RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 TAS2R19P59542 299 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 SELENOVP59797 346 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 TNFRSF17Q02223 184 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 SLC22A6Q4U2R8 563 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 HENMT1Q5T8I9 393 aaKnown RBP12.8□□□□□ -0.36
RTN4-202ENST00000337526 ZNF529Q6P280 563 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 RTL10Q7L3V2 364 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 ZNF100Q8IYN0 542 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 OR7G2Q8NG99 324 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 PSD2Q9BQI7 771 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 CDC14CA4D256 554 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 KDM4EB2RXH2 506 aaPredicted RBP12.8□□□□□ -0.36
RTN4-202ENST00000337526 TARM1B6A8C7 271 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 UBL3O95164 117 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 HMGA1P17096 107 aaKnown RBP12.8□□□□□ -0.36
RTN4-202ENST00000337526 MTNR1BP49286 362 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 EMP2P54851 167 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 GP2P55259 537 aaKnown RBP12.8□□□□□ -0.36
RTN4-202ENST00000337526 LTB4R2Q9NPC1 389 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 SUSD2Q9UGT4 822 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 POLHQ9Y253 713 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 ATG4BQ9Y4P1 393 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 B3GALT1Q9Y5Z6 326 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 PIGBOS1A0A0B4J2F0 54 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 GGT3PA6NGU5 568 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 CPNE6O95741 557 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 HRGP04196 525 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 S100PP25815 95 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 TEAD1P28347 426 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 ZNF852Q6ZMS4 543 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 RTN4RL1Q86UN2 441 aaPredicted RBP12.8□□□□□ -0.36
RTN4-202ENST00000337526 NLRP8Q86W28 1048 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 FAM109AQ8N4B1 249 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 BPIFB2Q8N4F0 458 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 SLC35B4Q969S0 331 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 SPTSSAQ969W0 71 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 ELP4Q96EB1 424 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 CNTNAP3BQ96NU0 1288 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 FAM86C1Q9NVL1 165 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 SLC22A7Q9Y694 548 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 EVPLQ92817 2033 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 FAM155AB1AL88 458 aaPredicted RBP12.8□□□□□ -0.36
RTN4-202ENST00000337526 TP53P04637 393 aaPredicted RBP12.8□□□□□ -0.36
RTN4-202ENST00000337526 HTR1FP30939 366 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 RPL35P42766 123 aaKnown RBP12.8□□□□□ -0.36
RTN4-202ENST00000337526 LBX1P52954 281 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 ACY1Q03154 408 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 NFATC4Q14934 902 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 SOWAHCQ53LP3 525 aaPredicted RBP12.8□□□□□ -0.36
RTN4-202ENST00000337526 ANKRD34AQ69YU3 496 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 GLB1L2Q8IW92 636 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 SLC16A11Q8NCK7 471 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 TMEM106AQ96A25 262 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 ZNF285Q96NJ3 590 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 ALG12Q9BV10 488 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 IKZF5Q9H5V7 419 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 PLEK2Q9NYT0 353 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 FTSJ1Q9UET6 329 aa12.8□□□□□ -0.36
RTN4-202ENST00000337526 RPH3AQ9Y2J0 694 aaPredicted RBP12.8□□□□□ -0.36
RTN4-202ENST00000337526 TRDV1A0A1B0GX56 115 aa12.79□□□□□ -0.36
RTN4-202ENST00000337526 CDHR4A6H8M9 788 aa12.79□□□□□ -0.36
RTN4-202ENST00000337526 H3BUI4 141 aa12.79□□□□□ -0.36
RTN4-202ENST00000337526 I6L893 689 aaPredicted RBP12.79□□□□□ -0.36
RTN4-202ENST00000337526 ABLIM3O94929 683 aa12.79□□□□□ -0.36
RTN4-202ENST00000337526 MAKP20794 623 aa12.79□□□□□ -0.36
RTN4-202ENST00000337526 TRIM23P36406 574 aa12.79□□□□□ -0.36
RTN4-202ENST00000337526 OXA1LQ15070 435 aa12.79□□□□□ -0.36
RTN4-202ENST00000337526 DEFB133Q30KQ1 61 aa12.79□□□□□ -0.36
RTN4-202ENST00000337526 VASNQ6EMK4 673 aa12.79□□□□□ -0.36
RTN4-202ENST00000337526 OR5M10Q6IEU7 315 aa12.79□□□□□ -0.36
RTN4-202ENST00000337526 RAB11FIP2Q7L804 512 aa12.79□□□□□ -0.36
RTN4-202ENST00000337526 IL17RCQ8NAC3 791 aa12.79□□□□□ -0.36
RTN4-202ENST00000337526 TOX2Q96NM4 488 aa12.79□□□□□ -0.36
RTN4-202ENST00000337526 SIAEQ9HAT2 523 aa12.79□□□□□ -0.36
RTN4-202ENST00000337526 FANCFQ9NPI8 374 aa12.79□□□□□ -0.36
RTN4-202ENST00000337526 ACER3Q9NUN7 267 aa12.79□□□□□ -0.36
RTN4-202ENST00000337526 NPAP1Q9NZP6 1156 aa12.79□□□□□ -0.36
RTN4-202ENST00000337526 TMEM202A6NGA9 273 aa12.79□□□□□ -0.36
RTN4-202ENST00000337526 C1orf196B1AJZ1 125 aa12.79□□□□□ -0.36
RTN4-202ENST00000337526 SULT2B1O00204 365 aa12.79□□□□□ -0.36
RTN4-202ENST00000337526 PLPP1O14494 284 aa12.79□□□□□ -0.36
RTN4-202ENST00000337526 SLC43A1O75387 559 aa12.79□□□□□ -0.36
RTN4-202ENST00000337526 MAOAP21397 527 aa12.79□□□□□ -0.36
RTN4-202ENST00000337526 PRKACBP22694 351 aa12.79□□□□□ -0.36
RTN4-202ENST00000337526 PRKAR1BP31321 381 aa12.79□□□□□ -0.36
RTN4-202ENST00000337526 TM4SF4P48230 202 aa12.79□□□□□ -0.36
RTN4-202ENST00000337526 VASPP50552 380 aaPredicted RBP12.79□□□□□ -0.36
RTN4-202ENST00000337526 SNRPGP62308 76 aaKnown RBP12.79□□□□□ -0.36
RTN4-202ENST00000337526 REEP5Q00765 189 aa12.79□□□□□ -0.36
RTN4-202ENST00000337526 FOXK2Q01167 660 aa12.79□□□□□ -0.36
RTN4-202ENST00000337526 SMAD2Q15796 467 aaKnown RBP12.79□□□□□ -0.36
RTN4-202ENST00000337526 RBM45Q8IUH3 476 aaKnown RBP12.79□□□□□ -0.36
RTN4-202ENST00000337526 OR6V1Q8N148 313 aa12.79□□□□□ -0.36
RTN4-202ENST00000337526 IL17RDQ8NFM7 739 aa12.79□□□□□ -0.36
RTN4-202ENST00000337526 DUSP19Q8WTR2 217 aa12.79□□□□□ -0.36
RTN4-202ENST00000337526 FOXRED1Q96CU9 486 aaPredicted RBP12.79□□□□□ -0.36
RTN4-202ENST00000337526 HCAR1Q9BXC0 346 aa12.79□□□□□ -0.36
RTN4-202ENST00000337526 UBQLN3Q9H347 655 aa12.79□□□□□ -0.36
RTN4-202ENST00000337526 CA14Q9ULX7 337 aa12.79□□□□□ -0.36
RTN4-202ENST00000337526 CA5BQ9Y2D0 317 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms