RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 OR5J2Q8NH18 312 aa12.52□□□□□ -0.41
CDH8-201ENST00000299345 THAP4Q8WY91 577 aa12.52□□□□□ -0.41
CDH8-201ENST00000299345 VSTM2LQ96N03 204 aa12.52□□□□□ -0.41
CDH8-201ENST00000299345 GAL3ST4Q96RP7 486 aa12.52□□□□□ -0.41
CDH8-201ENST00000299345 LRRC61Q9BV99 259 aa12.52□□□□□ -0.41
CDH8-201ENST00000299345 ERVMER34-1Q9H9K5 563 aa12.52□□□□□ -0.41
CDH8-201ENST00000299345 MCCC2Q9HCC0 563 aa12.52□□□□□ -0.41
CDH8-201ENST00000299345 BRD7Q9NPI1 651 aa12.52□□□□□ -0.41
CDH8-201ENST00000299345 PLCL2Q9UPR0 1127 aa12.52□□□□□ -0.41
CDH8-201ENST00000299345 EFCAB7A8K855 629 aa12.51□□□□□ -0.41
CDH8-201ENST00000299345 TMEM150CB9EJG8 249 aa12.51□□□□□ -0.41
CDH8-201ENST00000299345 SCDO00767 359 aa12.51□□□□□ -0.41
CDH8-201ENST00000299345 PLPP2O43688 288 aa12.51□□□□□ -0.41
CDH8-201ENST00000299345 PRKNO60260 465 aaPredicted RBP12.51□□□□□ -0.41
CDH8-201ENST00000299345 CPNE3O75131 537 aaKnown RBP12.51□□□□□ -0.41
CDH8-201ENST00000299345 NUDT14O95848 222 aa12.51□□□□□ -0.41
CDH8-201ENST00000299345 TRAPPC2P0DI81 140 aa12.51□□□□□ -0.41
CDH8-201ENST00000299345 TRAPPC2BP0DI82 140 aa12.51□□□□□ -0.41
CDH8-201ENST00000299345 TCEA1P23193 301 aaKnown RBP12.51□□□□□ -0.41
CDH8-201ENST00000299345 GDI2P50395 445 aaKnown RBP12.51□□□□□ -0.41
CDH8-201ENST00000299345 C17orf47Q8NEP4 570 aa12.51□□□□□ -0.41
CDH8-201ENST00000299345 OR4M1Q8NGD0 313 aa12.51□□□□□ -0.41
CDH8-201ENST00000299345 NMNAT3Q96T66 252 aa12.51□□□□□ -0.41
CDH8-201ENST00000299345 THAP7Q9BT49 309 aaPredicted RBP12.51□□□□□ -0.41
CDH8-201ENST00000299345 SYNDIG1Q9H7V2 258 aa12.51□□□□□ -0.41
CDH8-201ENST00000299345 DTX4Q9Y2E6 619 aa12.51□□□□□ -0.41
CDH8-201ENST00000299345 A0A1B0GVT2 93 aa12.51□□□□□ -0.41
CDH8-201ENST00000299345 A0A1W2PPC4 97 aa12.51□□□□□ -0.41
CDH8-201ENST00000299345 FAM172BPA6NC97 362 aa12.51□□□□□ -0.41
CDH8-201ENST00000299345 HIST1H2ABP04908 130 aa12.51□□□□□ -0.41
CDH8-201ENST00000299345 OR2T7P0C7T2 308 aa12.51□□□□□ -0.41
CDH8-201ENST00000299345 MAOBP27338 520 aa12.51□□□□□ -0.41
CDH8-201ENST00000299345 FGFBP1Q14512 234 aa12.51□□□□□ -0.41
CDH8-201ENST00000299345 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.51□□□□□ -0.41
CDH8-201ENST00000299345 HLA-DQA1Q5Y7H0 255 aa12.51□□□□□ -0.41
CDH8-201ENST00000299345 HIST3H2AQ7L7L0 130 aa12.51□□□□□ -0.41
CDH8-201ENST00000299345 GLCCI1Q86VQ1 547 aa12.51□□□□□ -0.41
CDH8-201ENST00000299345 SLC43A2Q8N370 569 aa12.51□□□□□ -0.41
CDH8-201ENST00000299345 ZNF433Q8N7K0 673 aaPredicted RBP12.51□□□□□ -0.41
CDH8-201ENST00000299345 OR2T27Q8NH04 317 aa12.51□□□□□ -0.41
CDH8-201ENST00000299345 OR51Q1Q8NH59 317 aa12.51□□□□□ -0.41
CDH8-201ENST00000299345 HIST1H2ACQ93077 130 aa12.51□□□□□ -0.41
CDH8-201ENST00000299345 KISS1RQ969F8 398 aaPredicted RBP12.51□□□□□ -0.41
CDH8-201ENST00000299345 PHF21AQ96BD5 680 aa12.51□□□□□ -0.41
CDH8-201ENST00000299345 SENP5Q96HI0 755 aaPredicted RBP12.51□□□□□ -0.41
CDH8-201ENST00000299345 ST6GAL2Q96JF0 529 aa12.51□□□□□ -0.41
CDH8-201ENST00000299345 FYTTD1Q96QD9 318 aaKnown RBP12.51□□□□□ -0.41
CDH8-201ENST00000299345 C17orf105B2RV13 164 aa12.51□□□□□ -0.41
CDH8-201ENST00000299345 C2CD4DB7Z1M9 353 aa12.51□□□□□ -0.41
CDH8-201ENST00000299345 MCIDASD6RGH6 385 aa12.51□□□□□ -0.41
CDH8-201ENST00000299345 MAP3K8P41279 467 aa12.51□□□□□ -0.41
CDH8-201ENST00000299345 POMZP3Q6PJE2 187 aa12.51□□□□□ -0.41
CDH8-201ENST00000299345 BCORP1Q8N888 145 aa12.51□□□□□ -0.41
CDH8-201ENST00000299345 POMGNT2Q8NAT1 580 aa12.51□□□□□ -0.41
CDH8-201ENST00000299345 OR13C5Q8NGS8 318 aa12.51□□□□□ -0.41
CDH8-201ENST00000299345 TMEM246Q9BRR3 403 aa12.51□□□□□ -0.41
CDH8-201ENST00000299345 SLC2A4RGQ9NR83 387 aa12.51□□□□□ -0.41
CDH8-201ENST00000299345 BOLA1Q9Y3E2 137 aa12.51□□□□□ -0.41
CDH8-201ENST00000299345 SEC16AO15027 2179 aa12.5□□□□□ -0.41
CDH8-201ENST00000299345 RHPN2P1A8MT19 583 aa12.5□□□□□ -0.41
CDH8-201ENST00000299345 FAM171A2A8MVW0 826 aa12.5□□□□□ -0.41
CDH8-201ENST00000299345 NSA2O95478 260 aaKnown RBP12.5□□□□□ -0.41
CDH8-201ENST00000299345 ITPKBP27987 946 aa12.5□□□□□ -0.41
CDH8-201ENST00000299345 GRPRP30550 384 aa12.5□□□□□ -0.41
CDH8-201ENST00000299345 ZNF85Q03923 595 aa12.5□□□□□ -0.41
CDH8-201ENST00000299345 SERTAD2Q14140 314 aa12.5□□□□□ -0.41
CDH8-201ENST00000299345 SNAP47Q5SQN1 464 aa12.5□□□□□ -0.41
CDH8-201ENST00000299345 CMIPQ8IY22 773 aa12.5□□□□□ -0.41
CDH8-201ENST00000299345 ZNF440Q8IYI8 595 aa12.5□□□□□ -0.41
CDH8-201ENST00000299345 LSMEM1Q8N8F7 131 aa12.5□□□□□ -0.41
CDH8-201ENST00000299345 ASCC1Q8N9N2 400 aaKnown RBP12.5□□□□□ -0.41
CDH8-201ENST00000299345 NDEL1Q9GZM8 345 aa12.5□□□□□ -0.41
CDH8-201ENST00000299345 B3GAT2Q9NPZ5 323 aa12.5□□□□□ -0.41
CDH8-201ENST00000299345 NANSQ9NR45 359 aa12.5□□□□□ -0.41
CDH8-201ENST00000299345 WSB2Q9NYS7 404 aaPredicted RBP12.5□□□□□ -0.41
CDH8-201ENST00000299345 ZNF337Q9Y3M9 751 aa12.5□□□□□ -0.41
CDH8-201ENST00000299345 TDRD6O60522 2096 aaKnown RBP12.5□□□□□ -0.41
CDH8-201ENST00000299345 BLACEA4D250 179 aa12.5□□□□□ -0.41
CDH8-201ENST00000299345 J3QRE1 110 aa12.5□□□□□ -0.41
CDH8-201ENST00000299345 DHFRP00374 187 aa12.5□□□□□ -0.41
CDH8-201ENST00000299345 GAAP10253 952 aa12.5□□□□□ -0.41
CDH8-201ENST00000299345 PSMB10P40306 273 aa12.5□□□□□ -0.41
CDH8-201ENST00000299345 FAM53BQ14153 422 aa12.5□□□□□ -0.41
CDH8-201ENST00000299345 PRTGQ2VWP7 1150 aa12.5□□□□□ -0.41
CDH8-201ENST00000299345 TCTE1Q5JU00 501 aa12.5□□□□□ -0.41
CDH8-201ENST00000299345 VASNQ6EMK4 673 aa12.5□□□□□ -0.41
CDH8-201ENST00000299345 FAM220AQ7Z4H9 259 aa12.5□□□□□ -0.41
CDH8-201ENST00000299345 PELOQ9BRX2 385 aaKnown RBP12.5□□□□□ -0.41
CDH8-201ENST00000299345 RPRD1BQ9NQG5 326 aaKnown RBP12.5□□□□□ -0.41
CDH8-201ENST00000299345 NOX1Q9Y5S8 564 aa12.5□□□□□ -0.41
CDH8-201ENST00000299345 ALG5Q9Y673 324 aa12.5□□□□□ -0.41
CDH8-201ENST00000299345 ADAM11O75078 769 aa12.5□□□□□ -0.41
CDH8-201ENST00000299345 NGFRP08138 427 aa12.5□□□□□ -0.41
CDH8-201ENST00000299345 IFI6P09912 130 aa12.5□□□□□ -0.41
CDH8-201ENST00000299345 SIRPAP78324 504 aa12.5□□□□□ -0.41
CDH8-201ENST00000299345 CCINQ13939 588 aa12.5□□□□□ -0.41
CDH8-201ENST00000299345 ZNF141Q15928 474 aa12.5□□□□□ -0.41
CDH8-201ENST00000299345 LEG1Q6P5S2 330 aa12.5□□□□□ -0.41
CDH8-201ENST00000299345 DPY19L2P2Q6ZN68 376 aa12.5□□□□□ -0.41
CDH8-201ENST00000299345 TTLL10Q6ZVT0 673 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms