RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 COPZ1P61923 177 aa11.76□□□□□ -0.53
HDAC8-210ENST00000412342 SP5Q6BEB4 398 aaPredicted RBP11.76□□□□□ -0.53
HDAC8-210ENST00000412342 OR6T1Q8NGN1 323 aa11.76□□□□□ -0.53
HDAC8-210ENST00000412342 ABHD3Q8WU67 409 aa11.76□□□□□ -0.53
HDAC8-210ENST00000412342 GMPPAQ96IJ6 420 aaPredicted RBP11.76□□□□□ -0.53
HDAC8-210ENST00000412342 ALG2Q9H553 416 aa11.76□□□□□ -0.53
HDAC8-210ENST00000412342 C12orf10Q9HB07 376 aa11.76□□□□□ -0.53
HDAC8-210ENST00000412342 CHST11Q9NPF2 352 aa11.76□□□□□ -0.53
HDAC8-210ENST00000412342 HDGFL3Q9Y3E1 203 aa11.76□□□□□ -0.53
HDAC8-210ENST00000412342 IGHV3-15A0A0B4J1V0 119 aa11.75□□□□□ -0.53
HDAC8-210ENST00000412342 A0A0B4J2E0 115 aa11.75□□□□□ -0.53
HDAC8-210ENST00000412342 A0A1B0GX12 115 aa11.75□□□□□ -0.53
HDAC8-210ENST00000412342 ZNF814B7Z6K7 855 aa11.75□□□□□ -0.53
HDAC8-210ENST00000412342 DNPH1O43598 174 aa11.75□□□□□ -0.53
HDAC8-210ENST00000412342 FMO6PO60774 539 aa11.75□□□□□ -0.53
HDAC8-210ENST00000412342 FZD7O75084 574 aa11.75□□□□□ -0.53
HDAC8-210ENST00000412342 H3F3AP84243 136 aa11.75□□□□□ -0.53
HDAC8-210ENST00000412342 EGR4Q05215 589 aa11.75□□□□□ -0.53
HDAC8-210ENST00000412342 BNIP2Q12982 314 aa11.75□□□□□ -0.53
HDAC8-210ENST00000412342 FXNQ16595 210 aa11.75□□□□□ -0.53
HDAC8-210ENST00000412342 EEF1A1P5Q5VTE0 462 aa11.75□□□□□ -0.53
HDAC8-210ENST00000412342 ZNF787Q6DD87 383 aa11.75□□□□□ -0.53
HDAC8-210ENST00000412342 ABLIM2Q6H8Q1 611 aa11.75□□□□□ -0.53
HDAC8-210ENST00000412342 FCRLAQ7L513 359 aa11.75□□□□□ -0.53
HDAC8-210ENST00000412342 FAM214BQ7L5A3 538 aa11.75□□□□□ -0.53
HDAC8-210ENST00000412342 BTLAQ7Z6A9 289 aa11.75□□□□□ -0.53
HDAC8-210ENST00000412342 RBM45Q8IUH3 476 aaKnown RBP11.75□□□□□ -0.53
HDAC8-210ENST00000412342 OR52E4Q8NGH9 312 aa11.75□□□□□ -0.53
HDAC8-210ENST00000412342 DNAJA3Q96EY1 480 aa11.75□□□□□ -0.53
HDAC8-210ENST00000412342 PSD2Q9BQI7 771 aa11.75□□□□□ -0.53
HDAC8-210ENST00000412342 ZNF559Q9BR84 538 aa11.75□□□□□ -0.53
HDAC8-210ENST00000412342 POTEKPQ9BYX7 375 aa11.75□□□□□ -0.53
HDAC8-210ENST00000412342 TRIM2Q9C040 744 aa11.75□□□□□ -0.53
HDAC8-210ENST00000412342 PCDHAC1Q9H158 963 aa11.75□□□□□ -0.53
HDAC8-210ENST00000412342 SPAG4Q9NPE6 437 aa11.75□□□□□ -0.53
HDAC8-210ENST00000412342 TIGARQ9NQ88 270 aa11.75□□□□□ -0.53
HDAC8-210ENST00000412342 KLHL28Q9NXS3 571 aa11.75□□□□□ -0.53
HDAC8-210ENST00000412342 PACSIN3Q9UKS6 424 aa11.75□□□□□ -0.53
HDAC8-210ENST00000412342 CLEC4AQ9UMR7 237 aa11.75□□□□□ -0.53
HDAC8-210ENST00000412342 TRAPPC4Q9Y296 219 aa11.75□□□□□ -0.53
HDAC8-210ENST00000412342 IGKV1D-42A0A075B6H8 117 aa11.74□□□□□ -0.53
HDAC8-210ENST00000412342 CYSRT1A8MQ03 144 aa11.74□□□□□ -0.53
HDAC8-210ENST00000412342 A8MXE2 369 aa11.74□□□□□ -0.53
HDAC8-210ENST00000412342 SULT2B1O00204 365 aa11.74□□□□□ -0.53
HDAC8-210ENST00000412342 NDUFAB1O14561 156 aa11.74□□□□□ -0.53
HDAC8-210ENST00000412342 CYTIPO60759 359 aa11.74□□□□□ -0.53
HDAC8-210ENST00000412342 LYPD3O95274 346 aa11.74□□□□□ -0.53
HDAC8-210ENST00000412342 THY1P04216 161 aa11.74□□□□□ -0.53
HDAC8-210ENST00000412342 T-ENOLP0DO92 83 aa11.74□□□□□ -0.53
HDAC8-210ENST00000412342 TFPIP10646 304 aa11.74□□□□□ -0.53
HDAC8-210ENST00000412342 CD8BP10966 210 aa11.74□□□□□ -0.53
HDAC8-210ENST00000412342 CXCR1P25024 350 aa11.74□□□□□ -0.53
HDAC8-210ENST00000412342 AGTR1P30556 359 aa11.74□□□□□ -0.53
HDAC8-210ENST00000412342 CPOXP36551 454 aa11.74□□□□□ -0.53
HDAC8-210ENST00000412342 CSNK2A1P68400 391 aaPredicted RBP11.74□□□□□ -0.53
HDAC8-210ENST00000412342 SIRPAP78324 504 aa11.74□□□□□ -0.53
HDAC8-210ENST00000412342 SLC25A3Q00325 362 aa11.74□□□□□ -0.53
HDAC8-210ENST00000412342 OR1Q1Q15612 314 aa11.74□□□□□ -0.53
HDAC8-210ENST00000412342 CYBRD1Q53TN4 286 aa11.74□□□□□ -0.53
HDAC8-210ENST00000412342 PPP4R4Q6NUP7 873 aa11.74□□□□□ -0.53
HDAC8-210ENST00000412342 PGAM4Q8N0Y7 254 aa11.74□□□□□ -0.53
HDAC8-210ENST00000412342 CNEP1R1Q8N9A8 125 aa11.74□□□□□ -0.53
HDAC8-210ENST00000412342 RASSF5Q8WWW0 418 aa11.74□□□□□ -0.53
HDAC8-210ENST00000412342 RNASE6Q93091 150 aaKnown RBP11.74□□□□□ -0.53
HDAC8-210ENST00000412342 SLC38A4Q969I6 547 aa11.74□□□□□ -0.53
HDAC8-210ENST00000412342 DDIT4LQ96D03 193 aa11.74□□□□□ -0.53
HDAC8-210ENST00000412342 SPOCK3Q9BQ16 436 aa11.74□□□□□ -0.53
HDAC8-210ENST00000412342 PTDSS2Q9BVG9 487 aa11.74□□□□□ -0.53
HDAC8-210ENST00000412342 PRRG4Q9BZD6 226 aa11.74□□□□□ -0.53
HDAC8-210ENST00000412342 PIGMQ9H3S5 423 aa11.74□□□□□ -0.53
HDAC8-210ENST00000412342 BCO1Q9HAY6 547 aa11.74□□□□□ -0.53
HDAC8-210ENST00000412342 GP6Q9HCN6 339 aa11.74□□□□□ -0.53
HDAC8-210ENST00000412342 GLRX2Q9NS18 164 aa11.74□□□□□ -0.53
HDAC8-210ENST00000412342 KLHL13Q9P2N7 655 aa11.74□□□□□ -0.53
HDAC8-210ENST00000412342 SLC13A4Q9UKG4 626 aa11.74□□□□□ -0.53
HDAC8-210ENST00000412342 CRYBG3Q68DQ2 2970 aa11.74□□□□□ -0.53
HDAC8-210ENST00000412342 PKDREJQ9NTG1 2253 aa11.74□□□□□ -0.53
HDAC8-210ENST00000412342 LIPT2A6NK58 231 aa11.73□□□□□ -0.53
HDAC8-210ENST00000412342 ZNF716A6NP11 495 aa11.73□□□□□ -0.53
HDAC8-210ENST00000412342 A8MVM7 634 aa11.73□□□□□ -0.53
HDAC8-210ENST00000412342 EEF1E1-BLOC1S5C9J1V9 151 aa11.73□□□□□ -0.53
HDAC8-210ENST00000412342 FTCDNL1E5RQL4 147 aa11.73□□□□□ -0.53
HDAC8-210ENST00000412342 CXCR6O00574 342 aa11.73□□□□□ -0.53
HDAC8-210ENST00000412342 MSTNO14793 375 aa11.73□□□□□ -0.53
HDAC8-210ENST00000412342 EEF1E1O43324 174 aaKnown RBP11.73□□□□□ -0.53
HDAC8-210ENST00000412342 RAMP1O60894 148 aa11.73□□□□□ -0.53
HDAC8-210ENST00000412342 GGT1P19440 569 aa11.73□□□□□ -0.53
HDAC8-210ENST00000412342 TNFRSF1BP20333 461 aa11.73□□□□□ -0.53
HDAC8-210ENST00000412342 RNPS1Q15287 305 aaKnown RBP11.73□□□□□ -0.53
HDAC8-210ENST00000412342 LRRC23Q53EV4 343 aaPredicted RBP11.73□□□□□ -0.53
HDAC8-210ENST00000412342 ALG10BQ5I7T1 473 aa11.73□□□□□ -0.53
HDAC8-210ENST00000412342 ZNF613Q6PF04 617 aa11.73□□□□□ -0.53
HDAC8-210ENST00000412342 ULK3Q6PHR2 472 aa11.73□□□□□ -0.53
HDAC8-210ENST00000412342 ZNF474Q6S9Z5 364 aaPredicted RBP11.73□□□□□ -0.53
HDAC8-210ENST00000412342 LINC00114Q6XXX2 140 aa11.73□□□□□ -0.53
HDAC8-210ENST00000412342 RANBP3LQ86VV4 465 aaPredicted RBP11.73□□□□□ -0.53
HDAC8-210ENST00000412342 DMRTC2Q8IXT2 367 aaPredicted RBP11.73□□□□□ -0.53
HDAC8-210ENST00000412342 SLC43A2Q8N370 569 aa11.73□□□□□ -0.53
HDAC8-210ENST00000412342 OR6K3Q8NGY3 331 aa11.73□□□□□ -0.53
HDAC8-210ENST00000412342 VANGL1Q8TAA9 524 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms