RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 CYLC2Q14093 348 aaPredicted RBP3.5□□□□□ -1.85
ATXN3-217ENST00000553287 STK38Q15208 465 aa3.5□□□□□ -1.85
ATXN3-217ENST00000553287 Q1RN00 199 aa3.5□□□□□ -1.85
ATXN3-217ENST00000553287 SHEQ5VZ18 495 aa3.5□□□□□ -1.85
ATXN3-217ENST00000553287 TXNRD3NBQ6F5E7 133 aa3.5□□□□□ -1.85
ATXN3-217ENST00000553287 KLHL10Q6JEL2 608 aa3.5□□□□□ -1.85
ATXN3-217ENST00000553287 TMEM182Q6ZP80 229 aaPredicted RBP3.5□□□□□ -1.85
ATXN3-217ENST00000553287 FAM183BPQ6ZVS7 135 aa3.5□□□□□ -1.85
ATXN3-217ENST00000553287 MEX3DQ86XN8 651 aaKnown RBP3.5□□□□□ -1.85
ATXN3-217ENST00000553287 LRRC49Q8IUZ0 686 aa3.5□□□□□ -1.85
ATXN3-217ENST00000553287 TIGD4Q8IY51 512 aa3.5□□□□□ -1.85
ATXN3-217ENST00000553287 DCAF4L2Q8NA75 395 aa3.5□□□□□ -1.85
ATXN3-217ENST00000553287 CCDC112Q8NEF3 446 aa3.5□□□□□ -1.85
ATXN3-217ENST00000553287 OR6C4Q8NGE1 309 aa3.5□□□□□ -1.85
ATXN3-217ENST00000553287 KIAA1524Q8TCG1 905 aa3.5□□□□□ -1.85
ATXN3-217ENST00000553287 SLC37A2Q8TED4 501 aa3.5□□□□□ -1.85
ATXN3-217ENST00000553287 PCNPQ8WW12 178 aaKnown RBP3.5□□□□□ -1.85
ATXN3-217ENST00000553287 SMPDL3AQ92484 453 aa3.5□□□□□ -1.85
ATXN3-217ENST00000553287 NRGNQ92686 78 aa3.5□□□□□ -1.85
ATXN3-217ENST00000553287 RIT1Q92963 219 aa3.5□□□□□ -1.85
ATXN3-217ENST00000553287 SMIM14Q96QK8 99 aa3.5□□□□□ -1.85
ATXN3-217ENST00000553287 SMR3AQ99954 134 aa3.5□□□□□ -1.85
ATXN3-217ENST00000553287 APOL2Q9BQE5 337 aa3.5□□□□□ -1.85
ATXN3-217ENST00000553287 INPP5KQ9BT40 448 aa3.5□□□□□ -1.85
ATXN3-217ENST00000553287 PINK1Q9BXM7 581 aa3.5□□□□□ -1.85
ATXN3-217ENST00000553287 ING2Q9H160 280 aa3.5□□□□□ -1.85
ATXN3-217ENST00000553287 SP140LQ9H930 580 aa3.5□□□□□ -1.85
ATXN3-217ENST00000553287 POPDC2Q9HBU9 364 aa3.5□□□□□ -1.85
ATXN3-217ENST00000553287 CLEC5AQ9NY25 188 aa3.5□□□□□ -1.85
ATXN3-217ENST00000553287 SH3BGRL2Q9UJC5 107 aa3.5□□□□□ -1.85
ATXN3-217ENST00000553287 ZNF346Q9UL40 294 aaKnown RBP3.5□□□□□ -1.85
ATXN3-217ENST00000553287 DOCK4Q8N1I0 1966 aa3.49□□□□□ -1.85
ATXN3-217ENST00000553287 A0A0B4J203 849 aa3.49□□□□□ -1.85
ATXN3-217ENST00000553287 CACNB4O00305 520 aaPredicted RBP3.49□□□□□ -1.85
ATXN3-217ENST00000553287 PDXKO00764 312 aa3.49□□□□□ -1.85
ATXN3-217ENST00000553287 CALUO43852 315 aaPredicted RBP3.49□□□□□ -1.85
ATXN3-217ENST00000553287 ALOX12BO75342 701 aa3.49□□□□□ -1.85
ATXN3-217ENST00000553287 SPAG6O75602 509 aa3.49□□□□□ -1.85
ATXN3-217ENST00000553287 LETM1O95202 739 aaPredicted RBP3.49□□□□□ -1.85
ATXN3-217ENST00000553287 VENTXO95231 258 aa3.49□□□□□ -1.85
ATXN3-217ENST00000553287 VIMP08670 466 aaKnown RBP3.49□□□□□ -1.85
ATXN3-217ENST00000553287 PNMA6AP0CW24 399 aaPredicted RBP3.49□□□□□ -1.85
ATXN3-217ENST00000553287 KRT3P12035 628 aa3.49□□□□□ -1.85
ATXN3-217ENST00000553287 ACTR1BP42025 376 aa3.49□□□□□ -1.85
ATXN3-217ENST00000553287 RGRP47804 291 aa3.49□□□□□ -1.85
ATXN3-217ENST00000553287 RPL34P49207 117 aaKnown RBP3.49□□□□□ -1.85
ATXN3-217ENST00000553287 SULT1E1P49888 294 aa3.49□□□□□ -1.85
ATXN3-217ENST00000553287 CAPZA1P52907 286 aa3.49□□□□□ -1.85
ATXN3-217ENST00000553287 KCNK10P57789 538 aa3.49□□□□□ -1.85
ATXN3-217ENST00000553287 ACTR1AP61163 376 aa3.49□□□□□ -1.85
ATXN3-217ENST00000553287 SNRPFP62306 86 aaKnown RBP3.49□□□□□ -1.85
ATXN3-217ENST00000553287 GNA12Q03113 381 aa3.49□□□□□ -1.85
ATXN3-217ENST00000553287 CHRNA6Q15825 494 aa3.49□□□□□ -1.85
ATXN3-217ENST00000553287 TMEM52BQ4KMG9 183 aa3.49□□□□□ -1.85
ATXN3-217ENST00000553287 ARMCX4Q5H9R4 360 aa3.49□□□□□ -1.85
ATXN3-217ENST00000553287 NHLRC3Q5JS37 347 aa3.49□□□□□ -1.85
ATXN3-217ENST00000553287 TEX35Q5T0J7 233 aa3.49□□□□□ -1.85
ATXN3-217ENST00000553287 OLFML2AQ68BL7 652 aa3.49□□□□□ -1.85
ATXN3-217ENST00000553287 CCBE1Q6UXH8 406 aaPredicted RBP3.49□□□□□ -1.85
ATXN3-217ENST00000553287 FAM92BQ6ZTR7 304 aa3.49□□□□□ -1.85
ATXN3-217ENST00000553287 NCCRP1Q6ZVX7 275 aaPredicted RBP3.49□□□□□ -1.85
ATXN3-217ENST00000553287 C17orf82Q86X59 251 aaPredicted RBP3.49□□□□□ -1.85
ATXN3-217ENST00000553287 SLC34A3Q8N130 599 aa3.49□□□□□ -1.85
ATXN3-217ENST00000553287 SLC43A2Q8N370 569 aa3.49□□□□□ -1.85
ATXN3-217ENST00000553287 CCDC89Q8N998 374 aa3.49□□□□□ -1.85
ATXN3-217ENST00000553287 OR2AP1Q8NGE2 309 aa3.49□□□□□ -1.85
ATXN3-217ENST00000553287 SLC35C1Q96A29 364 aa3.49□□□□□ -1.85
ATXN3-217ENST00000553287 BSCL2Q96G97 398 aaPredicted RBP3.49□□□□□ -1.85
ATXN3-217ENST00000553287 PAGE5Q96GU1 130 aa3.49□□□□□ -1.85
ATXN3-217ENST00000553287 TGM7Q96PF1 710 aa3.49□□□□□ -1.85
ATXN3-217ENST00000553287 RCHY1Q96PM5 261 aa3.49□□□□□ -1.85
ATXN3-217ENST00000553287 RAB3IPQ96QF0 476 aaPredicted RBP3.49□□□□□ -1.85
ATXN3-217ENST00000553287 CPXM1Q96SM3 734 aa3.49□□□□□ -1.85
ATXN3-217ENST00000553287 FBXO8Q9NRD0 319 aa3.49□□□□□ -1.85
ATXN3-217ENST00000553287 CHCHD3Q9NX63 227 aaKnown RBP3.49□□□□□ -1.85
ATXN3-217ENST00000553287 CGNQ9P2M7 1197 aaKnown RBP3.49□□□□□ -1.85
ATXN3-217ENST00000553287 CD84Q9UIB8 345 aa3.49□□□□□ -1.85
ATXN3-217ENST00000553287 ANAPC5Q9UJX4 755 aa3.49□□□□□ -1.85
ATXN3-217ENST00000553287 NOCTQ9UK39 431 aaKnown RBP3.49□□□□□ -1.85
ATXN3-217ENST00000553287 MGAT4AQ9UM21 535 aa3.49□□□□□ -1.85
ATXN3-217ENST00000553287 SPATA2Q9UM82 520 aa3.49□□□□□ -1.85
ATXN3-217ENST00000553287 DIDO1Q9BTC0 2240 aaKnown RBP3.49□□□□□ -1.85
ATXN3-217ENST00000553287 SPG11Q96JI7 2443 aa3.49□□□□□ -1.85
ATXN3-217ENST00000553287 PRRC2AP48634 2157 aaKnown RBP3.48□□□□□ -1.85
ATXN3-217ENST00000553287 HRNRQ86YZ3 2850 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-217ENST00000553287 LOC390937A0A1W2PQ73 354 aa3.48□□□□□ -1.85
ATXN3-217ENST00000553287 ILVBLA1L0T0 632 aa3.48□□□□□ -1.85
ATXN3-217ENST00000553287 C5orf52A6NGY3 159 aa3.48□□□□□ -1.85
ATXN3-217ENST00000553287 TMEM110-MUSTN1A8MSY1 372 aa3.48□□□□□ -1.85
ATXN3-217ENST00000553287 E2F3O00716 465 aa3.48□□□□□ -1.85
ATXN3-217ENST00000553287 FBP2O00757 339 aa3.48□□□□□ -1.85
ATXN3-217ENST00000553287 BUB1O43683 1085 aa3.48□□□□□ -1.85
ATXN3-217ENST00000553287 DPM1O60762 260 aa3.48□□□□□ -1.85
ATXN3-217ENST00000553287 LCA5LO95447 670 aa3.48□□□□□ -1.85
ATXN3-217ENST00000553287 PLEKP08567 350 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-217ENST00000553287 FAM58BPP0C7Q3 252 aa3.48□□□□□ -1.85
ATXN3-217ENST00000553287 COX6B1P14854 86 aa3.48□□□□□ -1.85
ATXN3-217ENST00000553287 FOLR1P15328 257 aa3.48□□□□□ -1.85
ATXN3-217ENST00000553287 SYT1P21579 422 aa3.48□□□□□ -1.85
ATXN3-217ENST00000553287 HTR1EP28566 365 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms