290 KLF10Q13118 480 aa17.66■□□□□ 0.42
SFXN1-209ENST00000508290 MMEL1Q495T6 779 aa17.66■□□□□ 0.42
SFXN1-209ENST00000508290 C6orf89Q6UWU4 347 aa17.66■□□□□ 0.42
SFXN1-209ENST00000508290 NUFIP2Q7Z417 695 aaKnown RBP17.66■□□□□ 0.42
SFXN1-209ENST00000508290 PATL1Q86TB9 770 aaKnown RBP17.66■□□□□ 0.42
SFXN1-209ENST00000508290 ARMC8Q8IUR7 673 aa17.66■□□□□ 0.42
SFXN1-209ENST00000508290 C10orf111Q8N326 155 aa17.66■□□□□ 0.42
SFXN1-209ENST00000508290 OR8J3Q8NGG0 315 aa17.66■□□□□ 0.42
SFXN1-209ENST00000508290 DNAJA4Q8WW22 397 aaPredicted RBP17.66■□□□□ 0.42
SFXN1-209ENST00000508290 SF3B5Q9BWJ5 86 aaKnown RBP17.66■□□□□ 0.42
SFXN1-209ENST00000508290 TAPBPLQ9BX59 468 aa17.66■□□□□ 0.42
SFXN1-209ENST00000508290 ACTR6Q9GZN1 396 aa17.66■□□□□ 0.42
SFXN1-209ENST00000508290 PARPBPQ9NWS1 579 aa17.66■□□□□ 0.42
SFXN1-209ENST00000508290 ST6GALNAC2Q9UJ37 374 aa17.66■□□□□ 0.42
SFXN1-209ENST00000508290 ZNF716A6NP11 495 aa17.65■□□□□ 0.42
SFXN1-209ENST00000508290 VAMP5O95183 116 aa17.65■□□□□ 0.42
SFXN1-209ENST00000508290 C8BP07358 591 aa17.65■□□□□ 0.42
SFXN1-209ENST00000508290 PNMTP11086 282 aa17.65■□□□□ 0.42
SFXN1-209ENST00000508290 NR1H2P55055 460 aa17.65■□□□□ 0.42
SFXN1-209ENST00000508290 PCBP3P57721 371 aaKnown RBP17.65■□□□□ 0.42
SFXN1-209ENST00000508290 MTPNP58546 118 aa17.65■□□□□ 0.42
SFXN1-209ENST00000508290 ITGADQ13349 1161 aa17.65■□□□□ 0.42
SFXN1-209ENST00000508290 SFRP5Q5T4F7 317 aa17.65■□□□□ 0.42
SFXN1-209ENST00000508290 FAM91A1Q658Y4 838 aa17.65■□□□□ 0.42
SFXN1-209ENST00000508290 CGB2Q6NT52 195 aa17.65■□□□□ 0.42
SFXN1-209ENST00000508290 PAMR1Q6UXH9 720 aa17.65■□□□□ 0.42
SFXN1-209ENST00000508290 ATG4DQ86TL0 474 aaPredicted RBP17.65■□□□□ 0.42
SFXN1-209ENST00000508290 ZNF100Q8IYN0 542 aa17.65■□□□□ 0.42
SFXN1-209ENST00000508290 RASSF5Q8WWW0 418 aa17.65■□□□□ 0.42
SFXN1-209ENST00000508290 KISS1RQ969F8 398 aaPredicted RBP17.65■□□□□ 0.42
SFXN1-209ENST00000508290 C3orf49Q96BT1 292 aa17.65■□□□□ 0.42
SFXN1-209ENST00000508290 ZNF317Q96PQ6 595 aaPredicted RBP17.65■□□□□ 0.42
SFXN1-209ENST00000508290 NGBQ9NPG2 151 aa17.65■□□□□ 0.42
SFXN1-209ENST00000508290 GID8Q9NWU2 228 aa17.65■□□□□ 0.42
SFXN1-209ENST00000508290 SLC9A8Q9Y2E8 581 aa17.65■□□□□ 0.42
SFXN1-209ENST00000508290 NOSIPQ9Y314 301 aaKnown RBP17.65■□□□□ 0.42
SFXN1-209ENST00000508290 CAPN7Q9Y6W3 813 aa17.65■□□□□ 0.42
SFXN1-209ENST00000508290 OTOGQ6ZRI0 2925 aa17.65■□□□□ 0.42
SFXN1-209ENST00000508290 TMEM229AB2RXF0 380 aa17.64■□□□□ 0.41
SFXN1-209ENST00000508290 CCDC22O60826 627 aa17.64■□□□□ 0.41
SFXN1-209ENST00000508290 GCM2O75603 506 aaPredicted RBP17.64■□□□□ 0.41
SFXN1-209ENST00000508290 IMPDH2P12268 514 aa17.64■□□□□ 0.41
SFXN1-209ENST00000508290 PRG2P13727 222 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms