RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 ARG2P78540 354 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 FOXF1Q12946 379 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 EIPR1Q53HC9 387 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 CLEC12AQ5QGZ9 265 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 AGAP7PQ5VUJ5 663 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 OTPQ5XKR4 325 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 SLC22A10Q63ZE4 541 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 H3F3CQ6NXT2 135 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 ZNF773Q6PK81 442 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 ZER1Q7Z7L7 766 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 SULF2Q8IWU5 870 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 UBQLNLQ8IYU4 475 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 OR4C15Q8NGM1 316 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 C3orf49Q96BT1 292 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 KTI12Q96EK9 354 aaPredicted RBP8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 ABHD17AQ96GS6 310 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 AGAP4Q96P64 663 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 MOGAT1Q96PD6 335 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 DPH1Q9BZG8 443 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 PLA2G12AQ9BZM1 189 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 PLGRKTQ9HBL7 147 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 GALNT8Q9NY28 637 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 PPP4R1LQ9P1A2 415 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 TMEFF2Q9UIK5 374 aaPredicted RBP8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 POLHQ9Y253 713 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 CSMD2Q7Z408 3487 aa8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 ZNF462Q96JM2 2506 aa8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 TRAV27A0A087WT01 109 aa8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 TRAPPC6AO75865 159 aa8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 AK1P00568 194 aa8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 H1F0P07305 194 aaKnown RBP8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 THRBP10828 461 aa8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 MAKP20794 623 aa8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 MAGEA5P43359 124 aa8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 RPS5P46782 204 aaKnown RBP8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 HSF1Q00613 529 aa8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 ALDH6A1Q02252 535 aaKnown RBP8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 EGR4Q05215 589 aa8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 EPS8Q12929 822 aa8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 MEP1AQ16819 746 aa8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 UNQ6494/PRO21346Q6UXR6 183 aa8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 BCDIN3DQ7Z5W3 292 aaKnown RBP8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 ATG16L2Q8NAA4 619 aa8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 ZNF527Q8NB42 609 aa8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 C17orf47Q8NEP4 570 aa8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 OR4K5Q8NGD3 323 aa8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 OR13F1Q8NGS4 319 aa8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 OR51A7Q8NH64 312 aa8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 ZNF775Q96BV0 537 aaPredicted RBP8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 TMCO6Q96DC7 493 aa8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 FER1L6-AS2Q96M78 137 aa8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 MUS81Q96NY9 551 aa8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 KLHL28Q9NXS3 571 aa8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 USE1Q9NZ43 259 aa8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 SLC6A5Q9Y345 797 aa8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 IGKV1D-42A0A075B6H8 117 aa8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 A0A1W2PNR3 127 aa8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 LRRC3CA6NJW4 275 aa8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 ZNF891A8MT65 544 aaPredicted RBP8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 CH25HO95992 272 aa8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 ICAM2P13598 275 aa8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 RHCEP18577 417 aa8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 PSMD4P55036 377 aaKnown RBP8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 WIPI1Q5MNZ9 446 aaPredicted RBP8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 RBM48Q5RL73 367 aaKnown RBP8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 OPN5Q6U736 354 aa8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 ZDHHC13Q8IUH4 622 aa8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 FAM71CQ8NEG0 241 aa8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 OR10G2Q8NGC3 310 aa8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 FNDC8Q8TC99 324 aa8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 PAQR8Q8TEZ7 354 aa8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 UTP23Q9BRU9 249 aaKnown RBP8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 MAGIXQ9H6Y5 334 aa8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 SH2D2AQ9NP31 389 aa8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 OSGIN1Q9UJX0 560 aa8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 LIPGQ9Y5X9 500 aa8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 DIDO1Q9BTC0 2240 aaKnown RBP8.63□□□□□ -1.03
HMGCLL1-206ENST00000428842 IGHV3-15A0A0B4J1V0 119 aa8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 A0A0B4J2E0 115 aa8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 A0A1B0GX12 115 aa8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 SEC14L2O76054 403 aa8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 SDHBP21912 280 aa8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 ELK4P28324 431 aa8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 LIMS1P48059 325 aa8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 ENTPD1P49961 510 aa8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 PPP2R2BQ00005 443 aa8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 CRYZQ08257 329 aaKnown RBP8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 GPR107Q5VW38 600 aa8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 ZNF730Q6ZMV8 503 aa8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 THAP5Q7Z6K1 395 aa8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 WDFY1Q8IWB7 410 aa8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 SVOPLQ8N434 492 aa8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 POC1BQ8TC44 478 aa8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 SLC25A36Q96CQ1 311 aa8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 PRRC1Q96M27 445 aa8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 MBOAT4Q96T53 435 aa8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 OSBPL10Q9BXB5 764 aa8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 DEFB127Q9H1M4 99 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms