RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 AGFG1P52594 562 aaKnown RBP4.73□□□□□ -1.65
HTT-202ENST00000502820 SSTP61278 116 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 LSM3P62310 102 aaKnown RBP4.73□□□□□ -1.65
HTT-202ENST00000502820 MAT1AQ00266 395 aaKnown RBP4.73□□□□□ -1.65
HTT-202ENST00000502820 MLLT11Q13015 90 aaPredicted RBP4.73□□□□□ -1.65
HTT-202ENST00000502820 ARHGAP19Q14CB8 494 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 AANATQ16613 207 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 TMEM44Q2T9K0 475 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 CHRFAM7AQ494W8 412 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.73□□□□□ -1.65
HTT-202ENST00000502820 PAGE3Q5JUK9 113 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 CDKL4Q5MAI5 379 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 TMEM201Q5SNT2 666 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 C6orf136Q5SQH8 315 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 NXNL2Q5VZ03 156 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 CLEC6AQ6EIG7 209 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 OR4F3Q6IEY1 312 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 ARHGAP11AQ6P4F7 1023 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 BHLHB9Q6PI77 547 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 TMEM65Q6PI78 240 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 FIGLAQ6QHK4 219 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 TMEM107Q6UX40 140 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 FAM131AQ6UXB0 335 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 BAIAP2L2Q6UXY1 529 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 GPRIN3Q6ZVF9 776 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 RNF44Q7L0R7 432 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 C16orf62Q7Z3J2 963 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 HSD17B13Q7Z5P4 300 aaPredicted RBP4.73□□□□□ -1.65
HTT-202ENST00000502820 COMMD7Q86VX2 200 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 SNX29P2Q8IUI4 249 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 SPNS2Q8IVW8 549 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 DENND6AQ8IWF6 608 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 ENTHD1Q8IYW4 607 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 ARHGEF39Q8N4T4 335 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 SLC5A8Q8N695 610 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 ATG16L2Q8NAA4 619 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 FBXO15Q8NCQ5 510 aaPredicted RBP4.73□□□□□ -1.65
HTT-202ENST00000502820 MDS2Q8NDY4 140 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 ZNF680Q8NEM1 530 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 OR2L3Q8NG85 312 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 OR52N2Q8NGI0 321 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 GPR151Q8TDV0 419 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 FAM222BQ8WU58 562 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 RBPMSQ93062 196 aaKnown RBP4.73□□□□□ -1.65
HTT-202ENST00000502820 RAD51AP1Q96B01 352 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 KCTD12Q96CX2 325 aaKnown RBP4.73□□□□□ -1.65
HTT-202ENST00000502820 SCMH1Q96GD3 660 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 ITCHQ96J02 903 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 ARL5BQ96KC2 179 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 C3orf30Q96M34 536 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 ATOH8Q96SQ7 321 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 MGLLQ99685 303 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 KCNJ15Q99712 375 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 TCEAL7Q9BRU2 100 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 GSX2Q9BZM3 304 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 SLC19A3Q9BZV2 496 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 DNTTIP1Q9H147 329 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 SLC26A1Q9H2B4 701 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 SMURF2Q9HAU4 748 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 LRTM1Q9HBL6 345 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 IFT46Q9NQC8 304 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 INTS7Q9NVH2 962 aaKnown RBP4.73□□□□□ -1.65
HTT-202ENST00000502820 CLN6Q9NWW5 311 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 IMPAD1Q9NX62 359 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 TAS2R13Q9NYV9 303 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 NUDT4Q9NZJ9 180 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 GMPR2Q9P2T1 348 aaKnown RBP4.73□□□□□ -1.65
HTT-202ENST00000502820 SNX6Q9UNH7 406 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 DIMT1Q9UNQ2 313 aaKnown RBP4.73□□□□□ -1.65
HTT-202ENST00000502820 GSTK1Q9Y2Q3 226 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 CRYL1Q9Y2S2 319 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 FIS1Q9Y3D6 152 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 ZGRF1Q86YA3 2104 aa4.73□□□□□ -1.65
HTT-202ENST00000502820 IGKV1-8A0A0C4DH67 115 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 LOC100506127A0A0U1RQW1 187 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 FAM240BA0A1B0GVZ2 78 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 hCG_1807616A0A1W2PRN6 198 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 SERTM1A2A2V5 107 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 MBD3L4A6NDZ8 208 aaPredicted RBP4.72□□□□□ -1.65
HTT-202ENST00000502820 OR2W5A6NFC9 320 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 FABP12A6NFH5 140 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 ANKDD1BA6NHY2 528 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 MBD3L5A6NJ08 208 aaPredicted RBP4.72□□□□□ -1.65
HTT-202ENST00000502820 MPTX1A8MV57 137 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 EEF1E1-BLOC1S5C9J1V9 151 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 RNF223E7ERA6 249 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 G3V3Y1 287 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 GFYI3L273 518 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 CLDN4O14493 209 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 RGS5O15539 181 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 EEF1E1O43324 174 aaKnown RBP4.72□□□□□ -1.65
HTT-202ENST00000502820 LYRM1O43325 122 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 GATCO43716 136 aaKnown RBP4.72□□□□□ -1.65
HTT-202ENST00000502820 SRPX2O60687 465 aaPredicted RBP4.72□□□□□ -1.65
HTT-202ENST00000502820 ZNF254O75437 659 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 PPM1BO75688 479 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 ATP6AP2O75787 350 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 IFNA14P01570 189 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 MT-ND1P03886 318 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 IFNA4P05014 189 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms