RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 KIR2DL2P43627 348 aaPredicted RBP16.67■□□□□ 0.26
PTCD3-204ENST00000418628 DIO1P49895 249 aa16.67■□□□□ 0.26
PTCD3-204ENST00000418628 MYBPHQ13203 477 aa16.67■□□□□ 0.26
PTCD3-204ENST00000418628 ABLIM2Q6H8Q1 611 aa16.67■□□□□ 0.26
PTCD3-204ENST00000418628 TSPYL5Q86VY4 417 aaPredicted RBP16.67■□□□□ 0.26
PTCD3-204ENST00000418628 CADM2Q8N3J6 435 aa16.67■□□□□ 0.26
PTCD3-204ENST00000418628 ATP6V1C2Q8NEY4 427 aa16.67■□□□□ 0.26
PTCD3-204ENST00000418628 OR6T1Q8NGN1 323 aa16.67■□□□□ 0.26
PTCD3-204ENST00000418628 OR5B2Q96R09 309 aa16.67■□□□□ 0.26
PTCD3-204ENST00000418628 ZNF559Q9BR84 538 aa16.67■□□□□ 0.26
PTCD3-204ENST00000418628 TRIM2Q9C040 744 aa16.67■□□□□ 0.26
PTCD3-204ENST00000418628 ING1Q9UK53 422 aaPredicted RBP16.67■□□□□ 0.26
PTCD3-204ENST00000418628 DCHS2Q6V1P9 2916 aa16.66■□□□□ 0.26
PTCD3-204ENST00000418628 ITPR2Q14571 2701 aa16.66■□□□□ 0.26
PTCD3-204ENST00000418628 PRSS44E7EML9 344 aa16.66■□□□□ 0.26
PTCD3-204ENST00000418628 SS18L1O75177 396 aaPredicted RBP16.66■□□□□ 0.26
PTCD3-204ENST00000418628 IMPDH2P12268 514 aa16.66■□□□□ 0.26
PTCD3-204ENST00000418628 HSD17B1P14061 328 aa16.66■□□□□ 0.26
PTCD3-204ENST00000418628 KLK2P20151 261 aa16.66■□□□□ 0.26
PTCD3-204ENST00000418628 BMP5P22003 454 aa16.66■□□□□ 0.26
PTCD3-204ENST00000418628 SLC25A3Q00325 362 aa16.66■□□□□ 0.26
PTCD3-204ENST00000418628 EGR4Q05215 589 aa16.66■□□□□ 0.26
PTCD3-204ENST00000418628 SWT1Q5T5J6 900 aaKnown RBP16.66■□□□□ 0.26
PTCD3-204ENST00000418628 EEF1A1P5Q5VTE0 462 aa16.66■□□□□ 0.26
PTCD3-204ENST00000418628 P4HA3Q7Z4N8 544 aa16.66■□□□□ 0.26
PTCD3-204ENST00000418628 OR52E4Q8NGH9 312 aa16.66■□□□□ 0.26
PTCD3-204ENST00000418628 DDIT4LQ96D03 193 aa16.66■□□□□ 0.26
PTCD3-204ENST00000418628 GMPPAQ96IJ6 420 aaPredicted RBP16.66■□□□□ 0.26
PTCD3-204ENST00000418628 PRR14Q9BWN1 585 aa16.66■□□□□ 0.26
PTCD3-204ENST00000418628 POTEKPQ9BYX7 375 aa16.66■□□□□ 0.26
PTCD3-204ENST00000418628 ENKD1Q9H0I2 346 aa16.66■□□□□ 0.26
PTCD3-204ENST00000418628 GP6Q9HCN6 339 aa16.66■□□□□ 0.26
PTCD3-204ENST00000418628 TIGARQ9NQ88 270 aa16.66■□□□□ 0.26
PTCD3-204ENST00000418628 CD300AQ9UGN4 299 aa16.66■□□□□ 0.26
PTCD3-204ENST00000418628 TRAPPC4Q9Y296 219 aa16.66■□□□□ 0.26
PTCD3-204ENST00000418628 CXCR6O00574 342 aa16.65■□□□□ 0.26
PTCD3-204ENST00000418628 LYPD3O95274 346 aa16.65■□□□□ 0.26
PTCD3-204ENST00000418628 SYNGR4O95473 234 aa16.65■□□□□ 0.26
PTCD3-204ENST00000418628 CGAP01215 116 aa16.65■□□□□ 0.26
PTCD3-204ENST00000418628 GGT1P19440 569 aa16.65■□□□□ 0.26
PTCD3-204ENST00000418628 ASCL1P50553 236 aa16.65■□□□□ 0.26
PTCD3-204ENST00000418628 AGFG1P52594 562 aaKnown RBP16.65■□□□□ 0.26
PTCD3-204ENST00000418628 CSNK2A1P68400 391 aaPredicted RBP16.65■□□□□ 0.26
PTCD3-204ENST00000418628 H3F3AP84243 136 aa16.65■□□□□ 0.26
PTCD3-204ENST00000418628 CYBRD1Q53TN4 286 aa16.65■□□□□ 0.26
PTCD3-204ENST00000418628 VWA1Q6PCB0 445 aa16.65■□□□□ 0.26
PTCD3-204ENST00000418628 FCRLAQ7L513 359 aa16.65■□□□□ 0.26
PTCD3-204ENST00000418628 RANBP3LQ86VV4 465 aaPredicted RBP16.65■□□□□ 0.26
PTCD3-204ENST00000418628 RBM45Q8IUH3 476 aaKnown RBP16.65■□□□□ 0.26
PTCD3-204ENST00000418628 STK35Q8TDR2 534 aa16.65■□□□□ 0.26
PTCD3-204ENST00000418628 ABHD3Q8WU67 409 aa16.65■□□□□ 0.26
PTCD3-204ENST00000418628 DNAJA4Q8WW22 397 aaPredicted RBP16.65■□□□□ 0.26
PTCD3-204ENST00000418628 SLC38A4Q969I6 547 aa16.65■□□□□ 0.26
PTCD3-204ENST00000418628 STARD4Q96DR4 205 aa16.65■□□□□ 0.26
PTCD3-204ENST00000418628 KCTD14Q9BQ13 255 aaPredicted RBP16.65■□□□□ 0.26
PTCD3-204ENST00000418628 KCNJ16Q9NPI9 418 aa16.65■□□□□ 0.26
PTCD3-204ENST00000418628 GLRX2Q9NS18 164 aa16.65■□□□□ 0.26
PTCD3-204ENST00000418628 NDE1Q9NXR1 346 aa16.65■□□□□ 0.26
PTCD3-204ENST00000418628 SLC13A4Q9UKG4 626 aa16.65■□□□□ 0.26
PTCD3-204ENST00000418628 BAG5Q9UL15 447 aa16.65■□□□□ 0.26
PTCD3-204ENST00000418628 IGKV1D-42A0A075B6H8 117 aa16.64■□□□□ 0.25
PTCD3-204ENST00000418628 A8MVM7 634 aa16.64■□□□□ 0.25
PTCD3-204ENST00000418628 SULT2B1O00204 365 aa16.64■□□□□ 0.25
PTCD3-204ENST00000418628 CYTIPO60759 359 aa16.64■□□□□ 0.25
PTCD3-204ENST00000418628 IFNA14P01570 189 aa16.64■□□□□ 0.25
PTCD3-204ENST00000418628 THY1P04216 161 aa16.64■□□□□ 0.25
PTCD3-204ENST00000418628 ENPP1P22413 925 aa16.64■□□□□ 0.25
PTCD3-204ENST00000418628 CALB2P22676 271 aa16.64■□□□□ 0.25
PTCD3-204ENST00000418628 CXCR1P25024 350 aa16.64■□□□□ 0.25
PTCD3-204ENST00000418628 MNAT1P51948 309 aa16.64■□□□□ 0.25
PTCD3-204ENST00000418628 NCALDP61601 193 aa16.64■□□□□ 0.25
PTCD3-204ENST00000418628 BNIP2Q12982 314 aa16.64■□□□□ 0.25
PTCD3-204ENST00000418628 RNPS1Q15287 305 aaKnown RBP16.64■□□□□ 0.25
PTCD3-204ENST00000418628 OR1Q1Q15612 314 aa16.64■□□□□ 0.25
PTCD3-204ENST00000418628 SPATS1Q496A3 300 aa16.64■□□□□ 0.25
PTCD3-204ENST00000418628 LRRC23Q53EV4 343 aaPredicted RBP16.64■□□□□ 0.25
PTCD3-204ENST00000418628 ZNF613Q6PF04 617 aa16.64■□□□□ 0.25
PTCD3-204ENST00000418628 ULK3Q6PHR2 472 aa16.64■□□□□ 0.25
PTCD3-204ENST00000418628 LINC00114Q6XXX2 140 aa16.64■□□□□ 0.25
PTCD3-204ENST00000418628 FAM214BQ7L5A3 538 aa16.64■□□□□ 0.25
PTCD3-204ENST00000418628 TRPM8Q7Z2W7 1104 aa16.64■□□□□ 0.25
PTCD3-204ENST00000418628 SLC43A2Q8N370 569 aa16.64■□□□□ 0.25
PTCD3-204ENST00000418628 RBM15BQ8NDT2 890 aaKnown RBP16.64■□□□□ 0.25
PTCD3-204ENST00000418628 SLC26A7Q8TE54 656 aa16.64■□□□□ 0.25
PTCD3-204ENST00000418628 ROBO4Q8WZ75 1007 aa16.64■□□□□ 0.25
PTCD3-204ENST00000418628 NSL1Q96IY1 281 aa16.64■□□□□ 0.25
PTCD3-204ENST00000418628 PSD2Q9BQI7 771 aa16.64■□□□□ 0.25
PTCD3-204ENST00000418628 PTDSS2Q9BVG9 487 aa16.64■□□□□ 0.25
PTCD3-204ENST00000418628 PIGMQ9H3S5 423 aa16.64■□□□□ 0.25
PTCD3-204ENST00000418628 BCO1Q9HAY6 547 aa16.64■□□□□ 0.25
PTCD3-204ENST00000418628 CHST11Q9NPF2 352 aa16.64■□□□□ 0.25
PTCD3-204ENST00000418628 PACSIN3Q9UKS6 424 aa16.64■□□□□ 0.25
PTCD3-204ENST00000418628 ABCA4P78363 2273 aa16.64■□□□□ 0.25
PTCD3-204ENST00000418628 ABCA12Q86UK0 2595 aa16.64■□□□□ 0.25
PTCD3-204ENST00000418628 A0A087WUJ7 227 aa16.63■□□□□ 0.25
PTCD3-204ENST00000418628 LIPT2A6NK58 231 aa16.63■□□□□ 0.25
PTCD3-204ENST00000418628 ZNF814B7Z6K7 855 aa16.63■□□□□ 0.25
PTCD3-204ENST00000418628 FTCDNL1E5RQL4 147 aa16.63■□□□□ 0.25
PTCD3-204ENST00000418628 TFPIP10646 304 aa16.63■□□□□ 0.25
PTCD3-204ENST00000418628 CD8BP10966 210 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms