RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 PLOD3O60568 738 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 GUCY1B2O75343 617 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 PRKRAO75569 313 aaKnown RBP4.97□□□□□ -1.61
C9orf3-205ENST00000427193 SCRG1O75711 98 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 MYO1DO94832 1006 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 GPR75O95800 540 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 C1QCP02747 245 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 IGKV3-11P04433 115 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 ATP1B1P05026 303 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 EIF2S1P05198 315 aaKnown RBP4.97□□□□□ -1.61
C9orf3-205ENST00000427193 SERPIND1P05546 499 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 RNH1P13489 461 aaKnown RBP4.97□□□□□ -1.61
C9orf3-205ENST00000427193 ZNF10P21506 573 aaPredicted RBP4.97□□□□□ -1.61
C9orf3-205ENST00000427193 CALB2P22676 271 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 RPL3P39023 403 aaKnown RBP4.97□□□□□ -1.61
C9orf3-205ENST00000427193 OR1D4P47884 311 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 TRPC1P48995 793 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 GZMMP51124 257 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 RAP1GDS1P52306 607 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 NCALDP61601 193 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 SKP1P63208 163 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 HBA1P69905 142 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 OLR1P78380 273 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 DCDP81605 110 aaKnown RBP4.97□□□□□ -1.61
C9orf3-205ENST00000427193 MAT1AQ00266 395 aaKnown RBP4.97□□□□□ -1.61
C9orf3-205ENST00000427193 C2orf80Q0P641 193 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 LRRC74AQ0VAA2 488 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 KLRB1Q12918 225 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 SYT16Q17RD7 645 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 AGKQ53H12 422 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 OR4F3Q6IEY1 312 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 OR52E8Q6IFG1 317 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 CYB5D1Q6P9G0 228 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 TMEM205Q6UW68 189 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 CEACAM20Q6UY09 585 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 TMEM64Q6YI46 380 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 QSOX2Q6ZRP7 698 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 RNF144BQ7Z419 303 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 R3HCC1LQ7Z5L2 792 aaKnown RBP4.97□□□□□ -1.61
C9orf3-205ENST00000427193 SNX32Q86XE0 403 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 TTC29Q8NA56 475 aaPredicted RBP4.97□□□□□ -1.61
C9orf3-205ENST00000427193 RBM15BQ8NDT2 890 aaKnown RBP4.97□□□□□ -1.61
C9orf3-205ENST00000427193 OR51Q1Q8NH59 317 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 CLHC1Q8NHS4 586 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 ZCCHC10Q8TBK6 192 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 ZNF675Q8TD23 568 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.97□□□□□ -1.61
C9orf3-205ENST00000427193 TANKQ92844 425 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 CMTM5Q96DZ9 223 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 GIMAP5Q96F15 307 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 NSL1Q96IY1 281 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 ADGRG7Q96K78 797 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 AMDHD1Q96NU7 426 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 CADM1Q9BY67 442 aaKnown RBP4.97□□□□□ -1.61
C9orf3-205ENST00000427193 DPY30Q9C005 99 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 STRADBQ9C0K7 418 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 PAIP1Q9H074 479 aaKnown RBP4.97□□□□□ -1.61
C9orf3-205ENST00000427193 LRMDAQ9H2I8 198 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 IKZF5Q9H5V7 419 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 RPF2Q9H7B2 306 aaKnown RBP4.97□□□□□ -1.61
C9orf3-205ENST00000427193 FANCEQ9HB96 536 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 MKKSQ9NPJ1 570 aaPredicted RBP4.97□□□□□ -1.61
C9orf3-205ENST00000427193 SLC35C2Q9NQQ7 365 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 FAM120CQ9NX05 1096 aaKnown RBP4.97□□□□□ -1.61
C9orf3-205ENST00000427193 SLC39A1Q9NY26 324 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 CCDC167Q9P0B6 97 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 TAGLN3Q9UI15 199 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 FBXO9Q9UK97 447 aaPredicted RBP4.97□□□□□ -1.61
C9orf3-205ENST00000427193 CDC14AQ9UNH5 594 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 MMACHCQ9Y4U1 282 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 CSPG4Q6UVK1 2322 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 PKDREJQ9NTG1 2253 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 SHANK1Q9Y566 2161 aa4.97□□□□□ -1.61
C9orf3-205ENST00000427193 NUP214P35658 2090 aaPredicted RBP4.96□□□□□ -1.61
C9orf3-205ENST00000427193 CNTRLQ7Z7A1 2325 aa4.96□□□□□ -1.61
C9orf3-205ENST00000427193 A0A087WV62 115 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 A0A096LPI6 279 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 LOC100653049A0A140TA62 436 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 BMPR1BO00238 502 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 EBAG9O00559 213 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 CFLARO15519 480 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 HNRNPRO43390 633 aaKnown RBP4.96□□□□□ -1.62
C9orf3-205ENST00000427193 HNRNPCL1O60812 293 aaKnown RBP4.96□□□□□ -1.62
C9orf3-205ENST00000427193 JRKO75564 520 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 KRT34O76011 436 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 KIAA0754O94854 1291 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 LRATO95237 230 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 CLPSP04118 112 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 RAB40ALP0C0E4 278 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 SLC35E2P0CK97 266 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 CPMP14384 443 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 GPX2P18283 190 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 CD82P27701 267 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 HPCAL1P37235 193 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 CDKN2CP42773 168 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 MAGEA8P43361 318 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 XCR1P46094 333 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 MLLT10P55197 1068 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 NME5P56597 212 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 STX1BP61266 288 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms