RNA–Protein interactions for RNA: ENST00000431533.6

RPL28-204, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-204ENST00000431533 TMEM201Q5SNT2 666 aa13.67□□□□□ -0.22
RPL28-204ENST00000431533 GTF2IRD2BQ6EKJ0 949 aa13.67□□□□□ -0.22
RPL28-204ENST00000431533 FCRLAQ7L513 359 aa13.67□□□□□ -0.22
RPL28-204ENST00000431533 GTF2IRD2Q86UP8 949 aa13.67□□□□□ -0.22
RPL28-204ENST00000431533 VRK2Q86Y07 508 aa13.67□□□□□ -0.22
RPL28-204ENST00000431533 PEX5LQ8IYB4 626 aa13.67□□□□□ -0.22
RPL28-204ENST00000431533 RNF128Q8TEB7 428 aa13.67□□□□□ -0.22
RPL28-204ENST00000431533 OIT3Q8WWZ8 545 aa13.67□□□□□ -0.22
RPL28-204ENST00000431533 SPDL1Q96EA4 605 aa13.67□□□□□ -0.22
RPL28-204ENST00000431533 PAIP1Q9H074 479 aaKnown RBP13.67□□□□□ -0.22
RPL28-204ENST00000431533 MTHFD2LQ9H903 347 aaPredicted RBP13.67□□□□□ -0.22
RPL28-204ENST00000431533 CTPS2Q9NRF8 586 aa13.67□□□□□ -0.22
RPL28-204ENST00000431533 DCTN4Q9UJW0 460 aa13.67□□□□□ -0.22
RPL28-204ENST00000431533 TMEM247A6NEH6 219 aa13.66□□□□□ -0.22
RPL28-204ENST00000431533 TRIM64A6NGJ6 449 aa13.66□□□□□ -0.22
RPL28-204ENST00000431533 TRIM64BA6NI03 449 aa13.66□□□□□ -0.22
RPL28-204ENST00000431533 AGAP5A6NIR3 686 aa13.66□□□□□ -0.22
RPL28-204ENST00000431533 KIAA1324LA8MWY0 1029 aaPredicted RBP13.66□□□□□ -0.22
RPL28-204ENST00000431533 INAFM1C9JVW0 142 aa13.66□□□□□ -0.22
RPL28-204ENST00000431533 CLIC1O00299 241 aa13.66□□□□□ -0.22
RPL28-204ENST00000431533 SIAH2O43255 324 aa13.66□□□□□ -0.22
RPL28-204ENST00000431533 DBIP07108 87 aaKnown RBP13.66□□□□□ -0.22
RPL28-204ENST00000431533 NCF2P19878 526 aaPredicted RBP13.66□□□□□ -0.22
RPL28-204ENST00000431533 ENPP1P22413 925 aa13.66□□□□□ -0.22
RPL28-204ENST00000431533 CRISP3P54108 245 aa13.66□□□□□ -0.22
RPL28-204ENST00000431533 MRPL2Q5T653 305 aaKnown RBP13.66□□□□□ -0.22
RPL28-204ENST00000431533 STK32CQ86UX6 486 aa13.66□□□□□ -0.22
RPL28-204ENST00000431533 FUNDC1Q8IVP5 155 aa13.66□□□□□ -0.22
RPL28-204ENST00000431533 OR52P1PQ8NH57 321 aa13.66□□□□□ -0.22
RPL28-204ENST00000431533 TMEM19Q96HH6 336 aa13.66□□□□□ -0.22
RPL28-204ENST00000431533 MDFIQ99750 246 aa13.66□□□□□ -0.22
RPL28-204ENST00000431533 CACYBPQ9HB71 228 aaKnown RBP13.66□□□□□ -0.22
RPL28-204ENST00000431533 NPHS2Q9NP85 383 aa13.66□□□□□ -0.22
RPL28-204ENST00000431533 EXOSC3Q9NQT5 275 aaKnown RBP13.66□□□□□ -0.22
RPL28-204ENST00000431533 GLRX2Q9NS18 164 aa13.66□□□□□ -0.22
RPL28-204ENST00000431533 CALML5Q9NZT1 146 aa13.66□□□□□ -0.22
RPL28-204ENST00000431533 PCDHB14Q9Y5E9 798 aa13.66□□□□□ -0.22
RPL28-204ENST00000431533 CSPG4Q6UVK1 2322 aa13.65□□□□□ -0.22
RPL28-204ENST00000431533 DNAJA2O60884 412 aa13.65□□□□□ -0.22
RPL28-204ENST00000431533 ADAM11O75078 769 aa13.65□□□□□ -0.22
RPL28-204ENST00000431533 PRKD3O94806 890 aa13.65□□□□□ -0.22
RPL28-204ENST00000431533 NUDT7P0C024 238 aa13.65□□□□□ -0.22
RPL28-204ENST00000431533 NID1P14543 1247 aa13.65□□□□□ -0.22
RPL28-204ENST00000431533 RPS4Y1P22090 263 aaKnown RBP13.65□□□□□ -0.22
RPL28-204ENST00000431533 SQLEQ14534 574 aa13.65□□□□□ -0.22
RPL28-204ENST00000431533 RNPS1Q15287 305 aaKnown RBP13.65□□□□□ -0.22
RPL28-204ENST00000431533 MAPK11Q15759 364 aa13.65□□□□□ -0.22
RPL28-204ENST00000431533 SYT14P1Q58G82 188 aa13.65□□□□□ -0.22
RPL28-204ENST00000431533 BLOC1S3Q6QNY0 202 aa13.65□□□□□ -0.22
RPL28-204ENST00000431533 ZNF836Q6ZNA1 936 aa13.65□□□□□ -0.22
RPL28-204ENST00000431533 CXXC5Q7LFL8 322 aaKnown RBP13.65□□□□□ -0.22
RPL28-204ENST00000431533 NUFIP2Q7Z417 695 aaKnown RBP13.65□□□□□ -0.22
RPL28-204ENST00000431533 GRINAQ7Z429 371 aa13.65□□□□□ -0.22
RPL28-204ENST00000431533 TUSC5Q8IXB3 177 aa13.65□□□□□ -0.22
RPL28-204ENST00000431533 SLC38A5Q8WUX1 472 aa13.65□□□□□ -0.22
RPL28-204ENST00000431533 REPIN1Q9BWE0 567 aaKnown RBP13.65□□□□□ -0.22
RPL28-204ENST00000431533 OR11A1Q9GZK7 315 aa13.65□□□□□ -0.22
RPL28-204ENST00000431533 RAD21L1Q9H4I0 556 aa13.65□□□□□ -0.22
RPL28-204ENST00000431533 PLSCR4Q9NRQ2 329 aa13.65□□□□□ -0.22
RPL28-204ENST00000431533 RLIMQ9NVW2 624 aa13.65□□□□□ -0.22
RPL28-204ENST00000431533 SPIN1Q9Y657 262 aaPredicted RBP13.65□□□□□ -0.22
RPL28-204ENST00000431533 TLN2Q9Y4G6 2542 aa13.64□□□□□ -0.23
RPL28-204ENST00000431533 A0A096LPI6 279 aa13.64□□□□□ -0.23
RPL28-204ENST00000431533 SULT2B1O00204 365 aa13.64□□□□□ -0.23
RPL28-204ENST00000431533 ETV2O00321 342 aaPredicted RBP13.64□□□□□ -0.23
RPL28-204ENST00000431533 FESP07332 822 aa13.64□□□□□ -0.23
RPL28-204ENST00000431533 TFPTP0C1Z6 253 aa13.64□□□□□ -0.23
RPL28-204ENST00000431533 GKN3PP0CG01 181 aa13.64□□□□□ -0.23
RPL28-204ENST00000431533 APOBEC1P41238 236 aaKnown RBP13.64□□□□□ -0.23
RPL28-204ENST00000431533 MAGEA8P43361 318 aa13.64□□□□□ -0.23
RPL28-204ENST00000431533 MRPL19P49406 292 aaKnown RBP13.64□□□□□ -0.23
RPL28-204ENST00000431533 DIO1P49895 249 aa13.64□□□□□ -0.23
RPL28-204ENST00000431533 ATP5J2P56134 94 aa13.64□□□□□ -0.23
RPL28-204ENST00000431533 RAC3P60763 192 aa13.64□□□□□ -0.23
RPL28-204ENST00000431533 SF3A3Q12874 501 aaKnown RBP eCLIP13.64□□□□□ -0.232e-6■■□□□ 13.6
RPL28-204ENST00000431533 RGNQ15493 299 aa13.64□□□□□ -0.23
RPL28-204ENST00000431533 ETFDHQ16134 617 aa13.64□□□□□ -0.23
RPL28-204ENST00000431533 LIN52Q52LA3 116 aa13.64□□□□□ -0.23
RPL28-204ENST00000431533 PAGE3Q5JUK9 113 aa13.64□□□□□ -0.23
RPL28-204ENST00000431533 ZNF704Q6ZNC4 412 aaPredicted RBP13.64□□□□□ -0.23
RPL28-204ENST00000431533 BEND4Q6ZU67 534 aa13.64□□□□□ -0.23
RPL28-204ENST00000431533 CMIPQ8IY22 773 aa13.64□□□□□ -0.23
RPL28-204ENST00000431533 SLC25A43Q8WUT9 341 aaPredicted RBP13.64□□□□□ -0.23
RPL28-204ENST00000431533 MAL2Q969L2 176 aa13.64□□□□□ -0.23
RPL28-204ENST00000431533 ZNF775Q96BV0 537 aaPredicted RBP13.64□□□□□ -0.23
RPL28-204ENST00000431533 CCDC106Q9BWC9 280 aa13.64□□□□□ -0.23
RPL28-204ENST00000431533 OR10A4Q9H209 315 aa13.64□□□□□ -0.23
RPL28-204ENST00000431533 SLAMF8Q9P0V8 285 aa13.64□□□□□ -0.23
RPL28-204ENST00000431533 KLHL13Q9P2N7 655 aa13.64□□□□□ -0.23
RPL28-204ENST00000431533 CHRNA9Q9UGM1 479 aa13.64□□□□□ -0.23
RPL28-204ENST00000431533 ZNF443Q9Y2A4 671 aaPredicted RBP13.64□□□□□ -0.23
RPL28-204ENST00000431533 TMED7-TICAM2A0A0A6YYA0 188 aa13.63□□□□□ -0.23
RPL28-204ENST00000431533 A0A0G2JND7 137 aa13.63□□□□□ -0.23
RPL28-204ENST00000431533 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.63□□□□□ -0.23
RPL28-204ENST00000431533 CFAP73A6NFT4 308 aa13.63□□□□□ -0.23
RPL28-204ENST00000431533 C5orf58C9J3I9 102 aa13.63□□□□□ -0.23
RPL28-204ENST00000431533 SMAD9O15198 467 aaKnown RBP13.63□□□□□ -0.23
RPL28-204ENST00000431533 EDF1O60869 148 aaKnown RBP13.63□□□□□ -0.23
RPL28-204ENST00000431533 UQCRBP14927 111 aa13.63□□□□□ -0.23
RPL28-204ENST00000431533 ATP4BP51164 291 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms