RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 ZDHHC12Q96GR4 267 aa16.07■□□□□ 0.16
FAM3A-222ENST00000621967 FRMD6Q96NE9 622 aa16.07■□□□□ 0.16
FAM3A-222ENST00000621967 TGM7Q96PF1 710 aa16.07■□□□□ 0.16
FAM3A-222ENST00000621967 ALG8Q9BVK2 526 aa16.07■□□□□ 0.16
FAM3A-222ENST00000621967 ENKD1Q9H0I2 346 aa16.07■□□□□ 0.16
FAM3A-222ENST00000621967 B3GAT2Q9NPZ5 323 aa16.07■□□□□ 0.16
FAM3A-222ENST00000621967 CMC2Q9NRP2 79 aa16.07■□□□□ 0.16
FAM3A-222ENST00000621967 FBXO34Q9NWN3 711 aa16.07■□□□□ 0.16
FAM3A-222ENST00000621967 POMT2Q9UKY4 750 aa16.07■□□□□ 0.16
FAM3A-222ENST00000621967 MRPS2Q9Y399 296 aaKnown RBP16.07■□□□□ 0.16
FAM3A-222ENST00000621967 LOC105369274A0A096LPK9 316 aa16.07■□□□□ 0.16
FAM3A-222ENST00000621967 LOC102723532A0A0G2JNH3 316 aa16.07■□□□□ 0.16
FAM3A-222ENST00000621967 FAM47E-STBD1D6RA91 191 aa16.07■□□□□ 0.16
FAM3A-222ENST00000621967 PEX12O00623 359 aa16.07■□□□□ 0.16
FAM3A-222ENST00000621967 FGF17O60258 216 aa16.07■□□□□ 0.16
FAM3A-222ENST00000621967 AK1P00568 194 aa16.07■□□□□ 0.16
FAM3A-222ENST00000621967 GKN3PP0CG01 181 aa16.07■□□□□ 0.16
FAM3A-222ENST00000621967 FAM157BP0CG42 384 aa16.07■□□□□ 0.16
FAM3A-222ENST00000621967 IFI30P13284 250 aa16.07■□□□□ 0.16
FAM3A-222ENST00000621967 FUT1P19526 365 aa16.07■□□□□ 0.16
FAM3A-222ENST00000621967 CD1CP29017 333 aa16.07■□□□□ 0.16
FAM3A-222ENST00000621967 MLLT3P42568 568 aaPredicted RBP16.07■□□□□ 0.16
FAM3A-222ENST00000621967 MAP2K3P46734 347 aa16.07■□□□□ 0.16
FAM3A-222ENST00000621967 ID2Q02363 134 aa16.07■□□□□ 0.16
FAM3A-222ENST00000621967 PLAURQ03405 335 aa16.07■□□□□ 0.16
FAM3A-222ENST00000621967 OR4N4Q8N0Y3 316 aa16.07■□□□□ 0.16
FAM3A-222ENST00000621967 ENKURQ8TC29 256 aa16.07■□□□□ 0.16
FAM3A-222ENST00000621967 KCNJ15Q99712 375 aa16.07■□□□□ 0.16
FAM3A-222ENST00000621967 ZFYVE21Q9BQ24 234 aa16.07■□□□□ 0.16
FAM3A-222ENST00000621967 LRRN3Q9H3W5 708 aa16.07■□□□□ 0.16
FAM3A-222ENST00000621967 ATP13A2Q9NQ11 1180 aa16.07■□□□□ 0.16
FAM3A-222ENST00000621967 INPP5EQ9NRR6 644 aa16.07■□□□□ 0.16
FAM3A-222ENST00000621967 DDX28Q9NUL7 540 aaKnown RBP16.07■□□□□ 0.16
FAM3A-222ENST00000621967 RBFOX1Q9NWB1 397 aaKnown RBP16.07■□□□□ 0.16
FAM3A-222ENST00000621967 BABAM2Q9NXR7 383 aa16.07■□□□□ 0.16
FAM3A-222ENST00000621967 TMEM5Q9Y2B1 443 aa16.07■□□□□ 0.16
FAM3A-222ENST00000621967 SIRT4Q9Y6E7 314 aaPredicted RBP16.07■□□□□ 0.16
FAM3A-222ENST00000621967 C2orf92A0A1B0GVN3 265 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 CENPXA8MT69 81 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 CYR61O00622 381 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 SLC19A2O60779 497 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 BMP7P18075 431 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 TCEA1P23193 301 aaKnown RBP16.06■□□□□ 0.16
FAM3A-222ENST00000621967 S100A1P23297 94 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 HLA-DMAP28067 261 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 GFERP55789 205 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 CTBP2P56545 445 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 CCL7P80098 99 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 MGAT2Q10469 447 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 QPRTQ15274 297 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 PRICKLE4Q2TBC4 344 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 CCDC157Q569K6 752 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 TRIQKQ629K1 86 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 B3GLCTQ6Y288 498 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 TRILQ7L0X0 811 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 PIP4P1Q86T03 277 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 TMEM99Q8N816 258 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 COX18Q8N8Q8 333 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 TMEM52Q8NDY8 209 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 DUSP18Q8NEJ0 188 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 ACOT12Q8WYK0 555 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 RNF170Q96K19 258 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 UBL7Q96S82 380 aaPredicted RBP16.06■□□□□ 0.16
FAM3A-222ENST00000621967 TMEM43Q9BTV4 400 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 HCAR1Q9BXC0 346 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 RAB33BQ9H082 229 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 KCNN2Q9H2S1 579 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 MED20Q9H944 212 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 MARCH7Q9H992 704 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 MAT2BQ9NZL9 334 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 EPHA6Q9UF33 1036 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 ADAM30Q9UKF2 790 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 SIGLEC7Q9Y286 467 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 SPEGQ15772 3267 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 A0A0J9YY10 115 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 ZNF860A6NHJ4 632 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 A8MV72 311 aaPredicted RBP16.06■□□□□ 0.16
FAM3A-222ENST00000621967 H0YGG7 62 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 SGK494L7N484 410 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 DVL2O14641 736 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 LDB3O75112 727 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 RCBTB2O95199 551 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 GPR75O95800 540 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 CD53P19397 219 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 CSF2RBP32927 897 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 ARF3P61204 181 aaPredicted RBP16.06■□□□□ 0.16
FAM3A-222ENST00000621967 GALEQ14376 348 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 WDR74Q6RFH5 385 aaPredicted RBP16.06■□□□□ 0.16
FAM3A-222ENST00000621967 THSD4Q6ZMP0 1018 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 PRSS41Q7RTY9 318 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 NR2C2APQ86WQ0 139 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 C19orf18Q8NEA5 215 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 DEFB124Q8NES8 71 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 HOXB13Q92826 284 aaPredicted RBP16.06■□□□□ 0.16
FAM3A-222ENST00000621967 NUDT22Q9BRQ3 303 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 EVA1AQ9H8M9 152 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 POLE3Q9NRF9 147 aa16.06■□□□□ 0.16
FAM3A-222ENST00000621967 ATXN7L1Q9ULK2 861 aaPredicted RBP16.06■□□□□ 0.16
FAM3A-222ENST00000621967 UNC13CQ8NB66 2214 aa16.05■□□□□ 0.16
FAM3A-222ENST00000621967 NPIPA5A0A0B4J1W7 369 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms