RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 PDX1P52945 283 aa14.38□□□□□ -0.11
CHD1L-205ENST00000467213 DUSP2Q05923 314 aa14.38□□□□□ -0.11
CHD1L-205ENST00000467213 MFSD12Q6NUT3 480 aa14.38□□□□□ -0.11
CHD1L-205ENST00000467213 ARHGAP11AQ6P4F7 1023 aa14.38□□□□□ -0.11
CHD1L-205ENST00000467213 LINC00518Q8N0U6 118 aa14.38□□□□□ -0.11
CHD1L-205ENST00000467213 TBX5Q99593 518 aa14.38□□□□□ -0.11
CHD1L-205ENST00000467213 MED20Q9H944 212 aa14.38□□□□□ -0.11
CHD1L-205ENST00000467213 MRPS7Q9Y2R9 242 aaKnown RBP14.38□□□□□ -0.11
CHD1L-205ENST00000467213 KCNK7Q9Y2U2 307 aa14.38□□□□□ -0.11
CHD1L-205ENST00000467213 ATG4BQ9Y4P1 393 aa14.38□□□□□ -0.11
CHD1L-205ENST00000467213 HRH3Q9Y5N1 445 aa14.38□□□□□ -0.11
CHD1L-205ENST00000467213 K7ESM1 405 aa14.38□□□□□ -0.11
CHD1L-205ENST00000467213 ARPC1BO15143 372 aaKnown RBP14.38□□□□□ -0.11
CHD1L-205ENST00000467213 TOXO94900 526 aa14.38□□□□□ -0.11
CHD1L-205ENST00000467213 NTN1O95631 604 aa14.38□□□□□ -0.11
CHD1L-205ENST00000467213 IFNGP01579 166 aa14.38□□□□□ -0.11
CHD1L-205ENST00000467213 HRGP04196 525 aa14.38□□□□□ -0.11
CHD1L-205ENST00000467213 LPLP06858 475 aa14.38□□□□□ -0.11
CHD1L-205ENST00000467213 H2AFB1P0C5Y9 115 aa14.38□□□□□ -0.11
CHD1L-205ENST00000467213 RPA2P15927 270 aa14.38□□□□□ -0.11
CHD1L-205ENST00000467213 NDUFS1P28331 727 aa14.38□□□□□ -0.11
CHD1L-205ENST00000467213 ACVR1BP36896 505 aa14.38□□□□□ -0.11
CHD1L-205ENST00000467213 PPP2CBP62714 309 aa14.38□□□□□ -0.11
CHD1L-205ENST00000467213 PPP2CAP67775 309 aa14.38□□□□□ -0.11
CHD1L-205ENST00000467213 SREBF2Q12772 1141 aa14.38□□□□□ -0.11
CHD1L-205ENST00000467213 CDH26Q8IXH8 852 aa14.38□□□□□ -0.11
CHD1L-205ENST00000467213 CAMKVQ8NCB2 501 aa14.38□□□□□ -0.11
CHD1L-205ENST00000467213 DNAAF1Q8NEP3 725 aa14.38□□□□□ -0.11
CHD1L-205ENST00000467213 OR52I2Q8NH67 350 aa14.38□□□□□ -0.11
CHD1L-205ENST00000467213 ZNF671Q8TAW3 534 aa14.38□□□□□ -0.11
CHD1L-205ENST00000467213 CNOT9Q92600 299 aaKnown RBP14.38□□□□□ -0.11
CHD1L-205ENST00000467213 SLC25A38Q96DW6 304 aa14.38□□□□□ -0.11
CHD1L-205ENST00000467213 DPH1Q9BZG8 443 aa14.38□□□□□ -0.11
CHD1L-205ENST00000467213 OPN4Q9UHM6 478 aa14.38□□□□□ -0.11
CHD1L-205ENST00000467213 ERAL1O75616 437 aaKnown RBP14.37□□□□□ -0.11
CHD1L-205ENST00000467213 DBIP07108 87 aaKnown RBP14.37□□□□□ -0.11
CHD1L-205ENST00000467213 MC3RP41968 323 aa14.37□□□□□ -0.11
CHD1L-205ENST00000467213 RAD52P43351 418 aa14.37□□□□□ -0.11
CHD1L-205ENST00000467213 ZNF613Q6PF04 617 aa14.37□□□□□ -0.11
CHD1L-205ENST00000467213 APOOLQ6UXV4 268 aa14.37□□□□□ -0.11
CHD1L-205ENST00000467213 LINGO2Q7L985 606 aa14.37□□□□□ -0.11
CHD1L-205ENST00000467213 PRSS45Q7RTY3 260 aa14.37□□□□□ -0.11
CHD1L-205ENST00000467213 SLC36A1Q7Z2H8 476 aa14.37□□□□□ -0.11
CHD1L-205ENST00000467213 HMGN2P46Q86SG4 172 aa14.37□□□□□ -0.11
CHD1L-205ENST00000467213 OR4C6Q8NH72 309 aa14.37□□□□□ -0.11
CHD1L-205ENST00000467213 PCNPQ8WW12 178 aaKnown RBP14.37□□□□□ -0.11
CHD1L-205ENST00000467213 RIT1Q92963 219 aa14.37□□□□□ -0.11
CHD1L-205ENST00000467213 FBXW5Q969U6 566 aa14.37□□□□□ -0.11
CHD1L-205ENST00000467213 HAVCR1Q96D42 359 aa14.37□□□□□ -0.11
CHD1L-205ENST00000467213 PELI1Q96FA3 418 aa14.37□□□□□ -0.11
CHD1L-205ENST00000467213 S100A16Q96FQ6 103 aaKnown RBP14.37□□□□□ -0.11
CHD1L-205ENST00000467213 CXorf58Q96LI9 332 aa14.37□□□□□ -0.11
CHD1L-205ENST00000467213 OR10A4Q9H209 315 aa14.37□□□□□ -0.11
CHD1L-205ENST00000467213 TTYH1Q9H313 450 aaPredicted RBP14.37□□□□□ -0.11
CHD1L-205ENST00000467213 ZNF780BQ9Y6R6 833 aa14.37□□□□□ -0.11
CHD1L-205ENST00000467213 IGKV1-8A0A0C4DH67 115 aa14.37□□□□□ -0.11
CHD1L-205ENST00000467213 MID1O15344 667 aa14.37□□□□□ -0.11
CHD1L-205ENST00000467213 RNGTTO60942 597 aaKnown RBP14.37□□□□□ -0.11
CHD1L-205ENST00000467213 PCDH8O95206 1070 aa14.37□□□□□ -0.11
CHD1L-205ENST00000467213 HPP00738 406 aa14.37□□□□□ -0.11
CHD1L-205ENST00000467213 LRG1P02750 347 aa14.37□□□□□ -0.11
CHD1L-205ENST00000467213 C6P13671 934 aa14.37□□□□□ -0.11
CHD1L-205ENST00000467213 SRMP19623 302 aa14.37□□□□□ -0.11
CHD1L-205ENST00000467213 CFPP27918 469 aa14.37□□□□□ -0.11
CHD1L-205ENST00000467213 FAUP35544 74 aaKnown RBP14.37□□□□□ -0.11
CHD1L-205ENST00000467213 GMFBP60983 142 aa14.37□□□□□ -0.11
CHD1L-205ENST00000467213 STXBP1P61764 594 aaKnown RBP14.37□□□□□ -0.11
CHD1L-205ENST00000467213 ZNF169Q14929 603 aaPredicted RBP14.37□□□□□ -0.11
CHD1L-205ENST00000467213 SFRP4Q6FHJ7 346 aaPredicted RBP14.37□□□□□ -0.11
CHD1L-205ENST00000467213 LRRTM4Q86VH4 590 aa14.37□□□□□ -0.11
CHD1L-205ENST00000467213 OR1S1Q8NH92 325 aa14.37□□□□□ -0.11
CHD1L-205ENST00000467213 POF1BQ8WVV4 589 aa14.37□□□□□ -0.11
CHD1L-205ENST00000467213 ZNF416Q9BWM5 594 aa14.37□□□□□ -0.11
CHD1L-205ENST00000467213 ZNF350Q9GZX5 532 aa14.37□□□□□ -0.11
CHD1L-205ENST00000467213 CA10Q9NS85 328 aa14.37□□□□□ -0.11
CHD1L-205ENST00000467213 FLVCR2Q9UPI3 526 aa14.37□□□□□ -0.11
CHD1L-205ENST00000467213 FOXJ3Q9UPW0 622 aa14.37□□□□□ -0.11
CHD1L-205ENST00000467213 NTNG1Q9Y2I2 539 aa14.37□□□□□ -0.11
CHD1L-205ENST00000467213 PRELID3BQ9Y3B1 194 aa14.37□□□□□ -0.11
CHD1L-205ENST00000467213 WDR45Q9Y484 360 aa14.37□□□□□ -0.11
CHD1L-205ENST00000467213 MYO10Q9HD67 2058 aa14.36□□□□□ -0.11
CHD1L-205ENST00000467213 ZC3H12DA2A288 527 aaKnown RBP14.36□□□□□ -0.11
CHD1L-205ENST00000467213 KPNA3O00505 521 aaPredicted RBP14.36□□□□□ -0.11
CHD1L-205ENST00000467213 FCMRO60667 390 aa14.36□□□□□ -0.11
CHD1L-205ENST00000467213 MELTFP08582 738 aa14.36□□□□□ -0.11
CHD1L-205ENST00000467213 CLTBP09497 229 aa14.36□□□□□ -0.11
CHD1L-205ENST00000467213 HOXB3P14651 431 aaPredicted RBP14.36□□□□□ -0.11
CHD1L-205ENST00000467213 PRKACAP17612 351 aa14.36□□□□□ -0.11
CHD1L-205ENST00000467213 RBM34P42696 430 aaKnown RBP14.36□□□□□ -0.11
CHD1L-205ENST00000467213 TMEM255AQ5JRV8 349 aa14.36□□□□□ -0.11
CHD1L-205ENST00000467213 GSG1LQ6UXU4 331 aa14.36□□□□□ -0.11
CHD1L-205ENST00000467213 UBE2Q1Q7Z7E8 422 aa14.36□□□□□ -0.11
CHD1L-205ENST00000467213 NRROSQ86YC3 692 aa14.36□□□□□ -0.11
CHD1L-205ENST00000467213 CLRN3Q8NCR9 226 aa14.36□□□□□ -0.11
CHD1L-205ENST00000467213 PAWRQ96IZ0 340 aaKnown RBP14.36□□□□□ -0.11
CHD1L-205ENST00000467213 PCDHB16Q9NRJ7 776 aa14.36□□□□□ -0.11
CHD1L-205ENST00000467213 TAS2R8Q9NYW2 309 aa14.36□□□□□ -0.11
CHD1L-205ENST00000467213 IRAK3Q9Y616 596 aa14.36□□□□□ -0.11
CHD1L-205ENST00000467213 COL4A2P08572 1712 aa14.36□□□□□ -0.11
CHD1L-205ENST00000467213 A0A1W2PRU2 124 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms