RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 IGFBP7Q16270 282 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 RPS26P11Q5JNZ5 115 aaPredicted RBP5.53□□□□□ -1.52
SHQ1-205ENST00000468371 NXNL2Q5VZ03 156 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 CYHR1Q6ZMK1 362 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 SLC46A3Q7Z3Q1 461 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 FJX1Q86VR8 437 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 PIAS4Q8N2W9 510 aaPredicted RBP5.53□□□□□ -1.52
SHQ1-205ENST00000468371 ZNF740Q8NDX6 193 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 PDLIM5Q96HC4 596 aaKnown RBP5.53□□□□□ -1.52
SHQ1-205ENST00000468371 LRR1Q96L50 414 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 ZNF300Q96RE9 604 aaPredicted RBP5.53□□□□□ -1.52
SHQ1-205ENST00000468371 NIPSNAP1Q9BPW8 284 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 CPPED1Q9BRF8 314 aaPredicted RBP5.53□□□□□ -1.52
SHQ1-205ENST00000468371 ABCG5Q9H222 651 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 NANSQ9NR45 359 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 ENAMQ9NRM1 1142 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 SLC6A13Q9NSD5 602 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 RLIMQ9NVW2 624 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 SIDT1Q9NXL6 827 aaKnown RBP5.53□□□□□ -1.52
SHQ1-205ENST00000468371 TAS2R7Q9NYW3 318 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 MRPL15Q9P015 296 aaKnown RBP5.53□□□□□ -1.52
SHQ1-205ENST00000468371 DOCK4Q8N1I0 1966 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 NINQ8N4C6 2090 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 A0A1B0GUH1 482 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 C2orf92A0A1B0GVN3 265 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 BLACEA4D250 179 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 HMX3A6NHT5 357 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 FIGNL2A6NMB9 653 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 H3BSH0 61 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 SMAD9O15198 467 aaKnown RBP5.53□□□□□ -1.52
SHQ1-205ENST00000468371 SLC25A12O75746 678 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 RECKO95980 971 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 BMP7P18075 431 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 ATP5A1P25705 553 aaKnown RBP5.53□□□□□ -1.52
SHQ1-205ENST00000468371 SSTR2P30874 369 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 HSD17B7P56937 341 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 RAB38P57729 211 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 CDK10Q15131 360 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 FLYWCH1Q4VC44 716 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 XKR7Q5GH72 579 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 SLC35F1Q5T1Q4 408 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 KHDRBS2Q5VWX1 349 aaKnown RBP5.53□□□□□ -1.52
SHQ1-205ENST00000468371 B3GLCTQ6Y288 498 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 CXXC5Q7LFL8 322 aaKnown RBP5.53□□□□□ -1.52
SHQ1-205ENST00000468371 CDK20Q8IZL9 346 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 MFSD4AQ8N468 514 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 SAMD12Q8N8I0 201 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 ACOT4Q8N9L9 421 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 NEIL3Q8TAT5 605 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 PNPLA2Q96AD5 504 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 LMF1Q96S06 567 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 TMEM121BQ9BXQ6 578 aaPredicted RBP5.53□□□□□ -1.52
SHQ1-205ENST00000468371 SLC6A16Q9GZN6 736 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 SLIRPQ9GZT3 109 aaKnown RBP5.53□□□□□ -1.52
SHQ1-205ENST00000468371 DUSP21Q9H596 190 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 CLEC2DQ9UHP7 191 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 ZNF225Q9UK10 706 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 DKKL1Q9UK85 242 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 PCDHGA9Q9Y5G4 932 aaKnown RBP5.53□□□□□ -1.52
SHQ1-205ENST00000468371 SCO1O75880 301 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 OR7A10O76100 309 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 DKK1O94907 266 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 TSPAN12O95859 305 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 MAOAP21397 527 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 F8A1P23610 371 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 APEX1P27695 318 aaKnown RBP5.53□□□□□ -1.52
SHQ1-205ENST00000468371 PTGER1P34995 402 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 RNF144AP50876 292 aaPredicted RBP5.53□□□□□ -1.52
SHQ1-205ENST00000468371 PRKCDQ05655 676 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 TBCEQ15813 527 aaPredicted RBP5.53□□□□□ -1.52
SHQ1-205ENST00000468371 ZIC1Q15915 447 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 KLHL22Q53GT1 634 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 PLAG1Q6DJT9 500 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 ZNF585AQ6P3V2 769 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 CNIH2Q6PI25 160 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 BMPERQ8N8U9 685 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 EXD3Q8N9H8 876 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 OR5T3Q8NGG3 340 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 NRTNQ99748 197 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 PIP5K1AQ99755 562 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 VN1R1Q9GZP7 353 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 SLA2Q9H6Q3 261 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 NMNAT1Q9HAN9 279 aaPredicted RBP5.53□□□□□ -1.52
SHQ1-205ENST00000468371 ZCCHC3Q9NUD5 404 aaKnown RBP5.53□□□□□ -1.52
SHQ1-205ENST00000468371 PSORS1C1Q9UIG5 152 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 MGAT4AQ9UM21 535 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 STUB1Q9UNE7 303 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 BAIAP2Q9UQB8 552 aa5.53□□□□□ -1.52
SHQ1-205ENST00000468371 A0A1B0GW55 424 aa5.52□□□□□ -1.53
SHQ1-205ENST00000468371 A0A1W2PRG6 482 aa5.52□□□□□ -1.53
SHQ1-205ENST00000468371 GALR3O60755 368 aaPredicted RBP5.52□□□□□ -1.53
SHQ1-205ENST00000468371 LDB3O75112 727 aa5.52□□□□□ -1.53
SHQ1-205ENST00000468371 NCR1O76036 304 aa5.52□□□□□ -1.53
SHQ1-205ENST00000468371 ZIC2O95409 532 aaPredicted RBP5.52□□□□□ -1.53
SHQ1-205ENST00000468371 MSL3P1P0C860 447 aa5.52□□□□□ -1.53
SHQ1-205ENST00000468371 DUX4L2P0CJ85 424 aa5.52□□□□□ -1.53
SHQ1-205ENST00000468371 DUX4L3P0CJ86 424 aa5.52□□□□□ -1.53
SHQ1-205ENST00000468371 DUX4L4P0CJ87 422 aa5.52□□□□□ -1.53
SHQ1-205ENST00000468371 DUX4L5P0CJ88 424 aa5.52□□□□□ -1.53
SHQ1-205ENST00000468371 DUX4L6P0CJ89 424 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms