RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 RRP8O43159 456 aaKnown RBP16.96■□□□□ 0.31
SFSWAP-203ENST00000535236 AFF3P51826 1226 aaKnown RBP16.96■□□□□ 0.31
SFSWAP-203ENST00000535236 BLOC1S1P78537 153 aa16.96■□□□□ 0.31
SFSWAP-203ENST00000535236 MS4A2Q01362 244 aa16.96■□□□□ 0.31
SFSWAP-203ENST00000535236 SYPL1Q16563 259 aa16.96■□□□□ 0.31
SFSWAP-203ENST00000535236 RNF175Q8N4F7 328 aa16.96■□□□□ 0.31
SFSWAP-203ENST00000535236 ACSS1Q9NUB1 689 aaPredicted RBP16.96■□□□□ 0.31
SFSWAP-203ENST00000535236 ADAM29Q9UKF5 820 aa16.96■□□□□ 0.31
SFSWAP-203ENST00000535236 AP1G1O43747 822 aa16.96■□□□□ 0.31
SFSWAP-203ENST00000535236 TCN2P20062 427 aa16.96■□□□□ 0.31
SFSWAP-203ENST00000535236 TANGO2Q6ICL3 276 aa16.96■□□□□ 0.31
SFSWAP-203ENST00000535236 OR1J2Q8NGS2 313 aa16.96■□□□□ 0.31
SFSWAP-203ENST00000535236 C7orf50Q9BRJ6 194 aaKnown RBP16.96■□□□□ 0.31
SFSWAP-203ENST00000535236 GPR137BO60478 399 aa16.96■□□□□ 0.31
SFSWAP-203ENST00000535236 INHBCP55103 352 aa16.96■□□□□ 0.31
SFSWAP-203ENST00000535236 RPS18P62269 152 aaKnown RBP16.96■□□□□ 0.31
SFSWAP-203ENST00000535236 SNRPD2P62316 118 aaKnown RBP16.96■□□□□ 0.31
SFSWAP-203ENST00000535236 TNFRSF17Q02223 184 aa16.96■□□□□ 0.31
SFSWAP-203ENST00000535236 MSMO1Q15800 293 aa16.96■□□□□ 0.31
SFSWAP-203ENST00000535236 ZNF684Q5T5D7 378 aa16.96■□□□□ 0.31
SFSWAP-203ENST00000535236 PRAMEF20Q5VT98 475 aa16.96■□□□□ 0.31
SFSWAP-203ENST00000535236 OR6F1Q8NGZ6 308 aa16.96■□□□□ 0.31
SFSWAP-203ENST00000535236 BRIX1Q8TDN6 353 aaKnown RBP16.96■□□□□ 0.31
SFSWAP-203ENST00000535236 ZNF566Q969W8 418 aa16.96■□□□□ 0.31
SFSWAP-203ENST00000535236 THAP7Q9BT49 309 aaPredicted RBP16.96■□□□□ 0.31
SFSWAP-203ENST00000535236 CLMPQ9H6B4 373 aa16.96■□□□□ 0.31
SFSWAP-203ENST00000535236 OLAHQ9NV23 265 aa16.96■□□□□ 0.31
SFSWAP-203ENST00000535236 NME7Q9Y5B8 376 aa16.96■□□□□ 0.31
SFSWAP-203ENST00000535236 HSBP1L1C9JCN9 74 aa16.96■□□□□ 0.3
SFSWAP-203ENST00000535236 F13BP05160 661 aa16.96■□□□□ 0.3
SFSWAP-203ENST00000535236 HTR2BP41595 481 aa16.96■□□□□ 0.3
SFSWAP-203ENST00000535236 RGRP47804 291 aa16.96■□□□□ 0.3
SFSWAP-203ENST00000535236 FBXW12Q6X9E4 464 aa16.96■□□□□ 0.3
SFSWAP-203ENST00000535236 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.96■□□□□ 0.3
SFSWAP-203ENST00000535236 INTS6Q9UL03 887 aaKnown RBP16.96■□□□□ 0.3
SFSWAP-203ENST00000535236 YKT6O15498 198 aa16.95■□□□□ 0.3
SFSWAP-203ENST00000535236 ADAM12O43184 909 aa16.95■□□□□ 0.3
SFSWAP-203ENST00000535236 GPR39O43194 453 aa16.95■□□□□ 0.3
SFSWAP-203ENST00000535236 SLC5A2P31639 672 aa16.95■□□□□ 0.3
SFSWAP-203ENST00000535236 COMMD7Q86VX2 200 aa16.95■□□□□ 0.3
SFSWAP-203ENST00000535236 ZNF679Q8IYX0 411 aa16.95■□□□□ 0.3
SFSWAP-203ENST00000535236 GORASP2Q9H8Y8 452 aa16.95■□□□□ 0.3
SFSWAP-203ENST00000535236 NXT1Q9UKK6 140 aaKnown RBP16.95■□□□□ 0.3
SFSWAP-203ENST00000535236 TSFMP43897 325 aaKnown RBP16.95■□□□□ 0.3
SFSWAP-203ENST00000535236 PDE7AQ13946 482 aa16.95■□□□□ 0.3
SFSWAP-203ENST00000535236 LTB4RQ15722 352 aa16.95■□□□□ 0.3
SFSWAP-203ENST00000535236 MARCH8Q5T0T0 291 aa16.95■□□□□ 0.3
SFSWAP-203ENST00000535236 ZNF775Q96BV0 537 aaPredicted RBP16.95■□□□□ 0.3
SFSWAP-203ENST00000535236 UPRTQ96BW1 309 aa16.95■□□□□ 0.3
SFSWAP-203ENST00000535236 SLC25A31Q9H0C2 315 aa16.95■□□□□ 0.3
SFSWAP-203ENST00000535236 ZNF286AQ9HBT8 521 aa16.95■□□□□ 0.3
SFSWAP-203ENST00000535236 USP3Q9Y6I4 520 aa16.95■□□□□ 0.3
SFSWAP-203ENST00000535236 RAB4AP20338 218 aa16.95■□□□□ 0.3
SFSWAP-203ENST00000535236 CXADRP78310 365 aa16.95■□□□□ 0.3
SFSWAP-203ENST00000535236 SLC14A1Q13336 389 aa16.95■□□□□ 0.3
SFSWAP-203ENST00000535236 GPR176Q14439 515 aa16.95■□□□□ 0.3
SFSWAP-203ENST00000535236 SF3A2Q15428 464 aaKnown RBP16.95■□□□□ 0.3
SFSWAP-203ENST00000535236 MRPL2Q5T653 305 aaKnown RBP16.95■□□□□ 0.3
SFSWAP-203ENST00000535236 SLC35F3Q8IY50 421 aa16.95■□□□□ 0.3
SFSWAP-203ENST00000535236 UCN3Q969E3 161 aa16.95■□□□□ 0.3
SFSWAP-203ENST00000535236 ELMOD3Q96FG2 381 aa16.95■□□□□ 0.3
SFSWAP-203ENST00000535236 MYOTQ9UBF9 498 aa16.95■□□□□ 0.3
SFSWAP-203ENST00000535236 IL13RA1P78552 427 aa16.95■□□□□ 0.3
SFSWAP-203ENST00000535236 LTC4SQ16873 150 aa16.95■□□□□ 0.3
SFSWAP-203ENST00000535236 SLX4IPQ5VYV7 408 aa16.95■□□□□ 0.3
SFSWAP-203ENST00000535236 MISPQ8IVT2 679 aa16.95■□□□□ 0.3
SFSWAP-203ENST00000535236 SLC15A4Q8N697 577 aa16.95■□□□□ 0.3
SFSWAP-203ENST00000535236 SLC41A2Q96JW4 573 aa16.95■□□□□ 0.3
SFSWAP-203ENST00000535236 SMIM14Q96QK8 99 aa16.95■□□□□ 0.3
SFSWAP-203ENST00000535236 NDUFAF4Q9P032 175 aa16.95■□□□□ 0.3
SFSWAP-203ENST00000535236 HCSTQ9UBK5 93 aa16.95■□□□□ 0.3
SFSWAP-203ENST00000535236 EDARQ9UNE0 448 aa16.95■□□□□ 0.3
SFSWAP-203ENST00000535236 METTL15A6NJ78 407 aa16.94■□□□□ 0.3
SFSWAP-203ENST00000535236 RNF212BA8MTL3 300 aa16.94■□□□□ 0.3
SFSWAP-203ENST00000535236 BCAS1O75363 584 aaPredicted RBP16.94■□□□□ 0.3
SFSWAP-203ENST00000535236 PTGER4P35408 488 aa16.94■□□□□ 0.3
SFSWAP-203ENST00000535236 MLF2Q15773 248 aaPredicted RBP16.94■□□□□ 0.3
SFSWAP-203ENST00000535236 DUSP7Q16829 419 aa16.94■□□□□ 0.3
SFSWAP-203ENST00000535236 COX15Q7KZN9 410 aa16.94■□□□□ 0.3
SFSWAP-203ENST00000535236 FNDC8Q8TC99 324 aa16.94■□□□□ 0.3
SFSWAP-203ENST00000535236 ADAMTS14Q8WXS8 1223 aa16.94■□□□□ 0.3
SFSWAP-203ENST00000535236 CMSS1Q9BQ75 279 aaKnown RBP16.94■□□□□ 0.3
SFSWAP-203ENST00000535236 PRSS16Q9NQE7 514 aa16.94■□□□□ 0.3
SFSWAP-203ENST00000535236 FAM183AA6NL82 134 aa16.94■□□□□ 0.3
SFSWAP-203ENST00000535236 TK1P04183 234 aa16.94■□□□□ 0.3
SFSWAP-203ENST00000535236 F2RL1P55085 397 aa16.94■□□□□ 0.3
SFSWAP-203ENST00000535236 NDUFAF7Q7L592 441 aa16.94■□□□□ 0.3
SFSWAP-203ENST00000535236 ARRDC2Q8TBH0 407 aa16.94■□□□□ 0.3
SFSWAP-203ENST00000535236 GPR45Q9Y5Y3 372 aa16.94■□□□□ 0.3
SFSWAP-203ENST00000535236 HLA-DMAP28067 261 aa16.94■□□□□ 0.3
SFSWAP-203ENST00000535236 SLC35A1P78382 337 aa16.94■□□□□ 0.3
SFSWAP-203ENST00000535236 CBLL1Q75N03 491 aa16.94■□□□□ 0.3
SFSWAP-203ENST00000535236 CD163Q86VB7 1156 aa16.94■□□□□ 0.3
SFSWAP-203ENST00000535236 RDH10Q8IZV5 341 aa16.94■□□□□ 0.3
SFSWAP-203ENST00000535236 METTL4Q8N3J2 472 aa16.94■□□□□ 0.3
SFSWAP-203ENST00000535236 DEDD2Q8WXF8 326 aa16.94■□□□□ 0.3
SFSWAP-203ENST00000535236 GAREM1Q9H706 876 aa16.94■□□□□ 0.3
SFSWAP-203ENST00000535236 A0A1B0GTW7 788 aa16.94■□□□□ 0.3
SFSWAP-203ENST00000535236 MTHFD2P13995 350 aa16.94■□□□□ 0.3
SFSWAP-203ENST00000535236 GNB3P16520 340 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms