RNA–Protein interactions for RNA: ENST00000548247.1

RACGAP1-211, Transcript of Rac GTPase activating protein 1, human

TSL 4

Gene RACGAP1, Length 564 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-211	ENST00000548247	TOR1AIP2	Q8NFQ8	470 aa		11.65	□□□□□ -0.54
RACGAP1-211	ENST00000548247	OR5W2	Q8NH69	310 aa		11.65	□□□□□ -0.54
RACGAP1-211	ENST00000548247	C10orf105	Q8TEF2	133 aa		11.65	□□□□□ -0.54
RACGAP1-211	ENST00000548247	CPNE4	Q96A23	557 aa	Predicted RBP	11.65	□□□□□ -0.54
RACGAP1-211	ENST00000548247	ZNF524	Q96C55	264 aa		11.65	□□□□□ -0.54
RACGAP1-211	ENST00000548247	C1orf159	Q96HA4	380 aa		11.65	□□□□□ -0.54
RACGAP1-211	ENST00000548247	MRGPRX4	Q96LA9	322 aa		11.65	□□□□□ -0.54
RACGAP1-211	ENST00000548247	ZNF350	Q9GZX5	532 aa		11.65	□□□□□ -0.54
RACGAP1-211	ENST00000548247	TIGAR	Q9NQ88	270 aa		11.65	□□□□□ -0.54
RACGAP1-211	ENST00000548247	EXD2	Q9NVH0	621 aa		11.65	□□□□□ -0.54
RACGAP1-211	ENST00000548247	FAIM	Q9NVQ4	179 aa		11.65	□□□□□ -0.54
RACGAP1-211	ENST00000548247	MKLN1	Q9UL63	735 aa		11.65	□□□□□ -0.54
RACGAP1-211	ENST00000548247	CENPVL1	A0A0U1RR11	272 aa		11.64	□□□□□ -0.55
RACGAP1-211	ENST00000548247	TMEM120B	A0PK00	339 aa		11.64	□□□□□ -0.55
RACGAP1-211	ENST00000548247		E9PBE3	544 aa		11.64	□□□□□ -0.55
RACGAP1-211	ENST00000548247	UGT2B17	O75795	530 aa		11.64	□□□□□ -0.55
RACGAP1-211	ENST00000548247	ADA	P00813	363 aa		11.64	□□□□□ -0.55
RACGAP1-211	ENST00000548247	ALDOC	P09972	364 aa	Known RBP	11.64	□□□□□ -0.55
RACGAP1-211	ENST00000548247	OR12D1	P0DN82	309 aa		11.64	□□□□□ -0.55
RACGAP1-211	ENST00000548247	NME5	P56597	212 aa		11.64	□□□□□ -0.55
RACGAP1-211	ENST00000548247	WDR4	P57081	412 aa	Known RBP	11.64	□□□□□ -0.55
RACGAP1-211	ENST00000548247	LSM11	P83369	360 aa	Known RBP eCLIP	11.64	□□□□□ -0.55
RACGAP1-211	ENST00000548247	SKP2	Q13309	424 aa		11.64	□□□□□ -0.55
RACGAP1-211	ENST00000548247	QPRT	Q15274	297 aa		11.64	□□□□□ -0.55
RACGAP1-211	ENST00000548247	DPY19L1	Q2PZI1	675 aa		11.64	□□□□□ -0.55
RACGAP1-211	ENST00000548247	FAM174B	Q3ZCQ3	159 aa		11.64	□□□□□ -0.55
RACGAP1-211	ENST00000548247	SLC25A53	Q5H9E4	307 aa		11.64	□□□□□ -0.55
RACGAP1-211	ENST00000548247	ATAD3B	Q5T9A4	648 aa		11.64	□□□□□ -0.55
RACGAP1-211	ENST00000548247	AGAP6	Q5VW22	663 aa		11.64	□□□□□ -0.55
RACGAP1-211	ENST00000548247	LIPN	Q5VXI9	398 aa		11.64	□□□□□ -0.55
RACGAP1-211	ENST00000548247	SAXO2	Q658L1	398 aa		11.64	□□□□□ -0.55
RACGAP1-211	ENST00000548247	OGFOD2	Q6N063	350 aa		11.64	□□□□□ -0.55
RACGAP1-211	ENST00000548247	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	11.64	□□□□□ -0.55
RACGAP1-211	ENST00000548247	ATP6V1C2	Q8NEY4	427 aa		11.64	□□□□□ -0.55
RACGAP1-211	ENST00000548247	MGARP	Q8TDB4	240 aa		11.64	□□□□□ -0.55
RACGAP1-211	ENST00000548247	RNF128	Q8TEB7	428 aa		11.64	□□□□□ -0.55
RACGAP1-211	ENST00000548247	ABHD3	Q8WU67	409 aa		11.64	□□□□□ -0.55
RACGAP1-211	ENST00000548247	XAGE5	Q8WWM1	108 aa		11.64	□□□□□ -0.55
RACGAP1-211	ENST00000548247	FAM168A	Q92567	244 aa		11.64	□□□□□ -0.55
RACGAP1-211	ENST00000548247	RAB8B	Q92930	207 aa		11.64	□□□□□ -0.55
RACGAP1-211	ENST00000548247	KISS1R	Q969F8	398 aa	Predicted RBP	11.64	□□□□□ -0.55
RACGAP1-211	ENST00000548247	REXO5	Q96IC2	774 aa	Known RBP	11.64	□□□□□ -0.55
RACGAP1-211	ENST00000548247	TEX37	Q96LM6	180 aa		11.64	□□□□□ -0.55
RACGAP1-211	ENST00000548247	SRXN1	Q9BYN0	137 aa		11.64	□□□□□ -0.55
RACGAP1-211	ENST00000548247	LAT2	Q9GZY6	243 aa		11.64	□□□□□ -0.55
RACGAP1-211	ENST00000548247	NPAP1	Q9NZP6	1156 aa		11.64	□□□□□ -0.55
RACGAP1-211	ENST00000548247	KCNS2	Q9ULS6	477 aa		11.64	□□□□□ -0.55
RACGAP1-211	ENST00000548247	LOC100289279	A0A1B0GTE1	492 aa		11.63	□□□□□ -0.55
RACGAP1-211	ENST00000548247	ZNF814	B7Z6K7	855 aa		11.63	□□□□□ -0.55
RACGAP1-211	ENST00000548247	ETV2	O00321	342 aa	Predicted RBP	11.63	□□□□□ -0.55
RACGAP1-211	ENST00000548247	SDHD	O14521	159 aa		11.63	□□□□□ -0.55
RACGAP1-211	ENST00000548247	ABCD4	O14678	606 aa		11.63	□□□□□ -0.55
RACGAP1-211	ENST00000548247	SNN	O75324	88 aa	Predicted RBP	11.63	□□□□□ -0.55
RACGAP1-211	ENST00000548247	CYP7B1	O75881	506 aa		11.63	□□□□□ -0.55
RACGAP1-211	ENST00000548247	AGR2	O95994	175 aa		11.63	□□□□□ -0.55
RACGAP1-211	ENST00000548247	CSTA	P01040	98 aa		11.63	□□□□□ -0.55
RACGAP1-211	ENST00000548247	GUSB	P08236	651 aa		11.63	□□□□□ -0.55
RACGAP1-211	ENST00000548247	USF1	P22415	310 aa	Predicted RBP	11.63	□□□□□ -0.55
RACGAP1-211	ENST00000548247	S100A3	P33764	101 aa		11.63	□□□□□ -0.55
RACGAP1-211	ENST00000548247	TTK	P33981	857 aa		11.63	□□□□□ -0.55
RACGAP1-211	ENST00000548247	CHI3L1	P36222	383 aa	Predicted RBP	11.63	□□□□□ -0.55
RACGAP1-211	ENST00000548247	UFM1	P61960	85 aa		11.63	□□□□□ -0.55
RACGAP1-211	ENST00000548247	SELENBP1	Q13228	472 aa		11.63	□□□□□ -0.55
RACGAP1-211	ENST00000548247	ITGAD	Q13349	1161 aa		11.63	□□□□□ -0.55
RACGAP1-211	ENST00000548247	P2RY6	Q15077	328 aa		11.63	□□□□□ -0.55
RACGAP1-211	ENST00000548247	RAB35	Q15286	201 aa		11.63	□□□□□ -0.55
RACGAP1-211	ENST00000548247	RNPS1	Q15287	305 aa	Known RBP	11.63	□□□□□ -0.55
RACGAP1-211	ENST00000548247	MAPK14	Q16539	360 aa		11.63	□□□□□ -0.55
RACGAP1-211	ENST00000548247	TMEM201	Q5SNT2	666 aa		11.63	□□□□□ -0.55
RACGAP1-211	ENST00000548247	FAM166A	Q6J272	317 aa		11.63	□□□□□ -0.55
RACGAP1-211	ENST00000548247	EIF3M	Q7L2H7	374 aa	Known RBP	11.63	□□□□□ -0.55
RACGAP1-211	ENST00000548247	FCRLA	Q7L513	359 aa		11.63	□□□□□ -0.55
RACGAP1-211	ENST00000548247	SPATA19	Q7Z5L4	167 aa		11.63	□□□□□ -0.55
RACGAP1-211	ENST00000548247	TUSC5	Q8IXB3	177 aa		11.63	□□□□□ -0.55
RACGAP1-211	ENST00000548247	ZFP90	Q8TF47	636 aa		11.63	□□□□□ -0.55
RACGAP1-211	ENST00000548247	PROX1	Q92786	737 aa		11.63	□□□□□ -0.55
RACGAP1-211	ENST00000548247	MSI2	Q96DH6	328 aa	Known RBP	11.63	□□□□□ -0.55
RACGAP1-211	ENST00000548247	NEURL3	Q96EH8	262 aa		11.63	□□□□□ -0.55
RACGAP1-211	ENST00000548247	CCDC115	Q96NT0	180 aa		11.63	□□□□□ -0.55
RACGAP1-211	ENST00000548247	SLC35A5	Q9BS91	424 aa		11.63	□□□□□ -0.55
RACGAP1-211	ENST00000548247	THUMPD3	Q9BV44	507 aa	Known RBP	11.63	□□□□□ -0.55
RACGAP1-211	ENST00000548247	POTEKP	Q9BYX7	375 aa		11.63	□□□□□ -0.55
RACGAP1-211	ENST00000548247	ADAM19	Q9H013	955 aa		11.63	□□□□□ -0.55
RACGAP1-211	ENST00000548247	QRSL1	Q9H0R6	528 aa	Known RBP	11.63	□□□□□ -0.55
RACGAP1-211	ENST00000548247	COQ10B	Q9H8M1	238 aa		11.63	□□□□□ -0.55
RACGAP1-211	ENST00000548247	AIG1	Q9NVV5	245 aa		11.63	□□□□□ -0.55
RACGAP1-211	ENST00000548247	THAP1	Q9NVV9	213 aa		11.63	□□□□□ -0.55
RACGAP1-211	ENST00000548247	MARCO	Q9UEW3	520 aa	Predicted RBP	11.63	□□□□□ -0.55
RACGAP1-211	ENST00000548247	BTNL2	Q9UIR0	455 aa		11.63	□□□□□ -0.55
RACGAP1-211	ENST00000548247	TRRAP	Q9Y4A5	3859 aa		11.62	□□□□□ -0.55
RACGAP1-211	ENST00000548247	GOLGA8Q	A0A0J9YX86	632 aa		11.62	□□□□□ -0.55
RACGAP1-211	ENST00000548247		A0A1W2PNR3	127 aa		11.62	□□□□□ -0.55
RACGAP1-211	ENST00000548247	GOLGA8O	A6NCC3	632 aa		11.62	□□□□□ -0.55
RACGAP1-211	ENST00000548247		C9JVG2	144 aa		11.62	□□□□□ -0.55
RACGAP1-211	ENST00000548247		E7EQL1	145 aa		11.62	□□□□□ -0.55
RACGAP1-211	ENST00000548247	GOLGA8N	F8WBI6	632 aa		11.62	□□□□□ -0.55
RACGAP1-211	ENST00000548247	HDAC3	O15379	428 aa		11.62	□□□□□ -0.55
RACGAP1-211	ENST00000548247	KIAA0513	O60268	411 aa		11.62	□□□□□ -0.55
RACGAP1-211	ENST00000548247	DNAJA2	O60884	412 aa		11.62	□□□□□ -0.55
RACGAP1-211	ENST00000548247	LY6H	O94772	140 aa		11.62	□□□□□ -0.55

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