RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 EFNA1P20827 205 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 UQCRC2P22695 453 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 FCARP24071 287 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 IGFBP5P24593 272 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 TLX1P31314 330 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 CHI3L1P36222 383 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 CRATP43155 626 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 TNFRSF4P43489 277 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 AMTP48728 403 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 CENPAP49450 140 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 DAPP51397 102 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 CCR8P51685 355 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 LBX1P52954 281 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 TMBIM6P55061 237 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 CDH12P55289 794 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 CXCR4P61073 352 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 TRA2BP62995 288 aaKnown RBP3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 SELENOWP63302 87 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 CSNK2BP67870 215 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 HBA1P69905 142 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 KCNJ10P78508 379 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 VLDLRP98155 873 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 CDK3Q00526 305 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 IL5RAQ01344 420 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 IL1RL1Q01638 556 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 FCHO2Q0JRZ9 810 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 FADDQ13158 208 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 SGCGQ13326 291 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 CAMK2DQ13557 499 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 ENPP2Q13822 863 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 IL11RAQ14626 422 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 C16orf72Q14CZ0 275 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 HEPACAMQ14CZ8 416 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 NPTX1Q15818 432 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 CST6Q15828 149 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 HSPB2Q16082 182 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 ZNF630Q2M218 657 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 WSCD2Q2TBF2 565 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 IFI44LQ53G44 452 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 GPR107Q5VW38 600 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 KHDRBS2Q5VWX1 349 aaKnown RBP3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 AP1ARQ63HQ0 302 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 SPSB3Q6PJ21 355 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 DHRS4L2Q6PKH6 230 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 ANGPTL8Q6UXH0 198 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 VITQ6UXI7 678 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 QSOX2Q6ZRP7 698 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 RBPMS2Q6ZRY4 209 aaKnown RBP3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 CCDC80Q76M96 950 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 GET4Q7L5D6 327 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 PAGE2Q7Z2X7 111 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 VTCN1Q7Z7D3 282 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 SLC9B2Q86UD5 537 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 FJX1Q86VR8 437 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 NR2C2APQ86WQ0 139 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 HS3ST5Q8IZT8 346 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 HDDC3Q8N4P3 179 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 RAB42Q8N4Z0 105 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 HORMAD2Q8N7B1 307 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 LMNTD1Q8N9Z9 388 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 TTC29Q8NA56 475 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 CHDHQ8NE62 594 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 BPIFB6Q8NFQ5 453 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 OR4K1Q8NGD4 311 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 OR5AR1Q8NGP9 310 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 OR13F1Q8NGS4 319 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 OR5K2Q8NHB8 316 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 SPPL2AQ8TCT8 520 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 GIPC3Q8TF64 312 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 OR5P2Q8WZ92 322 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 LZICQ8WZA0 190 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 SMPDL3AQ92484 453 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 OTULINQ96BN8 352 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 ISOC1Q96CN7 298 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 C7orf34Q96L11 122 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 IL17FQ96PD4 163 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 BBS4Q96RK4 519 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 NODALQ96S42 347 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 EPYCQ99645 322 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 DOK1Q99704 481 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 APOL4Q9BPW4 351 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 AIF1LQ9BQI0 150 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 SLC35A5Q9BS91 424 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 NLNQ9BYT8 704 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 PLA2G2FQ9BZM2 168 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 HRH4Q9H3N8 390 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 RIBC2Q9H4K1 309 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 TMEM38AQ9H6F2 299 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 LIN28AQ9H9Z2 209 aaKnown RBP3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 FANCEQ9HB96 536 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 PLGRKTQ9HBL7 147 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 ZNF304Q9HCX3 659 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 MIEF1Q9NQG6 463 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 MBNL1Q9NR56 388 aaKnown RBP3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 PHPT1Q9NRX4 125 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 THUMPD1Q9NXG2 353 aaKnown RBP3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 SCN3BQ9NY72 215 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 VNN3Q9NY84 501 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 TAS2R9Q9NYW1 312 aa3.16□□□□□ -1.9
HMGB3P11-201ENST00000440127 TMEM9Q9P0T7 183 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms