RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 FAM91A1Q658Y4 838 aa17.83■□□□□ 0.44
COL9A3-202ENST00000452372 GTF2IRD2BQ6EKJ0 949 aa17.83■□□□□ 0.44
COL9A3-202ENST00000452372 GTF2IRD2Q86UP8 949 aa17.83■□□□□ 0.44
COL9A3-202ENST00000452372 LSMEM1Q8N8F7 131 aa17.83■□□□□ 0.44
COL9A3-202ENST00000452372 OR2T12Q8NG77 320 aa17.83■□□□□ 0.44
COL9A3-202ENST00000452372 ROBO4Q8WZ75 1007 aa17.83■□□□□ 0.44
COL9A3-202ENST00000452372 GLRX2Q9NS18 164 aa17.83■□□□□ 0.44
COL9A3-202ENST00000452372 MTORP42345 2549 aa17.82■□□□□ 0.44
COL9A3-202ENST00000452372 TMEM72A0PK05 275 aa17.82■□□□□ 0.44
COL9A3-202ENST00000452372 ELOVL7A1L3X0 281 aa17.82■□□□□ 0.44
COL9A3-202ENST00000452372 SULT2B1O00204 365 aa17.82■□□□□ 0.44
COL9A3-202ENST00000452372 CXCR1P25024 350 aa17.82■□□□□ 0.44
COL9A3-202ENST00000452372 DIO1P49895 249 aa17.82■□□□□ 0.44
COL9A3-202ENST00000452372 ASCL1P50553 236 aa17.82■□□□□ 0.44
COL9A3-202ENST00000452372 SLC7A2P52569 658 aa17.82■□□□□ 0.44
COL9A3-202ENST00000452372 RGS8P57771 180 aaPredicted RBP17.82■□□□□ 0.44
COL9A3-202ENST00000452372 CSNK2A1P68400 391 aaPredicted RBP17.82■□□□□ 0.44
COL9A3-202ENST00000452372 CNEP1R1Q8N9A8 125 aa17.82■□□□□ 0.44
COL9A3-202ENST00000452372 GPR32P1Q8NGA4 272 aa17.82■□□□□ 0.44
COL9A3-202ENST00000452372 SLC26A7Q8TE54 656 aa17.82■□□□□ 0.44
COL9A3-202ENST00000452372 RASSF5Q8WWW0 418 aa17.82■□□□□ 0.44
COL9A3-202ENST00000452372 C3orf49Q96BT1 292 aa17.82■□□□□ 0.44
COL9A3-202ENST00000452372 TAMM41Q96BW9 452 aa17.82■□□□□ 0.44
COL9A3-202ENST00000452372 DDIT4LQ96D03 193 aa17.82■□□□□ 0.44
COL9A3-202ENST00000452372 STARD4Q96DR4 205 aa17.82■□□□□ 0.44
COL9A3-202ENST00000452372 GMPPAQ96IJ6 420 aaPredicted RBP17.82■□□□□ 0.44
COL9A3-202ENST00000452372 ARL5BQ96KC2 179 aa17.82■□□□□ 0.44
COL9A3-202ENST00000452372 TRIM2Q9C040 744 aa17.82■□□□□ 0.44
COL9A3-202ENST00000452372 OR11A1Q9GZK7 315 aa17.82■□□□□ 0.44
COL9A3-202ENST00000452372 PIGMQ9H3S5 423 aa17.82■□□□□ 0.44
COL9A3-202ENST00000452372 MPDZO75970 2070 aa17.82■□□□□ 0.44
COL9A3-202ENST00000452372 MAP1AP78559 2803 aaPredicted RBP17.81■□□□□ 0.44
COL9A3-202ENST00000452372 NME4O00746 187 aa17.81■□□□□ 0.44
COL9A3-202ENST00000452372 NDUFAB1O14561 156 aa17.81■□□□□ 0.44
COL9A3-202ENST00000452372 CD247P20963 164 aa17.81■□□□□ 0.44
COL9A3-202ENST00000452372 CRYBA2P53672 197 aa17.81■□□□□ 0.44
COL9A3-202ENST00000452372 PSME3P61289 254 aa17.81■□□□□ 0.44
COL9A3-202ENST00000452372 LIPEQ05469 1076 aa17.81■□□□□ 0.44
COL9A3-202ENST00000452372 MYBPHQ13203 477 aa17.81■□□□□ 0.44
COL9A3-202ENST00000452372 FCRLAQ7L513 359 aa17.81■□□□□ 0.44
COL9A3-202ENST00000452372 FAM214BQ7L5A3 538 aa17.81■□□□□ 0.44
COL9A3-202ENST00000452372 DMRTC2Q8IXT2 367 aaPredicted RBP17.81■□□□□ 0.44
COL9A3-202ENST00000452372 MICU2Q8IYU8 434 aa17.81■□□□□ 0.44
COL9A3-202ENST00000452372 CCDC197Q8NCU1 140 aa17.81■□□□□ 0.44
COL9A3-202ENST00000452372 OR52E4Q8NGH9 312 aa17.81■□□□□ 0.44
COL9A3-202ENST00000452372 RNF128Q8TEB7 428 aa17.81■□□□□ 0.44
COL9A3-202ENST00000452372 LRRC46Q96FV0 321 aa17.81■□□□□ 0.44
COL9A3-202ENST00000452372 ARHGDIGQ99819 225 aa17.81■□□□□ 0.44
COL9A3-202ENST00000452372 WFDC6Q9BQY6 131 aa17.81■□□□□ 0.44
COL9A3-202ENST00000452372 ZNF559Q9BR84 538 aa17.81■□□□□ 0.44
COL9A3-202ENST00000452372 ARL8BQ9NVJ2 186 aa17.81■□□□□ 0.44
COL9A3-202ENST00000452372 TESQ9UGI8 421 aaKnown RBP17.81■□□□□ 0.44
COL9A3-202ENST00000452372 TAGLN3Q9UI15 199 aa17.81■□□□□ 0.44
COL9A3-202ENST00000452372 PACSIN3Q9UKS6 424 aa17.81■□□□□ 0.44
COL9A3-202ENST00000452372 TRAPPC4Q9Y296 219 aa17.81■□□□□ 0.44
COL9A3-202ENST00000452372 C2CD3Q4AC94 2353 aa17.8■□□□□ 0.44
COL9A3-202ENST00000452372 TPST2O60704 377 aa17.8■□□□□ 0.44
COL9A3-202ENST00000452372 SS18L1O75177 396 aaPredicted RBP17.8■□□□□ 0.44
COL9A3-202ENST00000452372 PRKD3O94806 890 aa17.8■□□□□ 0.44
COL9A3-202ENST00000452372 PMS2P2O95744 297 aa17.8■□□□□ 0.44
COL9A3-202ENST00000452372 PLGP00747 810 aaPredicted RBP17.8■□□□□ 0.44
COL9A3-202ENST00000452372 FESP07332 822 aa17.8■□□□□ 0.44
COL9A3-202ENST00000452372 ENPP1P22413 925 aa17.8■□□□□ 0.44
COL9A3-202ENST00000452372 HTR2AP28223 471 aa17.8■□□□□ 0.44
COL9A3-202ENST00000452372 RNPS1Q15287 305 aaKnown RBP17.8■□□□□ 0.44
COL9A3-202ENST00000452372 NRF1Q16656 503 aa17.8■□□□□ 0.44
COL9A3-202ENST00000452372 VWA1Q6PCB0 445 aa17.8■□□□□ 0.44
COL9A3-202ENST00000452372 BTLAQ7Z6A9 289 aa17.8■□□□□ 0.44
COL9A3-202ENST00000452372 ATG4DQ86TL0 474 aaPredicted RBP17.8■□□□□ 0.44
COL9A3-202ENST00000452372 SLC43A2Q8N370 569 aa17.8■□□□□ 0.44
COL9A3-202ENST00000452372 FITM2Q8N6M3 262 aa17.8■□□□□ 0.44
COL9A3-202ENST00000452372 RNASE6Q93091 150 aaKnown RBP17.8■□□□□ 0.44
COL9A3-202ENST00000452372 PRR14Q9BWN1 585 aa17.8■□□□□ 0.44
COL9A3-202ENST00000452372 POTEKPQ9BYX7 375 aa17.8■□□□□ 0.44
COL9A3-202ENST00000452372 C12orf10Q9HB07 376 aa17.8■□□□□ 0.44
COL9A3-202ENST00000452372 GP6Q9HCN6 339 aa17.8■□□□□ 0.44
COL9A3-202ENST00000452372 TMEM181Q9P2C4 612 aa17.8■□□□□ 0.44
COL9A3-202ENST00000452372 ABCD2Q9UBJ2 740 aa17.8■□□□□ 0.44
COL9A3-202ENST00000452372 RPS6KB2Q9UBS0 482 aa17.8■□□□□ 0.44
COL9A3-202ENST00000452372 FOXD3Q9UJU5 478 aaPredicted RBP17.8■□□□□ 0.44
COL9A3-202ENST00000452372 ITGB1BP2Q9UKP3 347 aa17.8■□□□□ 0.44
COL9A3-202ENST00000452372 ZC3H12DA2A288 527 aaKnown RBP17.79■□□□□ 0.44
COL9A3-202ENST00000452372 A8MXE2 369 aa17.79■□□□□ 0.44
COL9A3-202ENST00000452372 EEF1E1-BLOC1S5C9J1V9 151 aa17.79■□□□□ 0.44
COL9A3-202ENST00000452372 MSTNO14793 375 aa17.79■□□□□ 0.44
COL9A3-202ENST00000452372 SMAD9O15198 467 aaKnown RBP17.79■□□□□ 0.44
COL9A3-202ENST00000452372 EEF1E1O43324 174 aaKnown RBP17.79■□□□□ 0.44
COL9A3-202ENST00000452372 DNPH1O43598 174 aa17.79■□□□□ 0.44
COL9A3-202ENST00000452372 CGAP01215 116 aa17.79■□□□□ 0.44
COL9A3-202ENST00000452372 IFNA14P01570 189 aa17.79■□□□□ 0.44
COL9A3-202ENST00000452372 KDELR2P33947 212 aa17.79■□□□□ 0.44
COL9A3-202ENST00000452372 CPA2P48052 419 aa17.79■□□□□ 0.44
COL9A3-202ENST00000452372 NCALDP61601 193 aa17.79■□□□□ 0.44
COL9A3-202ENST00000452372 SIRPAP78324 504 aa17.79■□□□□ 0.44
COL9A3-202ENST00000452372 KRT72Q14CN4 511 aa17.79■□□□□ 0.44
COL9A3-202ENST00000452372 RANBP3LQ86VV4 465 aaPredicted RBP17.79■□□□□ 0.44
COL9A3-202ENST00000452372 ABHD3Q8WU67 409 aa17.79■□□□□ 0.44
COL9A3-202ENST00000452372 DNAJA4Q8WW22 397 aaPredicted RBP17.79■□□□□ 0.44
COL9A3-202ENST00000452372 ALG2Q9H553 416 aa17.79■□□□□ 0.44
COL9A3-202ENST00000452372 TMEM27Q9HBJ8 222 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms