RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 FAM214BQ7L5A3 538 aa12.48□□□□□ -0.41
DDX41-212ENST00000511040 ZNF550Q7Z398 422 aa12.48□□□□□ -0.41
DDX41-212ENST00000511040 KRT73Q86Y46 540 aa12.48□□□□□ -0.41
DDX41-212ENST00000511040 ZNF610Q8N9Z0 462 aa12.48□□□□□ -0.41
DDX41-212ENST00000511040 C11orf65Q8NCR3 313 aa12.48□□□□□ -0.41
DDX41-212ENST00000511040 HIPK4Q8NE63 616 aa12.48□□□□□ -0.41
DDX41-212ENST00000511040 OR10A6Q8NH74 314 aa12.48□□□□□ -0.41
DDX41-212ENST00000511040 LINC01560Q8TB33 94 aa12.48□□□□□ -0.41
DDX41-212ENST00000511040 RNF128Q8TEB7 428 aa12.48□□□□□ -0.41
DDX41-212ENST00000511040 SLC25A43Q8WUT9 341 aaPredicted RBP12.48□□□□□ -0.41
DDX41-212ENST00000511040 LRRC58Q96CX6 371 aa12.48□□□□□ -0.41
DDX41-212ENST00000511040 GMPPAQ96IJ6 420 aaPredicted RBP12.48□□□□□ -0.41
DDX41-212ENST00000511040 ARL5BQ96KC2 179 aa12.48□□□□□ -0.41
DDX41-212ENST00000511040 ZNF559Q9BR84 538 aa12.48□□□□□ -0.41
DDX41-212ENST00000511040 ARMC7Q9H6L4 198 aa12.48□□□□□ -0.41
DDX41-212ENST00000511040 C12orf49Q9H741 205 aa12.48□□□□□ -0.41
DDX41-212ENST00000511040 KAT8Q9H7Z6 458 aaKnown RBP12.48□□□□□ -0.41
DDX41-212ENST00000511040 NANOGQ9H9S0 305 aa12.48□□□□□ -0.41
DDX41-212ENST00000511040 PROCRQ9UNN8 238 aa12.48□□□□□ -0.41
DDX41-212ENST00000511040 ANGPT4Q9Y264 503 aa12.48□□□□□ -0.41
DDX41-212ENST00000511040 EMC9Q9Y3B6 208 aa12.48□□□□□ -0.41
DDX41-212ENST00000511040 SPIN1Q9Y657 262 aaPredicted RBP12.48□□□□□ -0.41
DDX41-212ENST00000511040 ZC3H12DA2A288 527 aaKnown RBP12.47□□□□□ -0.41
DDX41-212ENST00000511040 BBIP1A8MTZ0 92 aa12.47□□□□□ -0.41
DDX41-212ENST00000511040 SULT2B1O00204 365 aa12.47□□□□□ -0.41
DDX41-212ENST00000511040 FAAHO00519 579 aa12.47□□□□□ -0.41
DDX41-212ENST00000511040 SS18L1O75177 396 aaPredicted RBP12.47□□□□□ -0.41
DDX41-212ENST00000511040 CGAP01215 116 aa12.47□□□□□ -0.41
DDX41-212ENST00000511040 AGTR1P30556 359 aa12.47□□□□□ -0.41
DDX41-212ENST00000511040 SSTR2P30874 369 aa12.47□□□□□ -0.41
DDX41-212ENST00000511040 PRKAR1BP31321 381 aa12.47□□□□□ -0.41
DDX41-212ENST00000511040 HTR3AP46098 478 aa12.47□□□□□ -0.41
DDX41-212ENST00000511040 OR2B6P58173 313 aa12.47□□□□□ -0.41
DDX41-212ENST00000511040 RAC3P60763 192 aa12.47□□□□□ -0.41
DDX41-212ENST00000511040 FAM27E3Q08E93 113 aa12.47□□□□□ -0.41
DDX41-212ENST00000511040 BNIP2Q12982 314 aa12.47□□□□□ -0.41
DDX41-212ENST00000511040 WBP2NLQ6ICG8 309 aa12.47□□□□□ -0.41
DDX41-212ENST00000511040 TMPPEQ6ZT21 453 aa12.47□□□□□ -0.41
DDX41-212ENST00000511040 MTDHQ86UE4 582 aaKnown RBP12.47□□□□□ -0.41
DDX41-212ENST00000511040 KIF18BQ86Y91 864 aa12.47□□□□□ -0.41
DDX41-212ENST00000511040 TUSC5Q8IXB3 177 aa12.47□□□□□ -0.41
DDX41-212ENST00000511040 SMYD1Q8NB12 490 aa12.47□□□□□ -0.41
DDX41-212ENST00000511040 ZNF775Q96BV0 537 aaPredicted RBP12.47□□□□□ -0.41
DDX41-212ENST00000511040 RCN3Q96D15 328 aa12.47□□□□□ -0.41
DDX41-212ENST00000511040 SPATA5L1Q9BVQ7 753 aa12.47□□□□□ -0.41
DDX41-212ENST00000511040 PRR14Q9BWN1 585 aa12.47□□□□□ -0.41
DDX41-212ENST00000511040 ADAM19Q9H013 955 aa12.47□□□□□ -0.41
DDX41-212ENST00000511040 MRGBPQ9NV56 204 aa12.47□□□□□ -0.41
DDX41-212ENST00000511040 FAM53CQ9NYF3 392 aa12.47□□□□□ -0.41
DDX41-212ENST00000511040 KCNN3Q9UGI6 736 aa12.47□□□□□ -0.41
DDX41-212ENST00000511040 FOXD3Q9UJU5 478 aaPredicted RBP12.47□□□□□ -0.41
DDX41-212ENST00000511040 GMNCA6NCL1 334 aa12.46□□□□□ -0.41
DDX41-212ENST00000511040 TUBAL3A6NHL2 446 aa12.46□□□□□ -0.41
DDX41-212ENST00000511040 SMAD9O15198 467 aaKnown RBP12.46□□□□□ -0.41
DDX41-212ENST00000511040 CCDC22O60826 627 aa12.46□□□□□ -0.41
DDX41-212ENST00000511040 GCM2O75603 506 aaPredicted RBP12.46□□□□□ -0.41
DDX41-212ENST00000511040 OPN1SWP03999 348 aa12.46□□□□□ -0.41
DDX41-212ENST00000511040 ADSLP30566 484 aaPredicted RBP12.46□□□□□ -0.41
DDX41-212ENST00000511040 KCNJ5P48544 419 aa12.46□□□□□ -0.41
DDX41-212ENST00000511040 GZMMP51124 257 aa12.46□□□□□ -0.41
DDX41-212ENST00000511040 COPZ1P61923 177 aa12.46□□□□□ -0.41
DDX41-212ENST00000511040 DMTNQ08495 405 aa12.46□□□□□ -0.41
DDX41-212ENST00000511040 RNPS1Q15287 305 aaKnown RBP12.46□□□□□ -0.41
DDX41-212ENST00000511040 ZSWIM7Q19AV6 140 aa12.46□□□□□ -0.41
DDX41-212ENST00000511040 COQ5Q5HYK3 327 aa12.46□□□□□ -0.41
DDX41-212ENST00000511040 GTF2IRD2BQ6EKJ0 949 aa12.46□□□□□ -0.41
DDX41-212ENST00000511040 DHRS4L2Q6PKH6 230 aa12.46□□□□□ -0.41
DDX41-212ENST00000511040 NUFIP2Q7Z417 695 aaKnown RBP12.46□□□□□ -0.41
DDX41-212ENST00000511040 NET1Q7Z628 596 aaPredicted RBP12.46□□□□□ -0.41
DDX41-212ENST00000511040 CPLX4Q7Z7G2 160 aa12.46□□□□□ -0.41
DDX41-212ENST00000511040 GTF2IRD2Q86UP8 949 aa12.46□□□□□ -0.41
DDX41-212ENST00000511040 TREML1Q86YW5 311 aa12.46□□□□□ -0.41
DDX41-212ENST00000511040 ARMC8Q8IUR7 673 aa12.46□□□□□ -0.41
DDX41-212ENST00000511040 OR6K3Q8NGY3 331 aa12.46□□□□□ -0.41
DDX41-212ENST00000511040 C14orf79Q96F83 325 aa12.46□□□□□ -0.41
DDX41-212ENST00000511040 ZNF607Q96SK3 696 aa12.46□□□□□ -0.41
DDX41-212ENST00000511040 GLRX2Q9NS18 164 aa12.46□□□□□ -0.41
DDX41-212ENST00000511040 USP22Q9UPT9 525 aa12.46□□□□□ -0.41
DDX41-212ENST00000511040 FBN2P35556 2912 aa12.46□□□□□ -0.42
DDX41-212ENST00000511040 M0QX08 132 aa12.45□□□□□ -0.42
DDX41-212ENST00000511040 AIM2O14862 343 aa12.45□□□□□ -0.42
DDX41-212ENST00000511040 SLC22A2O15244 555 aa12.45□□□□□ -0.42
DDX41-212ENST00000511040 SERPINB7O75635 380 aa12.45□□□□□ -0.42
DDX41-212ENST00000511040 PRKD3O94806 890 aa12.45□□□□□ -0.42
DDX41-212ENST00000511040 MFN2O95140 757 aa12.45□□□□□ -0.42
DDX41-212ENST00000511040 CD8BP10966 210 aa12.45□□□□□ -0.42
DDX41-212ENST00000511040 IMPDH2P12268 514 aa12.45□□□□□ -0.42
DDX41-212ENST00000511040 COX4I1P13073 169 aa12.45□□□□□ -0.42
DDX41-212ENST00000511040 POU2F1P14859 743 aa12.45□□□□□ -0.42
DDX41-212ENST00000511040 CXCR1P25024 350 aa12.45□□□□□ -0.42
DDX41-212ENST00000511040 HTR2AP28223 471 aa12.45□□□□□ -0.42
DDX41-212ENST00000511040 PCGF2P35227 344 aa12.45□□□□□ -0.42
DDX41-212ENST00000511040 PCBP3P57721 371 aaKnown RBP12.45□□□□□ -0.42
DDX41-212ENST00000511040 CSNK2A1P68400 391 aaPredicted RBP12.45□□□□□ -0.42
DDX41-212ENST00000511040 RBBP4Q09028 425 aa12.45□□□□□ -0.42
DDX41-212ENST00000511040 RASGEF1BQ0VAM2 473 aa12.45□□□□□ -0.42
DDX41-212ENST00000511040 TMEM201Q5SNT2 666 aa12.45□□□□□ -0.42
DDX41-212ENST00000511040 PCYOX1LQ8NBM8 494 aa12.45□□□□□ -0.42
DDX41-212ENST00000511040 DDIT4LQ96D03 193 aa12.45□□□□□ -0.42
DDX41-212ENST00000511040 ZNF300Q96RE9 604 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms