RNA–Protein interactions for RNA: ENST00000466159.6

SYNE1-217, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYNE1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-217ENST00000466159 G6PC3Q9BUM1 346 aa8.21□□□□□ -1.1
SYNE1-217ENST00000466159 RANGRFQ9HD47 186 aaPredicted RBP8.21□□□□□ -1.1
SYNE1-217ENST00000466159 MKKSQ9NPJ1 570 aaPredicted RBP8.21□□□□□ -1.1
SYNE1-217ENST00000466159 KLHL1Q9NR64 748 aa8.21□□□□□ -1.1
SYNE1-217ENST00000466159 ENAMQ9NRM1 1142 aa8.21□□□□□ -1.1
SYNE1-217ENST00000466159 RBFOX1Q9NWB1 397 aaKnown RBP8.21□□□□□ -1.1
SYNE1-217ENST00000466159 NLKQ9UBE8 527 aa8.21□□□□□ -1.1
SYNE1-217ENST00000466159 ADAM30Q9UKF2 790 aa8.21□□□□□ -1.1
SYNE1-217ENST00000466159 A0A087WUJ7 227 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 SERINC4A6NH21 518 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 SC5DO75845 299 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 NSA2O95478 260 aaKnown RBP8.2□□□□□ -1.1
SYNE1-217ENST00000466159 PROS1P07225 676 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 GUSBP08236 651 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 FAM157BP0CG42 384 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 PTBP1P26599 531 aaKnown RBP eCLIP8.2□□□□□ -1.1
SYNE1-217ENST00000466159 MAOBP27338 520 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 RPL4P36578 427 aaKnown RBP8.2□□□□□ -1.1
SYNE1-217ENST00000466159 CAPZBP47756 277 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 GFERP55789 205 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 FUT7Q11130 342 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 SLC25A35Q3KQZ1 300 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 PAMR1Q6UXH9 720 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 SYT9Q86SS6 491 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 SAMD12Q8N8I0 201 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 ZNF615Q8N8J6 731 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 OR4M1Q8NGD0 313 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 OR51Q1Q8NH59 317 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 ZPLD1Q8TCW7 415 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 SLC2A12Q8TD20 617 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 CLIP3Q96DZ5 547 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 TCTN2Q96GX1 697 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 NMNAT3Q96T66 252 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 TTYH2Q9BSA4 534 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 EVA1AQ9H8M9 152 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 ST6GALNAC2Q9UJ37 374 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 MAU2Q9Y6X3 613 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 EML5Q05BV3 1969 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 IGHV5-51A0A0C4DH38 117 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 A0A0G2JK05 382 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 FAM240BA0A1B0GVZ2 78 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 LANCL1O43813 399 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 CLPSP04118 112 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 PRKAR1AP10644 381 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 TFPIP10646 304 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 CD53P19397 219 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 GABRA4P48169 554 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 INPP1P49441 399 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 TAS2R43P59537 309 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 ACTC1P68032 377 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 ACTA1P68133 377 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 CD83Q01151 205 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 CCDC85BQ15834 202 aaPredicted RBP8.2□□□□□ -1.1
SYNE1-217ENST00000466159 TATDN3Q17R31 274 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 ZNF57Q68EA5 555 aaPredicted RBP8.2□□□□□ -1.1
SYNE1-217ENST00000466159 LYPD4Q6UWN0 246 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 PXKQ7Z7A4 578 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 ZNF321PQ8N8H1 164 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 ZSCAN1Q8NBB4 408 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 OR6C4Q8NGE1 309 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 LMX1AQ8TE12 382 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 UPRTQ96BW1 309 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 PELI1Q96FA3 418 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 TGM7Q96PF1 710 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 SLC38A3Q99624 504 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 SPRTNQ9H040 489 aaPredicted RBP8.2□□□□□ -1.1
SYNE1-217ENST00000466159 CYSLTR2Q9NS75 346 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 SOHLH2Q9NX45 425 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 BOLA1Q9Y3E2 137 aa8.2□□□□□ -1.1
SYNE1-217ENST00000466159 SDK1Q7Z5N4 2213 aa8.19□□□□□ -1.1
SYNE1-217ENST00000466159 C4orf47A7E2U8 309 aa8.19□□□□□ -1.1
SYNE1-217ENST00000466159 EFCAB7A8K855 629 aa8.19□□□□□ -1.1
SYNE1-217ENST00000466159 CENPXA8MT69 81 aa8.19□□□□□ -1.1
SYNE1-217ENST00000466159 CHURC1-FNTBB4DL54 471 aa8.19□□□□□ -1.1
SYNE1-217ENST00000466159 SERPINI2O75830 405 aa8.19□□□□□ -1.1
SYNE1-217ENST00000466159 TCEA1P23193 301 aaKnown RBP8.19□□□□□ -1.1
SYNE1-217ENST00000466159 FASLGP48023 281 aa8.19□□□□□ -1.1
SYNE1-217ENST00000466159 FNTBP49356 437 aa8.19□□□□□ -1.1
SYNE1-217ENST00000466159 GPR143P51810 404 aa8.19□□□□□ -1.1
SYNE1-217ENST00000466159 NRG3P56975 720 aa8.19□□□□□ -1.1
SYNE1-217ENST00000466159 ERVK-25P63136 954 aa8.19□□□□□ -1.1
SYNE1-217ENST00000466159 SKP1P63208 163 aa8.19□□□□□ -1.1
SYNE1-217ENST00000466159 POU4F2Q12837 409 aa8.19□□□□□ -1.1
SYNE1-217ENST00000466159 TRAM1Q15629 374 aa8.19□□□□□ -1.1
SYNE1-217ENST00000466159 MZT2BQ6NZ67 158 aa8.19□□□□□ -1.1
SYNE1-217ENST00000466159 MED25Q71SY5 747 aa8.19□□□□□ -1.1
SYNE1-217ENST00000466159 LRRC28Q86X40 367 aaPredicted RBP8.19□□□□□ -1.1
SYNE1-217ENST00000466159 NPEPL1Q8NDH3 523 aa8.19□□□□□ -1.1
SYNE1-217ENST00000466159 DUSP18Q8NEJ0 188 aa8.19□□□□□ -1.1
SYNE1-217ENST00000466159 C3orf49Q96BT1 292 aa8.19□□□□□ -1.1
SYNE1-217ENST00000466159 RASD2Q96D21 266 aa8.19□□□□□ -1.1
SYNE1-217ENST00000466159 ZC3HAV1LQ96H79 300 aaKnown RBP8.19□□□□□ -1.1
SYNE1-217ENST00000466159 UBL7Q96S82 380 aaPredicted RBP8.19□□□□□ -1.1
SYNE1-217ENST00000466159 OR2B2Q9GZK3 357 aa8.19□□□□□ -1.1
SYNE1-217ENST00000466159 HDHD2Q9H0R4 259 aa8.19□□□□□ -1.1
SYNE1-217ENST00000466159 ICAM5Q9UMF0 924 aa8.19□□□□□ -1.1
SYNE1-217ENST00000466159 OR6C68A6NDL8 312 aa8.19□□□□□ -1.1
SYNE1-217ENST00000466159 OIP5O43482 229 aa8.19□□□□□ -1.1
SYNE1-217ENST00000466159 SELENOFO60613 162 aa8.19□□□□□ -1.1
SYNE1-217ENST00000466159 TRAPPC2P0DI81 140 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms