RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 SFTPDP35247 375 aa9.91□□□□□ -0.82
CHD3-216ENST00000573936 EIF1AXP47813 144 aaKnown RBP9.91□□□□□ -0.82
CHD3-216ENST00000573936 KCNJ5P48544 419 aa9.91□□□□□ -0.82
CHD3-216ENST00000573936 NCALDP61601 193 aa9.91□□□□□ -0.82
CHD3-216ENST00000573936 DMTNQ08495 405 aa9.91□□□□□ -0.82
CHD3-216ENST00000573936 GTF2IRD2BQ6EKJ0 949 aa9.91□□□□□ -0.82
CHD3-216ENST00000573936 OR2A2Q6IF42 318 aa9.91□□□□□ -0.82
CHD3-216ENST00000573936 SEM1Q6ZVN7 128 aa9.91□□□□□ -0.82
CHD3-216ENST00000573936 NCCRP1Q6ZVX7 275 aaPredicted RBP9.91□□□□□ -0.82
CHD3-216ENST00000573936 GTF2IRD2Q86UP8 949 aa9.91□□□□□ -0.82
CHD3-216ENST00000573936 RANBP3LQ86VV4 465 aaPredicted RBP9.91□□□□□ -0.82
CHD3-216ENST00000573936 PGAM4Q8N0Y7 254 aa9.91□□□□□ -0.82
CHD3-216ENST00000573936 CADM2Q8N3J6 435 aa9.91□□□□□ -0.82
CHD3-216ENST00000573936 SMYD1Q8NB12 490 aa9.91□□□□□ -0.82
CHD3-216ENST00000573936 ATP6V1C2Q8NEY4 427 aa9.91□□□□□ -0.82
CHD3-216ENST00000573936 OR10D3Q8NH80 312 aa9.91□□□□□ -0.82
CHD3-216ENST00000573936 CA5BP1Q8WTZ4 195 aa9.91□□□□□ -0.82
CHD3-216ENST00000573936 OSTF1Q92882 214 aa9.91□□□□□ -0.82
CHD3-216ENST00000573936 ZNF524Q96C55 264 aa9.91□□□□□ -0.82
CHD3-216ENST00000573936 DDIT4LQ96D03 193 aa9.91□□□□□ -0.82
CHD3-216ENST00000573936 ADGRG7Q96K78 797 aa9.91□□□□□ -0.82
CHD3-216ENST00000573936 ZNF559Q9BR84 538 aa9.91□□□□□ -0.82
CHD3-216ENST00000573936 PRRG4Q9BZD6 226 aa9.91□□□□□ -0.82
CHD3-216ENST00000573936 TRIM2Q9C040 744 aa9.91□□□□□ -0.82
CHD3-216ENST00000573936 ADAM19Q9H013 955 aa9.91□□□□□ -0.82
CHD3-216ENST00000573936 ALG2Q9H553 416 aa9.91□□□□□ -0.82
CHD3-216ENST00000573936 TMEM185BQ9H7F4 350 aa9.91□□□□□ -0.82
CHD3-216ENST00000573936 TMEM27Q9HBJ8 222 aa9.91□□□□□ -0.82
CHD3-216ENST00000573936 ADA2Q9NZK5 511 aa9.91□□□□□ -0.82
CHD3-216ENST00000573936 TMEM181Q9P2C4 612 aa9.91□□□□□ -0.82
CHD3-216ENST00000573936 CLCF1Q9UBD9 225 aa9.91□□□□□ -0.82
CHD3-216ENST00000573936 ABCD2Q9UBJ2 740 aa9.91□□□□□ -0.82
CHD3-216ENST00000573936 ZNF629Q9UEG4 869 aaPredicted RBP9.91□□□□□ -0.82
CHD3-216ENST00000573936 TESQ9UGI8 421 aaKnown RBP9.91□□□□□ -0.82
CHD3-216ENST00000573936 BAG5Q9UL15 447 aa9.91□□□□□ -0.82
CHD3-216ENST00000573936 RNF6Q9Y252 685 aa9.91□□□□□ -0.82
CHD3-216ENST00000573936 TMED7-TICAM2A0A0A6YYA0 188 aa9.9□□□□□ -0.82
CHD3-216ENST00000573936 A0A0G2JNJ9 132 aa9.9□□□□□ -0.82
CHD3-216ENST00000573936 SLC22A20A6NK97 555 aa9.9□□□□□ -0.82
CHD3-216ENST00000573936 H0YC42 278 aa9.9□□□□□ -0.82
CHD3-216ENST00000573936 NME4O00746 187 aa9.9□□□□□ -0.82
CHD3-216ENST00000573936 ZNF208O43345 1280 aa9.9□□□□□ -0.82
CHD3-216ENST00000573936 TPST1O60507 370 aa9.9□□□□□ -0.82
CHD3-216ENST00000573936 ADAM11O75078 769 aa9.9□□□□□ -0.82
CHD3-216ENST00000573936 GMNNO75496 209 aa9.9□□□□□ -0.82
CHD3-216ENST00000573936 IL18BPO95998 194 aa9.9□□□□□ -0.82
CHD3-216ENST00000573936 OPN1LWP04000 364 aa9.9□□□□□ -0.82
CHD3-216ENST00000573936 CRHP06850 196 aa9.9□□□□□ -0.82
CHD3-216ENST00000573936 TMIGD3P0DMS9 266 aaPredicted RBP9.9□□□□□ -0.82
CHD3-216ENST00000573936 TFPIP10646 304 aa9.9□□□□□ -0.82
CHD3-216ENST00000573936 IL11P20809 199 aa9.9□□□□□ -0.82
CHD3-216ENST00000573936 TACR3P29371 465 aa9.9□□□□□ -0.82
CHD3-216ENST00000573936 OPRM1P35372 400 aa9.9□□□□□ -0.82
CHD3-216ENST00000573936 TPD52P55327 224 aaPredicted RBP9.9□□□□□ -0.82
CHD3-216ENST00000573936 RGS8P57771 180 aaPredicted RBP9.9□□□□□ -0.82
CHD3-216ENST00000573936 RAC3P60763 192 aa9.9□□□□□ -0.82
CHD3-216ENST00000573936 CSNK2A1P68400 391 aaPredicted RBP9.9□□□□□ -0.82
CHD3-216ENST00000573936 GTF3C1Q12789 2109 aa9.9□□□□□ -0.82
CHD3-216ENST00000573936 PON3Q15166 354 aa9.9□□□□□ -0.82
CHD3-216ENST00000573936 DUSP7Q16829 419 aa9.9□□□□□ -0.82
CHD3-216ENST00000573936 CTU2Q2VPK5 515 aaKnown RBP9.9□□□□□ -0.82
CHD3-216ENST00000573936 SPATS1Q496A3 300 aa9.9□□□□□ -0.82
CHD3-216ENST00000573936 SYT14P1Q58G82 188 aa9.9□□□□□ -0.82
CHD3-216ENST00000573936 POMZP3Q6PJE2 187 aa9.9□□□□□ -0.82
CHD3-216ENST00000573936 RINLQ6ZS11 566 aa9.9□□□□□ -0.82
CHD3-216ENST00000573936 CCDC121Q6ZUS5 278 aa9.9□□□□□ -0.82
CHD3-216ENST00000573936 GDF7Q7Z4P5 450 aa9.9□□□□□ -0.82
CHD3-216ENST00000573936 ADGRG3Q86Y34 549 aa9.9□□□□□ -0.82
CHD3-216ENST00000573936 LSMEM1Q8N8F7 131 aa9.9□□□□□ -0.82
CHD3-216ENST00000573936 C9orf106Q8NAJ2 232 aa9.9□□□□□ -0.82
CHD3-216ENST00000573936 OR52E4Q8NGH9 312 aa9.9□□□□□ -0.82
CHD3-216ENST00000573936 LILRB4Q8NHJ6 448 aa9.9□□□□□ -0.82
CHD3-216ENST00000573936 DNAJA4Q8WW22 397 aaPredicted RBP9.9□□□□□ -0.82
CHD3-216ENST00000573936 LZICQ8WZA0 190 aa9.9□□□□□ -0.82
CHD3-216ENST00000573936 PROX1Q92786 737 aa9.9□□□□□ -0.82
CHD3-216ENST00000573936 CPNE4Q96A23 557 aaPredicted RBP9.9□□□□□ -0.82
CHD3-216ENST00000573936 OR5B2Q96R09 309 aa9.9□□□□□ -0.82
CHD3-216ENST00000573936 KCTD14Q9BQ13 255 aaPredicted RBP9.9□□□□□ -0.82
CHD3-216ENST00000573936 C12orf10Q9HB07 376 aa9.9□□□□□ -0.82
CHD3-216ENST00000573936 CHST11Q9NPF2 352 aa9.9□□□□□ -0.82
CHD3-216ENST00000573936 SELENONQ9NZV5 590 aa9.9□□□□□ -0.82
CHD3-216ENST00000573936 Q9UFV3 132 aa9.9□□□□□ -0.82
CHD3-216ENST00000573936 OSGIN1Q9UJX0 560 aa9.9□□□□□ -0.82
CHD3-216ENST00000573936 SLC9A8Q9Y2E8 581 aa9.9□□□□□ -0.82
CHD3-216ENST00000573936 TMED7Q9Y3B3 224 aa9.9□□□□□ -0.82
CHD3-216ENST00000573936 HDGFL3Q9Y3E1 203 aa9.9□□□□□ -0.82
CHD3-216ENST00000573936 KLF2Q9Y5W3 355 aaPredicted RBP9.9□□□□□ -0.82
CHD3-216ENST00000573936 F8P00451 2351 aa9.9□□□□□ -0.82
CHD3-216ENST00000573936 ZNF407Q9C0G0 2248 aa9.89□□□□□ -0.83
CHD3-216ENST00000573936 B2RBV5 119 aa9.89□□□□□ -0.83
CHD3-216ENST00000573936 DVL2O14641 736 aa9.89□□□□□ -0.83
CHD3-216ENST00000573936 CXCL13O43927 109 aa9.89□□□□□ -0.83
CHD3-216ENST00000573936 FMO6PO60774 539 aa9.89□□□□□ -0.83
CHD3-216ENST00000573936 TOXO94900 526 aa9.89□□□□□ -0.83
CHD3-216ENST00000573936 OPN1SWP03999 348 aa9.89□□□□□ -0.83
CHD3-216ENST00000573936 FESP07332 822 aa9.89□□□□□ -0.83
CHD3-216ENST00000573936 PRG2P13727 222 aa9.89□□□□□ -0.83
CHD3-216ENST00000573936 COX6B1P14854 86 aa9.89□□□□□ -0.83
CHD3-216ENST00000573936 CD247P20963 164 aa9.89□□□□□ -0.83
CHD3-216ENST00000573936 HTR1EP28566 365 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms