RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 E2F1Q01094 437 aa12.36□□□□□ -0.43
COL6A2-204ENST00000409416 RPL6Q02878 288 aaKnown RBP12.36□□□□□ -0.43
COL6A2-204ENST00000409416 GRPEL2Q8TAA5 225 aa12.36□□□□□ -0.43
COL6A2-204ENST00000409416 HCAR2Q8TDS4 363 aa12.36□□□□□ -0.43
COL6A2-204ENST00000409416 COX14Q96I36 57 aa12.36□□□□□ -0.43
COL6A2-204ENST00000409416 DGAT2Q96PD7 388 aa12.36□□□□□ -0.43
COL6A2-204ENST00000409416 THAP7Q9BT49 309 aaPredicted RBP12.36□□□□□ -0.43
COL6A2-204ENST00000409416 KRCC1Q9NPI7 259 aaPredicted RBP12.36□□□□□ -0.43
COL6A2-204ENST00000409416 CXorf51AA0A1B0GTR3 108 aa12.36□□□□□ -0.43
COL6A2-204ENST00000409416 EIF4EP06730 217 aaKnown RBP12.36□□□□□ -0.43
COL6A2-204ENST00000409416 GLULP15104 373 aa12.36□□□□□ -0.43
COL6A2-204ENST00000409416 STAT5AP42229 794 aa12.36□□□□□ -0.43
COL6A2-204ENST00000409416 ZP2Q05996 745 aa12.36□□□□□ -0.43
COL6A2-204ENST00000409416 VWA2Q5GFL6 755 aa12.36□□□□□ -0.43
COL6A2-204ENST00000409416 FAAP20Q6NZ36 180 aa12.36□□□□□ -0.43
COL6A2-204ENST00000409416 GPR135Q8IZ08 494 aa12.36□□□□□ -0.43
COL6A2-204ENST00000409416 RFLNBQ8N5W9 214 aa12.36□□□□□ -0.43
COL6A2-204ENST00000409416 OR5W2Q8NH69 310 aa12.36□□□□□ -0.43
COL6A2-204ENST00000409416 ZNF775Q96BV0 537 aaPredicted RBP12.36□□□□□ -0.43
COL6A2-204ENST00000409416 SDF2Q99470 211 aa12.36□□□□□ -0.43
COL6A2-204ENST00000409416 MESP1Q9BRJ9 268 aa12.36□□□□□ -0.43
COL6A2-204ENST00000409416 TMEM43Q9BTV4 400 aa12.36□□□□□ -0.43
COL6A2-204ENST00000409416 BCL2L10Q9HD36 194 aa12.36□□□□□ -0.43
COL6A2-204ENST00000409416 ADAM29Q9UKF5 820 aa12.36□□□□□ -0.43
COL6A2-204ENST00000409416 CDH10Q9Y6N8 788 aa12.36□□□□□ -0.43
COL6A2-204ENST00000409416 DUXAA6NLW8 204 aa12.36□□□□□ -0.43
COL6A2-204ENST00000409416 ZIC2O95409 532 aaPredicted RBP12.36□□□□□ -0.43
COL6A2-204ENST00000409416 FCARP24071 287 aa12.36□□□□□ -0.43
COL6A2-204ENST00000409416 GPR176Q14439 515 aa12.36□□□□□ -0.43
COL6A2-204ENST00000409416 FCN2Q15485 313 aa12.36□□□□□ -0.43
COL6A2-204ENST00000409416 SLC35D2Q76EJ3 337 aa12.36□□□□□ -0.43
COL6A2-204ENST00000409416 CEP76Q8TAP6 659 aa12.36□□□□□ -0.43
COL6A2-204ENST00000409416 TRMT10AQ8TBZ6 339 aaKnown RBP12.36□□□□□ -0.43
COL6A2-204ENST00000409416 AKAP1Q92667 903 aaKnown RBP eCLIP12.36□□□□□ -0.43
COL6A2-204ENST00000409416 ORAI3Q9BRQ5 295 aa12.36□□□□□ -0.43
COL6A2-204ENST00000409416 C1QTNF2Q9BXJ5 285 aa12.36□□□□□ -0.43
COL6A2-204ENST00000409416 TEX101Q9BY14 249 aa12.36□□□□□ -0.43
COL6A2-204ENST00000409416 TRIM36Q9NQ86 728 aa12.36□□□□□ -0.43
COL6A2-204ENST00000409416 LRRK1Q38SD2 2015 aa12.35□□□□□ -0.43
COL6A2-204ENST00000409416 LOC105371267A0A1B0GV96 52 aa12.35□□□□□ -0.43
COL6A2-204ENST00000409416 KDM4EB2RXH2 506 aaPredicted RBP12.35□□□□□ -0.43
COL6A2-204ENST00000409416 APBB3O95704 486 aa12.35□□□□□ -0.43
COL6A2-204ENST00000409416 MAS1P04201 325 aa12.35□□□□□ -0.43
COL6A2-204ENST00000409416 ERP29P30040 261 aaKnown RBP12.35□□□□□ -0.43
COL6A2-204ENST00000409416 HTR1FP30939 366 aa12.35□□□□□ -0.43
COL6A2-204ENST00000409416 UQCRC1P31930 480 aa12.35□□□□□ -0.43
COL6A2-204ENST00000409416 FRKP42685 505 aaPredicted RBP12.35□□□□□ -0.43
COL6A2-204ENST00000409416 GAS1P54826 345 aa12.35□□□□□ -0.43
COL6A2-204ENST00000409416 NFATC4Q14934 902 aa12.35□□□□□ -0.43
COL6A2-204ENST00000409416 ZIC1Q15915 447 aa12.35□□□□□ -0.43
COL6A2-204ENST00000409416 NTRK2Q16620 822 aa12.35□□□□□ -0.43
COL6A2-204ENST00000409416 AADACL4Q5VUY2 407 aa12.35□□□□□ -0.43
COL6A2-204ENST00000409416 LINGO2Q7L985 606 aa12.35□□□□□ -0.43
COL6A2-204ENST00000409416 DNAAF1Q8NEP3 725 aa12.35□□□□□ -0.43
COL6A2-204ENST00000409416 NDC1Q9BTX1 674 aa12.35□□□□□ -0.43
COL6A2-204ENST00000409416 PPIL3Q9H2H8 161 aaKnown RBP12.35□□□□□ -0.43
COL6A2-204ENST00000409416 SLA2Q9H6Q3 261 aa12.35□□□□□ -0.43
COL6A2-204ENST00000409416 PRTFDC1Q9NRG1 225 aa12.35□□□□□ -0.43
COL6A2-204ENST00000409416 SIDT1Q9NXL6 827 aaKnown RBP12.35□□□□□ -0.43
COL6A2-204ENST00000409416 BABAM2Q9NXR7 383 aa12.35□□□□□ -0.43
COL6A2-204ENST00000409416 DAPP1Q9UN19 280 aa12.35□□□□□ -0.43
COL6A2-204ENST00000409416 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.35□□□□□ -0.43
COL6A2-204ENST00000409416 ELOA3DA6NLF2 546 aaPredicted RBP12.35□□□□□ -0.43
COL6A2-204ENST00000409416 C2orf74A8MZ97 194 aa12.35□□□□□ -0.43
COL6A2-204ENST00000409416 CENPBD1B2RD01 187 aa12.35□□□□□ -0.43
COL6A2-204ENST00000409416 FABP7O15540 132 aa12.35□□□□□ -0.43
COL6A2-204ENST00000409416 SSNA1O43805 119 aa12.35□□□□□ -0.43
COL6A2-204ENST00000409416 OR6A2O95222 327 aa12.35□□□□□ -0.43
COL6A2-204ENST00000409416 OC90Q02509 493 aaPredicted RBP12.35□□□□□ -0.43
COL6A2-204ENST00000409416 SLC25A35Q3KQZ1 300 aa12.35□□□□□ -0.43
COL6A2-204ENST00000409416 ELOA3BQ3SY89 546 aa12.35□□□□□ -0.43
COL6A2-204ENST00000409416 TMEM91Q6ZNR0 172 aa12.35□□□□□ -0.43
COL6A2-204ENST00000409416 MBOAT2Q6ZWT7 520 aa12.35□□□□□ -0.43
COL6A2-204ENST00000409416 OR8H3Q8N146 312 aa12.35□□□□□ -0.43
COL6A2-204ENST00000409416 SLC44A3Q8N4M1 653 aa12.35□□□□□ -0.43
COL6A2-204ENST00000409416 ELOA3Q8NG57 546 aa12.35□□□□□ -0.43
COL6A2-204ENST00000409416 OR4C3Q8NH37 302 aa12.35□□□□□ -0.43
COL6A2-204ENST00000409416 MENTQ9BUN1 341 aa12.35□□□□□ -0.43
COL6A2-204ENST00000409416 CDV3Q9UKY7 258 aaKnown RBP12.35□□□□□ -0.43
COL6A2-204ENST00000409416 LIPT1Q9Y234 373 aa12.35□□□□□ -0.43
COL6A2-204ENST00000409416 VDAC3Q9Y277 283 aa12.35□□□□□ -0.43
COL6A2-204ENST00000409416 MTCL1Q9Y4B5 1905 aaKnown RBP12.35□□□□□ -0.43
COL6A2-204ENST00000409416 HEATR5AQ86XA9 2040 aa12.35□□□□□ -0.43
COL6A2-204ENST00000409416 F10P00742 488 aa12.34□□□□□ -0.43
COL6A2-204ENST00000409416 THY1P04216 161 aa12.34□□□□□ -0.43
COL6A2-204ENST00000409416 FPR3P25089 353 aa12.34□□□□□ -0.43
COL6A2-204ENST00000409416 RRAS2P62070 204 aaPredicted RBP12.34□□□□□ -0.43
COL6A2-204ENST00000409416 SF3A2Q15428 464 aaKnown RBP12.34□□□□□ -0.43
COL6A2-204ENST00000409416 GJD3Q8N144 294 aa12.34□□□□□ -0.43
COL6A2-204ENST00000409416 OR5H6Q8NGV6 325 aa12.34□□□□□ -0.43
COL6A2-204ENST00000409416 OR6N2Q8NGY6 317 aa12.34□□□□□ -0.43
COL6A2-204ENST00000409416 TSLPQ969D9 159 aa12.34□□□□□ -0.43
COL6A2-204ENST00000409416 JSRP1Q96MG2 331 aaPredicted RBP12.34□□□□□ -0.43
COL6A2-204ENST00000409416 MS4A4EQ96PG1 132 aa12.34□□□□□ -0.43
COL6A2-204ENST00000409416 PPP1R3EQ9H7J1 279 aa12.34□□□□□ -0.43
COL6A2-204ENST00000409416 LMAN1LQ9HAT1 526 aa12.34□□□□□ -0.43
COL6A2-204ENST00000409416 EVA1BQ9NVM1 165 aa12.34□□□□□ -0.43
COL6A2-204ENST00000409416 PPIEQ9UNP9 301 aaKnown RBP12.34□□□□□ -0.43
COL6A2-204ENST00000409416 A0A1W2PQF6 199 aa12.34□□□□□ -0.43
COL6A2-204ENST00000409416 POU3F3P20264 500 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 189.3 ms