RNA–Protein interactions for RNA: ENST00000564111.5

SNX29-203, Transcript of sorting nexin 29, humanhuman

TSL 2

Gene SNX29, Length 2,248 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-203ENST00000564111 DEFB108AA8MXU0 73 aa13.19□□□□□ -0.3
SNX29-203ENST00000564111 ARHGEF9O43307 516 aa13.19□□□□□ -0.3
SNX29-203ENST00000564111 VIMP08670 466 aaKnown RBP13.19□□□□□ -0.3
SNX29-203ENST00000564111 H2AFXP16104 143 aaPredicted RBP13.19□□□□□ -0.3
SNX29-203ENST00000564111 IDH2P48735 452 aaKnown RBP13.19□□□□□ -0.3
SNX29-203ENST00000564111 SLC16A1P53985 500 aa13.19□□□□□ -0.3
SNX29-203ENST00000564111 CASP9P55211 416 aa13.19□□□□□ -0.3
SNX29-203ENST00000564111 LRIF1Q5T3J3 769 aa13.19□□□□□ -0.3
SNX29-203ENST00000564111 MRPL2Q5T653 305 aaKnown RBP13.19□□□□□ -0.3
SNX29-203ENST00000564111 WBP2NLQ6ICG8 309 aa13.19□□□□□ -0.3
SNX29-203ENST00000564111 DNAJC14Q6Y2X3 702 aaPredicted RBP13.19□□□□□ -0.3
SNX29-203ENST00000564111 KRT73Q86Y46 540 aa13.19□□□□□ -0.3
SNX29-203ENST00000564111 TGIF2LYQ8IUE0 185 aa13.19□□□□□ -0.3
SNX29-203ENST00000564111 TUSC5Q8IXB3 177 aa13.19□□□□□ -0.3
SNX29-203ENST00000564111 CKAP2Q8WWK9 683 aa13.19□□□□□ -0.3
SNX29-203ENST00000564111 KISS1RQ969F8 398 aaPredicted RBP13.19□□□□□ -0.3
SNX29-203ENST00000564111 MARK4Q96L34 752 aa13.19□□□□□ -0.3
SNX29-203ENST00000564111 C12orf49Q9H741 205 aa13.19□□□□□ -0.3
SNX29-203ENST00000564111 TMED7Q9Y3B3 224 aa13.19□□□□□ -0.3
SNX29-203ENST00000564111 LRBAP50851 2863 aa13.19□□□□□ -0.3
SNX29-203ENST00000564111 SMAD9O15198 467 aaKnown RBP13.19□□□□□ -0.3
SNX29-203ENST00000564111 BCHEP06276 602 aa13.19□□□□□ -0.3
SNX29-203ENST00000564111 FOSL1P15407 271 aa13.19□□□□□ -0.3
SNX29-203ENST00000564111 RNF144AP50876 292 aaPredicted RBP13.19□□□□□ -0.3
SNX29-203ENST00000564111 ACKR1Q16570 336 aa13.19□□□□□ -0.3
SNX29-203ENST00000564111 COX20Q5RI15 118 aa13.19□□□□□ -0.3
SNX29-203ENST00000564111 SHEQ5VZ18 495 aa13.19□□□□□ -0.3
SNX29-203ENST00000564111 BLOC1S3Q6QNY0 202 aa13.19□□□□□ -0.3
SNX29-203ENST00000564111 C5orf46Q6UWT4 87 aa13.19□□□□□ -0.3
SNX29-203ENST00000564111 Q6ZT83 130 aa13.19□□□□□ -0.3
SNX29-203ENST00000564111 PNPT1Q8TCS8 783 aaKnown RBP13.19□□□□□ -0.3
SNX29-203ENST00000564111 TSPEARQ8WU66 669 aa13.19□□□□□ -0.3
SNX29-203ENST00000564111 CNOT9Q92600 299 aaKnown RBP13.19□□□□□ -0.3
SNX29-203ENST00000564111 GTF2H4Q92759 462 aa13.19□□□□□ -0.3
SNX29-203ENST00000564111 SPDL1Q96EA4 605 aa13.19□□□□□ -0.3
SNX29-203ENST00000564111 KLHDC3Q9BQ90 382 aa13.19□□□□□ -0.3
SNX29-203ENST00000564111 PAIP1Q9H074 479 aaKnown RBP13.19□□□□□ -0.3
SNX29-203ENST00000564111 TMEM181Q9P2C4 612 aa13.19□□□□□ -0.3
SNX29-203ENST00000564111 SLC9A8Q9Y2E8 581 aa13.19□□□□□ -0.3
SNX29-203ENST00000564111 A0A1W2PNR3 127 aa13.18□□□□□ -0.3
SNX29-203ENST00000564111 PRAMEF27A3QJZ7 478 aa13.18□□□□□ -0.3
SNX29-203ENST00000564111 CDHR4A6H8M9 788 aa13.18□□□□□ -0.3
SNX29-203ENST00000564111 C9JVG2 144 aa13.18□□□□□ -0.3
SNX29-203ENST00000564111 CLIC1O00299 241 aa13.18□□□□□ -0.3
SNX29-203ENST00000564111 TFPTP0C1Z6 253 aa13.18□□□□□ -0.3
SNX29-203ENST00000564111 ETS2P15036 469 aa13.18□□□□□ -0.3
SNX29-203ENST00000564111 MVDP53602 400 aa13.18□□□□□ -0.3
SNX29-203ENST00000564111 AQP5P55064 265 aa13.18□□□□□ -0.3
SNX29-203ENST00000564111 SFRP5Q5T4F7 317 aa13.18□□□□□ -0.3
SNX29-203ENST00000564111 GCNT6Q5T4J0 391 aa13.18□□□□□ -0.3
SNX29-203ENST00000564111 SLC30A8Q8IWU4 369 aa13.18□□□□□ -0.3
SNX29-203ENST00000564111 ZNF100Q8IYN0 542 aa13.18□□□□□ -0.3
SNX29-203ENST00000564111 GABRG1Q8N1C3 465 aa13.18□□□□□ -0.3
SNX29-203ENST00000564111 C12orf10Q9HB07 376 aa13.18□□□□□ -0.3
SNX29-203ENST00000564111 PARPBPQ9NWS1 579 aa13.18□□□□□ -0.3
SNX29-203ENST00000564111 EVPLLA8MZ36 301 aa13.17□□□□□ -0.3
SNX29-203ENST00000564111 ETFAP13804 333 aa13.17□□□□□ -0.3
SNX29-203ENST00000564111 PAX7P23759 505 aa13.17□□□□□ -0.3
SNX29-203ENST00000564111 CXCR1P25024 350 aa13.17□□□□□ -0.3
SNX29-203ENST00000564111 RYKP34925 604 aa13.17□□□□□ -0.3
SNX29-203ENST00000564111 ITGADQ13349 1161 aa13.17□□□□□ -0.3
SNX29-203ENST00000564111 RGNQ15493 299 aa13.17□□□□□ -0.3
SNX29-203ENST00000564111 SLC38A5Q8WUX1 472 aa13.17□□□□□ -0.3
SNX29-203ENST00000564111 TMEM19Q96HH6 336 aa13.17□□□□□ -0.3
SNX29-203ENST00000564111 PRORSD1PA6NEY8 169 aa13.17□□□□□ -0.3
SNX29-203ENST00000564111 NR5A2O00482 541 aa13.17□□□□□ -0.3
SNX29-203ENST00000564111 GCM2O75603 506 aaPredicted RBP13.17□□□□□ -0.3
SNX29-203ENST00000564111 GPIP06744 558 aa13.17□□□□□ -0.3
SNX29-203ENST00000564111 IDUAP35475 653 aa13.17□□□□□ -0.3
SNX29-203ENST00000564111 OR2B6P58173 313 aa13.17□□□□□ -0.3
SNX29-203ENST00000564111 ZNF836Q6ZNA1 936 aa13.17□□□□□ -0.3
SNX29-203ENST00000564111 CXorf67Q86X51 503 aaPredicted RBP13.17□□□□□ -0.3
SNX29-203ENST00000564111 ADGRG3Q86Y34 549 aa13.17□□□□□ -0.3
SNX29-203ENST00000564111 ZBTB9Q96C00 473 aa13.17□□□□□ -0.3
SNX29-203ENST00000564111 ADAM19Q9H013 955 aa13.17□□□□□ -0.3
SNX29-203ENST00000564111 ESRP2Q9H6T0 727 aaKnown RBP13.17□□□□□ -0.3
SNX29-203ENST00000564111 LEF1Q9UJU2 399 aaPredicted RBP13.17□□□□□ -0.3
SNX29-203ENST00000564111 PCDHB14Q9Y5E9 798 aa13.17□□□□□ -0.3
SNX29-203ENST00000564111 RAI1Q7Z5J4 1906 aaPredicted RBP13.17□□□□□ -0.3
SNX29-203ENST00000564111 SMPD2O60906 423 aa13.16□□□□□ -0.3
SNX29-203ENST00000564111 CD53P19397 219 aa13.16□□□□□ -0.3
SNX29-203ENST00000564111 NCF2P19878 526 aaPredicted RBP13.16□□□□□ -0.3
SNX29-203ENST00000564111 TACR3P29371 465 aa13.16□□□□□ -0.3
SNX29-203ENST00000564111 PRKAR1BP31321 381 aa13.16□□□□□ -0.3
SNX29-203ENST00000564111 POU4F3Q15319 338 aa13.16□□□□□ -0.3
SNX29-203ENST00000564111 KRTAP21-3Q3LHN1 58 aa13.16□□□□□ -0.3
SNX29-203ENST00000564111 METTL21CQ5VZV1 264 aa13.16□□□□□ -0.3
SNX29-203ENST00000564111 BHLHA15Q7RTS1 189 aaPredicted RBP13.16□□□□□ -0.3
SNX29-203ENST00000564111 NUFIP2Q7Z417 695 aaKnown RBP13.16□□□□□ -0.3
SNX29-203ENST00000564111 STK35Q8TDR2 534 aa13.16□□□□□ -0.3
SNX29-203ENST00000564111 VPS33AQ96AX1 596 aa13.16□□□□□ -0.3
SNX29-203ENST00000564111 APH1AQ96BI3 265 aa13.16□□□□□ -0.3
SNX29-203ENST00000564111 ZNF607Q96SK3 696 aa13.16□□□□□ -0.3
SNX29-203ENST00000564111 SF3B5Q9BWJ5 86 aaKnown RBP13.16□□□□□ -0.3
SNX29-203ENST00000564111 TAPBPLQ9BX59 468 aa13.16□□□□□ -0.3
SNX29-203ENST00000564111 C6orf203Q9P0P8 240 aaPredicted RBP13.16□□□□□ -0.3
SNX29-203ENST00000564111 OSGIN1Q9UJX0 560 aa13.16□□□□□ -0.3
SNX29-203ENST00000564111 NOSIPQ9Y314 301 aaKnown RBP13.16□□□□□ -0.3
SNX29-203ENST00000564111 ARAFP10398 606 aa13.16□□□□□ -0.3
SNX29-203ENST00000564111 CD99P14209 185 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms